Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400025493
CDS Infomation

pacid=37430458 polypeptide=PGSC0003DMP400017360 locus=PGSC0003DMG400009843 ID=PGSC0003DMT400025493.v4.03 annot-version=v4.03
Sequence

ATGTCTCCATTGATGCTTCTGCTCTGTTTTCTTCTTCAACTAATCTACAGTTTCTACTTT
TGTTCTTCTTCTTCTGCTGCTGCTGCTACCTCTACCCCTTCTGCTCCATTCAACTCTTTG
CTTCCTTCCGACGCTGTTTCGTTATTGTCATTCAAGTCAAAAGCTGACCTTGACAACAAG
CTTCATTACACACTTAACGAGCGTTTTGATTACTGTCAATGGCAAGGAGTGAAATGTGTA
CAGGGTCGTGTTGTGCGTTTAGTTCTTCAAGGGTTTAGTCTCCGGGGTACTTTTCCGGCG
AATAGTTTAACTCATCTTGACCAACTCCGAATACTCAATCTTAGGAATAACTCACTTTCC
GGTCCTATTCCTGATCTTTCGGGTCTTCCTAACCTGAAAACTCTGTTTCTTGATCATAAT
TTTTTCTCCGGAACTTTCCCCTTTTCTGTTCTTTCTATTCACCGTCTTGTTATTCTTGAT
CTTTCTCGTAACAATCTCACTGGTTCACTCCCTGTTAGGCTTACTGTTCTTGACCGGTTG
AACTATCTCCGGCTTGATTCCAACTGGTTTAACGGTTCGATTCCGCCGTTGAACCAGACC
CAACTCCAAATTTTCAATGTGTCTAATAATAACCTCACTGGTCCAGTACCTGTTACTCCA
ACTCTGAAGAAATTTAACATACGCTCGTTCTTACGGAACCCTAGTCTTTGTGGTGAGGTT
GTTGATAAGCCGTGCCGTTCGGCACCGTTCTTTGATTCGCCTTCCTCTGCTGCCTCTCCG
CCCACACCGTTATACCAAAACGCACAGTCGCAGGGTATTCTTATTAGTCCTCCACCTCAG
CACAAACACAAAAAAGTTGGTGTCGTTTTGGGTTTTGTAGTTGGAACATTGATTTTGATT
GCAGCTGTTCTCTGTCTTTTTGCTTTTGTGAAAAAGAGAAGAGAAGAAACTGAAACTGAA
TCAAAAGCAACAAAATGTACCATTGAGACCATCACTAATAGTGCGGCGAACGCAACGGTT
TCTGAGCCAGATGATAGTAGCCAAGAGATTAAATTAGAAAAAGAAATGAAAGTGCTTCAA
GCCCCCAAACAACAGATGAAGAGTGGAAATCTGATATTTTGTTCAGGGGAAACAGAGTTG
TATTCTTTAGAACAACTAATGAGAGCATCAGCAGAGTTGCTTGGAAGAGGCACAATTGGA
ACAACGTATAAAGCTCTGATGGCTAGTCAGTTAATCGTTTCAGTAAAGCGATTGGATGCT
GGTAAAACTTCGATTACGAGTGCAGAAGCGTTTGAGCAACACATGGAGTCAGTTGGGATG
TTGAGGCACCCAAATTTGGTTGCAGTCAGAGCATACTTTCAGGCTAAACAAGAAAGGCTT
GTTATCTATGATTATCAGCCTAATGGCAGTCTCTTCAATCTAATTCATGGTTCAAGATCA
ACAAGGGCAAGGCCTCTTCACTGGACATCGTGTCTAAAAATAGCAGAAGATGTGGCTCAG
GGCCTTGCTTACATCCATCAAGCGTCAAAGCTCACTCATGGCAACTTGAAATCCTCCAAC
GTCCTTCTAGGGTCTGATTTTGAGGCCTGTCTAACAGACTACTCCATCATCGCGCTTGCA
GATATTTCTTTGGAGGATGATCCTGATTCAGCATGCTATAAAGCACCAGAAGTGCGCAAA
TCAGCACGAAGAGCCACGCCTGGGTCTGACGTATATGCCTATGGCATTCTGTTATTAGAG
CTTTTAACGGGCAAACCTCCATCTCAGCATCCACATCTCTCTCCCCCTGATGTACCGGAT
TGGGTTAGAGCTATGAGGGAGGATGATAATGAGGAGGATAGATGGCTTGCAATGCTAATT
GACCTTGCTAGTATATGTAGCTTGACATCACCAGAACAGAGACCAACAATGAGGCAAATC
TTGAAAATGATACAAGATATAAAGGATAGCGCAATGGTGGAGAATAACAAAAGAGATGCA
CATAATGGATACTCATAG

Peptide Sequence

PEP ID

PGSC0003DMP400017360
PEP Infomation

pacid=37430458 transcript=PGSC0003DMT400025493 locus=PGSC0003DMG400009843 ID=PGSC0003DMT400025493.v4.03 annot-version=v4.03
Sequence

