Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400025312
CDS Infomation

pacid=37431640 polypeptide=PGSC0003DMP400017257 locus=PGSC0003DMG400009773 ID=PGSC0003DMT400025312.v4.03 annot-version=v4.03
Sequence

ATGAAAACACCGGCGAATACTGCCGGAGTTCAGCAACAGCAGCAGCATACTGTTAACGGG
AATCATCCTGCTGAAGTGGAGAAGAAAAGCATAAATCCAGAGCTATGGCAGGCCTGCGCC
GGTCCTCTAGTGAACTTACCGGCGGCTGGGACCCATGTTGTTTATTTTCCACAAGGCCAC
AGTGAACAGGTTGCGGCATCTATGAAGAAAGACGTAGATGCCCAAATACCAAACTATCCA
AACCTTCCATCAAAGTTAGTTTGTCTCCTTCACAATATTACCCTGCATGCGGATCCAGAA
ACAGATGAAGTTTATGCACAAATGACACTGCAGCCAGTTCCTTCATTTGACAAGGAGGCA
TTGTTGAGATCAGATTTGTCTATGAAATTAAATAAACCACAAACAGAATTTTTTTGCAAG
ACCTTGACTGCCAGTGATACAAGCACACATGGGGGTTTTTCTGTTCCTCGACGTTCTGCA
GAAAAAATATTCCCGCCTCTGGATTACTCAATGCAACCACCTGCTCAAGAACTTGTGGCT
AGAGACTTGCATGATAATTTGTGGACCTTCCGCCATATTTATCGCGGGCAACCCAAACGC
CATTTGCTAACGACAGGGTGGAGCCTCTTTGTCAGTGGGAAGAGGCTCTTTGCTGGTGAC
TCAGTTTTGTTTATTAGGGATGAAAAGCAGCAGCTTCTACTTGGAATTAGGCGGGCAAAC
AGACAGCCAACCAACTTATCATCATCGGTGTTGTCAAGTGACAGCATGCATATTGGTATC
CTAGCAGCGGCTGCCCATGCAGCTGCAAACAACAGCCCGTTCACTGTGTTTTATAACCCA
AGGGCAAGTCCTTCAGAATTTGTCATCCCTTTAGCCAAGTATTACAAGGCAACTTATAGC
TGTCAAGTATCACTTGGCATGCGATTCCGCATGATGTTTGAGACAGAAGAATCAGGAACT
AGAAGGTATATGGGCACAATTACTGGCATCAGTGATCTTGATCCAGTGAGGTGGAAGAAC
TCACAGTGGCGCAACTTGCAGGTTGGTTGGGATGAGTCAACTGCTGGGGAGAGGCGTAAC
CGAGTCTCAATTTGGGAGATTGAACCAGTAACAGCACCGTTTTTCATCTGTCCTACTCCA
CCATTCTTTAGATCAAAGCGGCCAAGGCTACCTGGAATGCCAGATGATGATTGTTCTGAT
CTGGATGGCCTGTTTAAGAGGACAATGCCATGGCTCGGTGATGACTTTGGCATGAAGGAT
CCGCAAGGTCTTCCAGGCCTGAGCTTAGTCCAATGGATGAACATGCAACAGAATCCTTCT
CTGGCTAACTCAATGCAACCAAACTACCTGCATTCTTTGTCTGGTTCTGTGCTACAGAAT
GTAGGAGGTGGAGCAGACCTCTCACGTCAGTTAGGTCTACCAGCACCTCAGCTTCCTCAG
CAGAACACTTTGCAGTTTGGTGCCCAAAGGCCAACCCAACAAGTTCAGCAGCTCGACCAG
CTTCAGAAGTTACCAACTACCACATTGAGTCCAGCAGGCTCCATTATGCAGTCGCAGCAA
CAGTTGTCGGATATCAGTCAGCAACCAAGACAGAACTTAATTAACCAATCAGTGCCTACA
