Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400025540
CDS Infomation

pacid=37473197 polypeptide=PGSC0003DMP400017393 locus=PGSC0003DMG400009867 ID=PGSC0003DMT400025540.v4.03 annot-version=v4.03
Sequence

ATGGGAGGTGTTTGTACAGGTGGAACAGCGAGGAGTAGAGTTGAAATTCACCATGAGAGC
CCCTCAGGGTCTTCAAAAAAGATGGAGTCAGTTGAGAGCATTGGAAAGCAGAAGAAAGAT
GAATCTTTTTCGTATCCTGATGTGGGTGCTTTTCGTGGGACGCCTAATCTATATGATTCT
GGTGAATTGTATATGTCTATTTCGAGGGAGTTGAAGCCATCGACACCTGCTAGGACAGGA
GTGAACAAGGTTCCTAGCTCTTTTCTTGGGAAGGCCAGTATAGTCGGCCTAGAGAAAGCA
GTTGAAGTATTAGATACACTTGGGAGCAGCATGACAAATTTGAACTCCGGAGGCTTTATG
ACTGGAATGACATCAAGAGGGAATAAAATAGCTATCCTAGCATTTGAGGTAGCGAATACT
ATTACCAAAGGTGCAAATTTGTTGCAATCTCTTTCCAAAGAAAATGTCGAGTATTTAAAG
AAGGAAATTCTACCTTCAAAAGGAGTGCAACAATTGGTTTCTACTAATATGAAGGAGCTG
CTTACTATTGCTGCTGCCGACAAAAGGGAGGAATTTGACATCTTCTCTCGCGAAGTGATT
AGGTTTGGAGATATGTGTAAAGACCCTCAATGGCACAACCTAAATCGATATTTTTCCAGG
TTGGACTCAGACACTCTTACCCACAAACAGCTAAGATCAGAGGCTGAATTGATGATGCAG
GAACTGAGCACTCTGGCTCAGCATACTTCTGAATTATATCACGAACTGCACGCACTGGAC
AGATTCGAACAGGATTATCGGAGGAAACTTGAGGAATTAGATTCCTTAAATCTACCTCGA
AAAGGTGAAGGTCTCATGATGTTACAGAGTGAACTAAAACATCAAAGAAAGATTGCGAGG
AGCTTGAAAAAGAAATCTCTTTGGGCTAAGGGTTTGGAGGAGGTTGTGGAGAAGCTTGTT
GACATTGTTACTTATATACATCAAGCAATTGTGGAAGCATTTGGGGACAATGGATTGACA
TCTGCTGTCAAGGAGCCAGTGAAGAAACAAGAAAGACTGGGAGTAGCTGGTCTGGCTTTA
CACTATGCTAACTTAGTTACTCAAATTGATAACATTGCTTCACGGCCCACCTCTCTTCCG
CCTAACATGAGGGATGGATTATATAATGGATTACCTCCTTCCATAAAAACGGCCCTTCGT
TCACGTCTGCAGGCGGTTGATGCAAAGGAAGAGCTCACAATTCCTCAGATTAAAGCAGAG
ATGGAAAAAACTCTTCAGTGGCTTGTCCCAGTAGCTGCAGATACTACGAAAGCACACCAA
GGCTTTGGATGGGTTGGAGAGTGGGCCAACACCGGAAGCGAGTTTGGCAAGAAGAACCCT
CCACAAGTTTCCCTCATTCGACTGCAGACACTCTACCATGCAGACAAACAGAAAATGGAT
TACCATGTCCTCGAACTAGTGACATGGCTTCACCGTTTGATTAGCCTGGTAAGATTTAAC
GGGCCCAAGGCTTTCCCAGGACGATCACCAACACGCAAAGGACTTAATCTGCAGACTGAG
TTGATGATGAATACTACCTCAAAAACGCCTAAGGTTCAGATTTCTCTTGAAGATAGGAAC
TTACTCGAGAAAGTGATGAAACGGAAATGTTTGGTCCCTGGAAGAAGCAAGAGCCAGGAG
TTTCTGTTGCCTAAGAATCGGAAAAAGGTGTGGGCGCTAAGTAGAAGCATGGGTAACTCC
CCTCGTACCGACTTTCAACATCCAAAGGCTACTGTTTTGGATATATTAGATGGCTTACAT
TAG

Peptide Sequence

PEP ID

PGSC0003DMP400017393
PEP Infomation

pacid=37473197 transcript=PGSC0003DMT400025540 locus=PGSC0003DMG400009867 ID=PGSC0003DMT400025540.v4.03 annot-version=v4.03
Sequence