MSPLMLLLCFLLQLIYSFYFCSSSSAAAATSTPSAPFNSLLPSDAVSLLSFKSKADLDNK
LHYTLNERFDYCQWQGVKCVQGRVVRLVLQGFSLRGTFPANSLTHLDQLRILNLRNNSLS
GPIPDLSGLPNLKTLFLDHNFFSGTFPFSVLSIHRLVILDLSRNNLTGSLPVRLTVLDRL
NYLRLDSNWFNGSIPPLNQTQLQIFNVSNNNLTGPVPVTPTLKKFNIRSFLRNPSLCGEV
VDKPCRSAPFFDSPSSAASPPTPLYQNAQSQGILISPPPQHKHKKVGVVLGFVVGTLILI
AAVLCLFAFVKKRREETETESKATKCTIETITNSAANATVSEPDDSSQEIKLEKEMKVLQ
APKQQMKSGNLIFCSGETELYSLEQLMRASAELLGRGTIGTTYKALMASQLIVSVKRLDA
GKTSITSAEAFEQHMESVGMLRHPNLVAVRAYFQAKQERLVIYDYQPNGSLFNLIHGSRS
TRARPLHWTSCLKIAEDVAQGLAYIHQASKLTHGNLKSSNVLLGSDFEACLTDYSIIALA
DISLEDDPDSACYKAPEVRKSARRATPGSDVYAYGILLLELLTGKPPSQHPHLSPPDVPD
WVRAMREDDNEEDRWLAMLIDLASICSLTSPEQRPTMRQILKMIQDIKDSAMVENNKRDA
HNGYS*

Transcript Sequence

Transcript ID

PGSC0003DMT400025493
Transcript Infomation

pacid=37430458 locus=PGSC0003DMG400009843 ID=PGSC0003DMT400025493.v4.03 annot-version=v4.03
Sequence

ATGTCTCCATTGATGCTTCTGCTCTGTTTTCTTCTTCAACTAATCTACAGTTTCTACTTT
TGTTCTTCTTCTTCTGCTGCTGCTGCTACCTCTACCCCTTCTGCTCCATTCAACTCTTTG
CTTCCTTCCGACGCTGTTTCGTTATTGTCATTCAAGTCAAAAGCTGACCTTGACAACAAG
CTTCATTACACACTTAACGAGCGTTTTGATTACTGTCAATGGCAAGGAGTGAAATGTGTA
CAGGGTCGTGTTGTGCGTTTAGTTCTTCAAGGGTTTAGTCTCCGGGGTACTTTTCCGGCG
AATAGTTTAACTCATCTTGACCAACTCCGAATACTCAATCTTAGGAATAACTCACTTTCC
GGTCCTATTCCTGATCTTTCGGGTCTTCCTAACCTGAAAACTCTGTTTCTTGATCATAAT
TTTTTCTCCGGAACTTTCCCCTTTTCTGTTCTTTCTATTCACCGTCTTGTTATTCTTGAT
CTTTCTCGTAACAATCTCACTGGTTCACTCCCTGTTAGGCTTACTGTTCTTGACCGGTTG
AACTATCTCCGGCTTGATTCCAACTGGTTTAACGGTTCGATTCCGCCGTTGAACCAGACC
CAACTCCAAATTTTCAATGTGTCTAATAATAACCTCACTGGTCCAGTACCTGTTACTCCA
ACTCTGAAGAAATTTAACATACGCTCGTTCTTACGGAACCCTAGTCTTTGTGGTGAGGTT
GTTGATAAGCCGTGCCGTTCGGCACCGTTCTTTGATTCGCCTTCCTCTGCTGCCTCTCCG
CCCACACCGTTATACCAAAACGCACAGTCGCAGGGTATTCTTATTAGTCCTCCACCTCAG
CACAAACACAAAAAAGTTGGTGTCGTTTTGGGTTTTGTAGTTGGAACATTGATTTTGATT
GCAGCTGTTCTCTGTCTTTTTGCTTTTGTGAAAAAGAGAAGAGAAGAAACTGAAACTGAA
TCAAAAGCAACAAAATGTACCATTGAGACCATCACTAATAGTGCGGCGAACGCAACGGTT
TCTGAGCCAGATGATAGTAGCCAAGAGATTAAATTAGAAAAAGAAATGAAAGTGCTTCAA
GCCCCCAAACAACAGATGAAGAGTGGAAATCTGATATTTTGTTCAGGGGAAACAGAGTTG
TATTCTTTAGAACAACTAATGAGAGCATCAGCAGAGTTGCTTGGAAGAGGCACAATTGGA
ACAACGTATAAAGCTCTGATGGCTAGTCAGTTAATCGTTTCAGTAAAGCGATTGGATGCT
GGTAAAACTTCGATTACGAGTGCAGAAGCGTTTGAGCAACACATGGAGTCAGTTGGGATG
TTGAGGCACCCAAATTTGGTTGCAGTCAGAGCATACTTTCAGGCTAAACAAGAAAGGCTT
GTTATCTATGATTATCAGCCTAATGGCAGTCTCTTCAATCTAATTCATGGTTCAAGATCA
ACAAGGGCAAGGCCTCTTCACTGGACATCGTGTCTAAAAATAGCAGAAGATGTGGCTCAG
GGCCTTGCTTACATCCATCAAGCGTCAAAGCTCACTCATGGCAACTTGAAATCCTCCAAC
GTCCTTCTAGGGTCTGATTTTGAGGCCTGTCTAACAGACTACTCCATCATCGCGCTTGCA
GATATTTCTTTGGAGGATGATCCTGATTCAGCATGCTATAAAGCACCAGAAGTGCGCAAA
TCAGCACGAAGAGCCACGCCTGGGTCTGACGTATATGCCTATGGCATTCTGTTATTAGAG
CTTTTAACGGGCAAACCTCCATCTCAGCATCCACATCTCTCTCCCCCTGATGTACCGGAT
TGGGTTAGAGCTATGAGGGAGGATGATAATGAGGAGGATAGATGGCTTGCAATGCTAATT
GACCTTGCTAGTATATGTAGCTTGACATCACCAGAACAGAGACCAACAATGAGGCAAATC
TTGAAAATGATACAAGATATAAAGGATAGCGCAATGGTGGAGAATAACAAAAGAGATGCA
CATAATGGATACTCATAG