AACCATGTTCAGGCCCAGCTTTTGCAAGCGCAAAGTCTTGTGCAATCTCAGAATGTCCTA
CAGCAACAACAATCATTTCAAAATCAGCTGCAGAGAAATCTTCCTCAGAACCTGCCGCAG
CAGCAACAGATTATGAATCAGACTCAGCAGCAAAGTTTCATGCCACCCCAGCCGAATGAT
CCGCTTAACCAACAGCTGCATTTCTCTGATAACCAATTACAGATGCAGCTTTTGCAGAAG
CTGCAGCAGCAGTCACTTCTAGCTCAACAATCTTTACTGCAACAACCATCCCAGCTTATG
CCAATCCAAGATCAGCAGAAGCACATAGATGTATCACAGAACTTTTCTAGGTCACTTGCA
ACAAGCCAAATGCTAGATATGTCTCAAACCACGTCCACCTCCACGACTCTTTCCCAGCCA
CAAGTTGCCCAGCAGCAAATGACGATAAATAATAGCCAGTCTAATCTTCGTTTTGCCCAG
CCAAATCAGCATATGAAGCAACAGCAGCAGCAGCAACCAGGAATTCTACCAGAAATACCT
GGACAAGTTGGCCAGATTCTACCACCGACAACTAATCAGCTTTCCGCAAACTGCAGTAGC
TTCTTAACAGGAGCTGTAGGTGGAGGCCAGTCGGTGGTTACGGATGATATCCCATCATGT
TCCACCTCACCATCCACCAACAACTGTCAAAATGTAGTTCAGCCAATTATGAATGGTAGG
ATCCATCGAGGCACAGCTGCAGCGGATGAAACAACCCAGTCTTCTCTACCCCTTTTGAGT
TCCAGTGGATTAGAAGCTATGTCCCCTAATAGAAATCTAGTTAAAGATTTGCAGCAAAAA
CCTGATGTGAAGCCCTCATTGAATATCTCCAAGAGCCAGAACCATGGGTTTTCAACTCCT
CAAACATACCTTAATACTGCAGTTCCCCAGATGGATTATTTAGATAGTTCATCTTCAGCA
ACCTCTGTCTACTTTTCTCAAAATGATGTCCAATTGCAGCAGACGACTAACCCGATGTCT
TTCAGTTCTCAAGCAGTCGTATTTAGAGATAGTCAAGATGGAGAAGTTCAGGGTGACCCC
AGAAATAGTGTTGCTTTTGGAGCAAACATGGACAATCAGTTAGGAATATCCATGATGCCT
GATTCTTTGATCACAAATAGCTTGGTGGGGTCAAGGAAAGATGTATCAAATAATATCTCA
TCAGGTGGAGGCATGCTTTCCAGCTATGAGAATCCCAAGGATGCACAGCCTGAACTATCA
TCCTCAATAGTCTCCCAATCATTTGGAGTTCCTGATATGGCCTTCAATTCAATTGATTCT
ACCATAAATGAAGGCAGCTTCATGAATAGAGGTGCCTGGGCCCCACCACCTCAAATGCCT
CGAATGCGGACGTTTACCAAGGTACACAAGCGTGGTGCTGTTGGAAGATCAATCGACATC
ACACGTTATTCAGGCTATGAAGAGCTTAAACAAGATTTAGCTCGTAGATTTGGTATAGAG
GGACAACTGGAGGATAGACAAAGAATAGGATGGAAGCTTGTATATGTGGATCATGAGAAT
GACGATCTGCTTGTTGGCGATGATCCTTGGGAGGAATTCGTGAACTGTGTCCGCTGCATC
AAGATTCTTTCTCCACAAGAGGTCCAACAAATGAGCTTGGATGGAGATTTTGGGTATAAT
GTCCAAAATCAAGCTTTTAGTAGTTCAGACGGAGGAAATATGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400017257
PEP Infomation