MGGVCTGGTARSRVEIHHESPSGSSKKMESVESIGKQKKDESFSYPDVGAFRGTPNLYDS
GELYMSISRELKPSTPARTGVNKVPSSFLGKASIVGLEKAVEVLDTLGSSMTNLNSGGFM
TGMTSRGNKIAILAFEVANTITKGANLLQSLSKENVEYLKKEILPSKGVQQLVSTNMKEL
LTIAAADKREEFDIFSREVIRFGDMCKDPQWHNLNRYFSRLDSDTLTHKQLRSEAELMMQ
ELSTLAQHTSELYHELHALDRFEQDYRRKLEELDSLNLPRKGEGLMMLQSELKHQRKIAR
SLKKKSLWAKGLEEVVEKLVDIVTYIHQAIVEAFGDNGLTSAVKEPVKKQERLGVAGLAL
HYANLVTQIDNIASRPTSLPPNMRDGLYNGLPPSIKTALRSRLQAVDAKEELTIPQIKAE
MEKTLQWLVPVAADTTKAHQGFGWVGEWANTGSEFGKKNPPQVSLIRLQTLYHADKQKMD
YHVLELVTWLHRLISLVRFNGPKAFPGRSPTRKGLNLQTELMMNTTSKTPKVQISLEDRN
LLEKVMKRKCLVPGRSKSQEFLLPKNRKKVWALSRSMGNSPRTDFQHPKATVLDILDGLH
*

Transcript Sequence

Transcript ID

PGSC0003DMT400025540
Transcript Infomation

pacid=37473197 locus=PGSC0003DMG400009867 ID=PGSC0003DMT400025540.v4.03 annot-version=v4.03
Sequence

ATGGGAGGTGTTTGTACAGGTGGAACAGCGAGGAGTAGAGTTGAAATTCACCATGAGAGC
CCCTCAGGGTCTTCAAAAAAGATGGAGTCAGTTGAGAGCATTGGAAAGCAGAAGAAAGAT
GAATCTTTTTCGTATCCTGATGTGGGTGCTTTTCGTGGGACGCCTAATCTATATGATTCT
GGTGAATTGTATATGTCTATTTCGAGGGAGTTGAAGCCATCGACACCTGCTAGGACAGGA
GTGAACAAGGTTCCTAGCTCTTTTCTTGGGAAGGCCAGTATAGTCGGCCTAGAGAAAGCA
GTTGAAGTATTAGATACACTTGGGAGCAGCATGACAAATTTGAACTCCGGAGGCTTTATG
ACTGGAATGACATCAAGAGGGAATAAAATAGCTATCCTAGCATTTGAGGTAGCGAATACT
ATTACCAAAGGTGCAAATTTGTTGCAATCTCTTTCCAAAGAAAATGTCGAGTATTTAAAG
AAGGAAATTCTACCTTCAAAAGGAGTGCAACAATTGGTTTCTACTAATATGAAGGAGCTG
CTTACTATTGCTGCTGCCGACAAAAGGGAGGAATTTGACATCTTCTCTCGCGAAGTGATT
AGGTTTGGAGATATGTGTAAAGACCCTCAATGGCACAACCTAAATCGATATTTTTCCAGG
TTGGACTCAGACACTCTTACCCACAAACAGCTAAGATCAGAGGCTGAATTGATGATGCAG
GAACTGAGCACTCTGGCTCAGCATACTTCTGAATTATATCACGAACTGCACGCACTGGAC
AGATTCGAACAGGATTATCGGAGGAAACTTGAGGAATTAGATTCCTTAAATCTACCTCGA
AAAGGTGAAGGTCTCATGATGTTACAGAGTGAACTAAAACATCAAAGAAAGATTGCGAGG
AGCTTGAAAAAGAAATCTCTTTGGGCTAAGGGTTTGGAGGAGGTTGTGGAGAAGCTTGTT
GACATTGTTACTTATATACATCAAGCAATTGTGGAAGCATTTGGGGACAATGGATTGACA
TCTGCTGTCAAGGAGCCAGTGAAGAAACAAGAAAGACTGGGAGTAGCTGGTCTGGCTTTA
CACTATGCTAACTTAGTTACTCAAATTGATAACATTGCTTCACGGCCCACCTCTCTTCCG
CCTAACATGAGGGATGGATTATATAATGGATTACCTCCTTCCATAAAAACGGCCCTTCGT
TCACGTCTGCAGGCGGTTGATGCAAAGGAAGAGCTCACAATTCCTCAGATTAAAGCAGAG
ATGGAAAAAACTCTTCAGTGGCTTGTCCCAGTAGCTGCAGATACTACGAAAGCACACCAA
GGCTTTGGATGGGTTGGAGAGTGGGCCAACACCGGAAGCGAGTTTGGCAAGAAGAACCCT
CCACAAGTTTCCCTCATTCGACTGCAGACACTCTACCATGCAGACAAACAGAAAATGGAT
TACCATGTCCTCGAACTAGTGACATGGCTTCACCGTTTGATTAGCCTGGTAAGATTTAAC
GGGCCCAAGGCTTTCCCAGGACGATCACCAACACGCAAAGGACTTAATCTGCAGACTGAG
TTGATGATGAATACTACCTCAAAAACGCCTAAGGTTCAGATTTCTCTTGAAGATAGGAAC
TTACTCGAGAAAGTGATGAAACGGAAATGTTTGGTCCCTGGAAGAAGCAAGAGCCAGGAG
TTTCTGTTGCCTAAGAATCGGAAAAAGGTGTGGGCGCTAAGTAGAAGCATGGGTAACTCC
CCTCGTACCGACTTTCAACATCCAAAGGCTACTGTTTTGGATATATTAGATGGCTTACAT
TAG