Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400025536
CDS Infomation

pacid=37474487 polypeptide=PGSC0003DMP400017390 locus=PGSC0003DMG400009864 ID=PGSC0003DMT400025536.v4.03 annot-version=v4.03
Sequence

ATGGCGAAGTCCAAAAAACCAAAAAATTCTTCGGATAGAGAAAAATGGAACAAAGTGTTC
AACGCTTTAGTTCACATGTTGAAATCACAGCAGACGCAGCTTGAATCCCTTGCAAAAGAG
AGAATGATACTTGAAGATCGGATAAAATTACAGAATGATCGATGGGTATCTGATATTGAT
AGATTTCAAGAACAAATTTATGAGATGAGGAAAGAATTTACAATTCAAGAGATGGAGCGC
ATGCTTGAGGTTGCGAAATCTGAGTTCGTTGTTGGTTTGAAGCAACGAGATGTTGCCGTG
TTCCAAAGAAAGTTCGAAAATGCAGATAGTGAACTGGCTGACTTCAGAGAATGGTTTGAC
TACCTCTCTCAGAAATGCTCTGAACCAAATGATGTACCAAGGGCTGCAACAAATGAAAAG
TCAGAGACAAGAAAAAAGGCATGGGAAGATGAGGTGAGAAGGCTTAAAACAGAAAATGAG
AAGCTTACTTCAGAGAAAAATTCTGAGATATCTGCCCTCTTGGCAGAAAAGGATTTTATT
TGGAACCAGTTCAACAAACTGGAGCACGACATGACTGAGCAATTGAGGAGAAAATGTGCT
GAGCTAGAGCATGCAAATGGTAAAATACAGGCATTTTCGAGGAACATTGAGGAATTACAA
TCGTCCAACGCTAATAAGGATAATACAATTGCAACATTAAGAAGTCAATTGGATAATACA
ACTGCAACATTGAGAAGTCAAATGGCCAATTTGGAATCTGACTCCGTCACTAAGAGTGGA
GAGATATCCAAACTTTCCACTGAACTAGCGTTGCTAAAGAAGTGCGGAAGTGCCTCTGTC
ACTCCCGTGCTGCGTCGCTCCACAACTGGACCAGGACCTTCGAAGTTGGGAGGCACGTCC
CGTGGAACAGATCAGAAGTATCTAACTGTCAAAGTAGAAAAACAATCTTCACAAGCCCTT
GAAAAGGGACAGAGAAGTTCCAAACGAAAAGCTGGTAATAGTATCTTGGGTGCTCCAAGT
CTCTTCACATCCGCATTTAAGCTACCTAAATTAAAAATGTCATCTCCCTGTGTGACATGA

Peptide Sequence

PEP ID

PGSC0003DMP400017390
PEP Infomation

pacid=37474487 transcript=PGSC0003DMT400025536 locus=PGSC0003DMG400009864 ID=PGSC0003DMT400025536.v4.03 annot-version=v4.03
Sequence

MAKSKKPKNSSDREKWNKVFNALVHMLKSQQTQLESLAKERMILEDRIKLQNDRWVSDID
RFQEQIYEMRKEFTIQEMERMLEVAKSEFVVGLKQRDVAVFQRKFENADSELADFREWFD
YLSQKCSEPNDVPRAATNEKSETRKKAWEDEVRRLKTENEKLTSEKNSEISALLAEKDFI
WNQFNKLEHDMTEQLRRKCAELEHANGKIQAFSRNIEELQSSNANKDNTIATLRSQLDNT
TATLRSQMANLESDSVTKSGEISKLSTELALLKKCGSASVTPVLRRSTTGPGPSKLGGTS
RGTDQKYLTVKVEKQSSQALEKGQRSSKRKAGNSILGAPSLFTSAFKLPKLKMSSPCVT*

Transcript Sequence

Transcript ID

PGSC0003DMT400025536
Transcript Infomation

pacid=37474487 locus=PGSC0003DMG400009864 ID=PGSC0003DMT400025536.v4.03 annot-version=v4.03
Sequence

ATGGCGAAGTCCAAAAAACCAAAAAATTCTTCGGATAGAGAAAAATGGAACAAAGTGTTC
AACGCTTTAGTTCACATGTTGAAATCACAGCAGACGCAGCTTGAATCCCTTGCAAAAGAG
AGAATGATACTTGAAGATCGGATAAAATTACAGAATGATCGATGGGTATCTGATATTGAT
AGATTTCAAGAACAAATTTATGAGATGAGGAAAGAATTTACAATTCAAGAGATGGAGCGC
ATGCTTGAGGTTGCGAAATCTGAGTTCGTTGTTGGTTTGAAGCAACGAGATGTTGCCGTG
TTCCAAAGAAAGTTCGAAAATGCAGATAGTGAACTGGCTGACTTCAGAGAATGGTTTGAC
TACCTCTCTCAGAAATGCTCTGAACCAAATGATGTACCAAGGGCTGCAACAAATGAAAAG
TCAGAGACAAGAAAAAAGGCATGGGAAGATGAGGTGAGAAGGCTTAAAACAGAAAATGAG
AAGCTTACTTCAGAGAAAAATTCTGAGATATCTGCCCTCTTGGCAGAAAAGGATTTTATT
TGGAACCAGTTCAACAAACTGGAGCACGACATGACTGAGCAATTGAGGAGAAAATGTGCT
GAGCTAGAGCATGCAAATGGTAAAATACAGGCATTTTCGAGGAACATTGAGGAATTACAA
TCGTCCAACGCTAATAAGGATAATACAATTGCAACATTAAGAAGTCAATTGGATAATACA
ACTGCAACATTGAGAAGTCAAATGGCCAATTTGGAATCTGACTCCGTCACTAAGAGTGGA
GAGATATCCAAACTTTCCACTGAACTAGCGTTGCTAAAGAAGTGCGGAAGTGCCTCTGTC
ACTCCCGTGCTGCGTCGCTCCACAACTGGACCAGGACCTTCGAAGTTGGGAGGCACGTCC
CGTGGAACAGATCAGAAGTATCTAACTGTCAAAGTAGAAAAACAATCTTCACAAGCCCTT
GAAAAGGGACAGAGAAGTTCCAAACGAAAAGCTGGTAATAGTATCTTGGGTGCTCCAAGT
CTCTTCACATCCGCATTTAAGCTACCTAAATTAAAAATGTCATCTCCCTGTGTGACATGA