pacid=37431640 transcript=PGSC0003DMT400025312 locus=PGSC0003DMG400009773 ID=PGSC0003DMT400025312.v4.03 annot-version=v4.03
Sequence

MKTPANTAGVQQQQQHTVNGNHPAEVEKKSINPELWQACAGPLVNLPAAGTHVVYFPQGH
SEQVAASMKKDVDAQIPNYPNLPSKLVCLLHNITLHADPETDEVYAQMTLQPVPSFDKEA
LLRSDLSMKLNKPQTEFFCKTLTASDTSTHGGFSVPRRSAEKIFPPLDYSMQPPAQELVA
RDLHDNLWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRAN
RQPTNLSSSVLSSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVIPLAKYYKATYS
CQVSLGMRFRMMFETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGERRN
RVSIWEIEPVTAPFFICPTPPFFRSKRPRLPGMPDDDCSDLDGLFKRTMPWLGDDFGMKD
PQGLPGLSLVQWMNMQQNPSLANSMQPNYLHSLSGSVLQNVGGGADLSRQLGLPAPQLPQ
QNTLQFGAQRPTQQVQQLDQLQKLPTTTLSPAGSIMQSQQQLSDISQQPRQNLINQSVPT
NHVQAQLLQAQSLVQSQNVLQQQQSFQNQLQRNLPQNLPQQQQIMNQTQQQSFMPPQPND
PLNQQLHFSDNQLQMQLLQKLQQQSLLAQQSLLQQPSQLMPIQDQQKHIDVSQNFSRSLA
TSQMLDMSQTTSTSTTLSQPQVAQQQMTINNSQSNLRFAQPNQHMKQQQQQQPGILPEIP
GQVGQILPPTTNQLSANCSSFLTGAVGGGQSVVTDDIPSCSTSPSTNNCQNVVQPIMNGR
IHRGTAAADETTQSSLPLLSSSGLEAMSPNRNLVKDLQQKPDVKPSLNISKSQNHGFSTP
QTYLNTAVPQMDYLDSSSSATSVYFSQNDVQLQQTTNPMSFSSQAVVFRDSQDGEVQGDP
RNSVAFGANMDNQLGISMMPDSLITNSLVGSRKDVSNNISSGGGMLSSYENPKDAQPELS
SSIVSQSFGVPDMAFNSIDSTINEGSFMNRGAWAPPPQMPRMRTFTKVHKRGAVGRSIDI
TRYSGYEELKQDLARRFGIEGQLEDRQRIGWKLVYVDHENDDLLVGDDPWEEFVNCVRCI
KILSPQEVQQMSLDGDFGYNVQNQAFSSSDGGNM*

Transcript Sequence

Transcript ID

PGSC0003DMT400025312
Transcript Infomation

pacid=37431640 locus=PGSC0003DMG400009773 ID=PGSC0003DMT400025312.v4.03 annot-version=v4.03
Sequence

