Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400025561
CDS Infomation

pacid=37474420 polypeptide=PGSC0003DMP400017412 locus=PGSC0003DMG400009877 ID=PGSC0003DMT400025561.v4.03 annot-version=v4.03
Sequence

ATGAGGAGAGTCAGTAGAATCGCCGCCTTATACCGGGCAGTGGATGGTGCAGCCGCCGTG
GAGGTGCCGCAGCATCGGATGTCTACGGCGGCTCAGTTTAGCACGAGCAGCAACAAATCA
TCTGCCAAGTCTAACTGGTTATTCAACAATTTGCTCACGGATCTATCTGCTAGAACCGCA
GCTCATGCTGTTGCTGGAACAATGCTTTTCTCGGTGGCGGCAACCACGTTGACCGACGAA
GTCCACGCTAAAGAAGCAGTGCCACCGGAATTACGCCCAAAAGATCTTGTCCTTTATCAG
TATGAAGCTTGTCCTTTCTGTAACAAGGTTAAAGCATTCCTCGACTACTATGACTTACCA
TACAAGATCATTGAGGTCAATCCCATCAGCAAAAAAGAACTCAAGTGGTCTGATTATAAG
AAAGTGCCTGTTGTGTTGGTTGATGGTGAACAGATGGTGAACTCATCAGATATTATTGAT
AAATTATACGAGAAGGTTCGTTCTGGTGATTCTACCTTTGATGCCGATGAAGAGAGCAAA
TGGCGCAAGTGGGTGGATGATCACTTGGTGCACATGTTATCACCTAACATATACCGAAAT
ACCTCAGAAGCTCTTGAATCGTTCGATTACATAACTAGTCATGGTAATTTCAGCTTTACG
GAGAGAATAACTGCCAAATATGCTGGAGCTGCAGCCATGTATTTTGTTTCGAAGAAATTG
AAGAAGAAATATAATATTACAGATGAGCGTGCATCCCTGTATGAAGCTGCAGAAACATGG
GTTGATGCTCTCAAGGGCCGAGACTTTCTTGGTGGTTCTAAACCAAACTTAGCAGATCTT
GCTGTATATGGCGTTTTGAGACCCATTCGCTATCTGAAATCTGGTAGAGACATGGTGGAG
AACACACGTATTGGTGATTGGTACTCTCGGATGGAAAGTGAAGTAGGCGTGTCTGCTAGA
ATTCAAGCTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400017412
PEP Infomation

pacid=37474420 transcript=PGSC0003DMT400025561 locus=PGSC0003DMG400009877 ID=PGSC0003DMT400025561.v4.03 annot-version=v4.03
Sequence

MRRVSRIAALYRAVDGAAAVEVPQHRMSTAAQFSTSSNKSSAKSNWLFNNLLTDLSARTA
AHAVAGTMLFSVAATTLTDEVHAKEAVPPELRPKDLVLYQYEACPFCNKVKAFLDYYDLP
YKIIEVNPISKKELKWSDYKKVPVVLVDGEQMVNSSDIIDKLYEKVRSGDSTFDADEESK
WRKWVDDHLVHMLSPNIYRNTSEALESFDYITSHGNFSFTERITAKYAGAAAMYFVSKKL
KKKYNITDERASLYEAAETWVDALKGRDFLGGSKPNLADLAVYGVLRPIRYLKSGRDMVE
NTRIGDWYSRMESEVGVSARIQA*

Transcript Sequence

Transcript ID

PGSC0003DMT400025561
Transcript Infomation

pacid=37474420 locus=PGSC0003DMG400009877 ID=PGSC0003DMT400025561.v4.03 annot-version=v4.03
Sequence

ATGAGGAGAGTCAGTAGAATCGCCGCCTTATACCGGGCAGTGGATGGTGCAGCCGCCGTG
GAGGTGCCGCAGCATCGGATGTCTACGGCGGCTCAGTTTAGCACGAGCAGCAACAAATCA
TCTGCCAAGTCTAACTGGTTATTCAACAATTTGCTCACGGATCTATCTGCTAGAACCGCA
GCTCATGCTGTTGCTGGAACAATGCTTTTCTCGGTGGCGGCAACCACGTTGACCGACGAA
GTCCACGCTAAAGAAGCAGTGCCACCGGAATTACGCCCAAAAGATCTTGTCCTTTATCAG
TATGAAGCTTGTCCTTTCTGTAACAAGGTTAAAGCATTCCTCGACTACTATGACTTACCA
TACAAGATCATTGAGGTCAATCCCATCAGCAAAAAAGAACTCAAGTGGTCTGATTATAAG
AAAGTGCCTGTTGTGTTGGTTGATGGTGAACAGATGGTGAACTCATCAGATATTATTGAT
AAATTATACGAGAAGGTTCGTTCTGGTGATTCTACCTTTGATGCCGATGAAGAGAGCAAA
TGGCGCAAGTGGGTGGATGATCACTTGGTGCACATGTTATCACCTAACATATACCGAAAT
ACCTCAGAAGCTCTTGAATCGTTCGATTACATAACTAGTCATGGTAATTTCAGCTTTACG
GAGAGAATAACTGCCAAATATGCTGGAGCTGCAGCCATGTATTTTGTTTCGAAGAAATTG
AAGAAGAAATATAATATTACAGATGAGCGTGCATCCCTGTATGAAGCTGCAGAAACATGG
GTTGATGCTCTCAAGGGCCGAGACTTTCTTGGTGGTTCTAAACCAAACTTAGCAGATCTT
GCTGTATATGGCGTTTTGAGACCCATTCGCTATCTGAAATCTGGTAGAGACATGGTGGAG
AACACACGTATTGGTGATTGGTACTCTCGGATGGAAAGTGAAGTAGGCGTGTCTGCTAGA
ATTCAAGCTTAA