ATGAAAACACCGGCGAATACTGCCGGAGTTCAGCAACAGCAGCAGCATACTGTTAACGGG
AATCATCCTGCTGAAGTGGAGAAGAAAAGCATAAATCCAGAGCTATGGCAGGCCTGCGCC
GGTCCTCTAGTGAACTTACCGGCGGCTGGGACCCATGTTGTTTATTTTCCACAAGGCCAC
AGTGAACAGGTTGCGGCATCTATGAAGAAAGACGTAGATGCCCAAATACCAAACTATCCA
AACCTTCCATCAAAGTTAGTTTGTCTCCTTCACAATATTACCCTGCATGCGGATCCAGAA
ACAGATGAAGTTTATGCACAAATGACACTGCAGCCAGTTCCTTCATTTGACAAGGAGGCA
TTGTTGAGATCAGATTTGTCTATGAAATTAAATAAACCACAAACAGAATTTTTTTGCAAG
ACCTTGACTGCCAGTGATACAAGCACACATGGGGGTTTTTCTGTTCCTCGACGTTCTGCA
GAAAAAATATTCCCGCCTCTGGATTACTCAATGCAACCACCTGCTCAAGAACTTGTGGCT
AGAGACTTGCATGATAATTTGTGGACCTTCCGCCATATTTATCGCGGGCAACCCAAACGC
CATTTGCTAACGACAGGGTGGAGCCTCTTTGTCAGTGGGAAGAGGCTCTTTGCTGGTGAC
TCAGTTTTGTTTATTAGGGATGAAAAGCAGCAGCTTCTACTTGGAATTAGGCGGGCAAAC
AGACAGCCAACCAACTTATCATCATCGGTGTTGTCAAGTGACAGCATGCATATTGGTATC
CTAGCAGCGGCTGCCCATGCAGCTGCAAACAACAGCCCGTTCACTGTGTTTTATAACCCA
AGGGCAAGTCCTTCAGAATTTGTCATCCCTTTAGCCAAGTATTACAAGGCAACTTATAGC
TGTCAAGTATCACTTGGCATGCGATTCCGCATGATGTTTGAGACAGAAGAATCAGGAACT
AGAAGGTATATGGGCACAATTACTGGCATCAGTGATCTTGATCCAGTGAGGTGGAAGAAC
TCACAGTGGCGCAACTTGCAGGTTGGTTGGGATGAGTCAACTGCTGGGGAGAGGCGTAAC
CGAGTCTCAATTTGGGAGATTGAACCAGTAACAGCACCGTTTTTCATCTGTCCTACTCCA
CCATTCTTTAGATCAAAGCGGCCAAGGCTACCTGGAATGCCAGATGATGATTGTTCTGAT
CTGGATGGCCTGTTTAAGAGGACAATGCCATGGCTCGGTGATGACTTTGGCATGAAGGAT
CCGCAAGGTCTTCCAGGCCTGAGCTTAGTCCAATGGATGAACATGCAACAGAATCCTTCT
CTGGCTAACTCAATGCAACCAAACTACCTGCATTCTTTGTCTGGTTCTGTGCTACAGAAT
GTAGGAGGTGGAGCAGACCTCTCACGTCAGTTAGGTCTACCAGCACCTCAGCTTCCTCAG
CAGAACACTTTGCAGTTTGGTGCCCAAAGGCCAACCCAACAAGTTCAGCAGCTCGACCAG
CTTCAGAAGTTACCAACTACCACATTGAGTCCAGCAGGCTCCATTATGCAGTCGCAGCAA
CAGTTGTCGGATATCAGTCAGCAACCAAGACAGAACTTAATTAACCAATCAGTGCCTACA
AACCATGTTCAGGCCCAGCTTTTGCAAGCGCAAAGTCTTGTGCAATCTCAGAATGTCCTA
CAGCAACAACAATCATTTCAAAATCAGCTGCAGAGAAATCTTCCTCAGAACCTGCCGCAG
CAGCAACAGATTATGAATCAGACTCAGCAGCAAAGTTTCATGCCACCCCAGCCGAATGAT
CCGCTTAACCAACAGCTGCATTTCTCTGATAACCAATTACAGATGCAGCTTTTGCAGAAG
CTGCAGCAGCAGTCACTTCTAGCTCAACAATCTTTACTGCAACAACCATCCCAGCTTATG
CCAATCCAAGATCAGCAGAAGCACATAGATGTATCACAGAACTTTTCTAGGTCACTTGCA
ACAAGCCAAATGCTAGATATGTCTCAAACCACGTCCACCTCCACGACTCTTTCCCAGCCA
CAAGTTGCCCAGCAGCAAATGACGATAAATAATAGCCAGTCTAATCTTCGTTTTGCCCAG
CCAAATCAGCATATGAAGCAACAGCAGCAGCAGCAACCAGGAATTCTACCAGAAATACCT
GGACAAGTTGGCCAGATTCTACCACCGACAACTAATCAGCTTTCCGCAAACTGCAGTAGC
TTCTTAACAGGAGCTGTAGGTGGAGGCCAGTCGGTGGTTACGGATGATATCCCATCATGT
TCCACCTCACCATCCACCAACAACTGTCAAAATGTAGTTCAGCCAATTATGAATGGTAGG
ATCCATCGAGGCACAGCTGCAGCGGATGAAACAACCCAGTCTTCTCTACCCCTTTTGAGT
TCCAGTGGATTAGAAGCTATGTCCCCTAATAGAAATCTAGTTAAAGATTTGCAGCAAAAA
CCTGATGTGAAGCCCTCATTGAATATCTCCAAGAGCCAGAACCATGGGTTTTCAACTCCT
CAAACATACCTTAATACTGCAGTTCCCCAGATGGATTATTTAGATAGTTCATCTTCAGCA
ACCTCTGTCTACTTTTCTCAAAATGATGTCCAATTGCAGCAGACGACTAACCCGATGTCT
TTCAGTTCTCAAGCAGTCGTATTTAGAGATAGTCAAGATGGAGAAGTTCAGGGTGACCCC
AGAAATAGTGTTGCTTTTGGAGCAAACATGGACAATCAGTTAGGAATATCCATGATGCCT
GATTCTTTGATCACAAATAGCTTGGTGGGGTCAAGGAAAGATGTATCAAATAATATCTCA
TCAGGTGGAGGCATGCTTTCCAGCTATGAGAATCCCAAGGATGCACAGCCTGAACTATCA
TCCTCAATAGTCTCCCAATCATTTGGAGTTCCTGATATGGCCTTCAATTCAATTGATTCT
ACCATAAATGAAGGCAGCTTCATGAATAGAGGTGCCTGGGCCCCACCACCTCAAATGCCT
CGAATGCGGACGTTTACCAAGGTACACAAGCGTGGTGCTGTTGGAAGATCAATCGACATC
ACACGTTATTCAGGCTATGAAGAGCTTAAACAAGATTTAGCTCGTAGATTTGGTATAGAG
GGACAACTGGAGGATAGACAAAGAATAGGATGGAAGCTTGTATATGTGGATCATGAGAAT
GACGATCTGCTTGTTGGCGATGATCCTTGGGAGGAATTCGTGAACTGTGTCCGCTGCATC
AAGATTCTTTCTCCACAAGAGGTCCAACAAATGAGCTTGGATGGAGATTTTGGGTATAAT
GTCCAAAATCAAGCTTTTAGTAGTTCAGACGGAGGAAATATGTAA