Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400025275
CDS Infomation

pacid=37472431 polypeptide=PGSC0003DMP400017235 locus=PGSC0003DMG400009762 ID=PGSC0003DMT400025275.v4.03 annot-version=v4.03
Sequence

ATGGAGACTCAACAATTACCCTTAATCTTCTTTATTTCACTCTTGTTATTTCTTTACTTC
ATATTCTATCTATTTCAAATATGGAAAAAATCAAAAACCTTAACCAAAAAATTGCCTCCT
GGCCCATGGAAGCTACCTATTATCGGGAACTTGCACCAATTAGCGAGTCATGGAGGCCTG
CCACATCACACTCTCCGAACCCTATCACAAAAATACGGGCCATTAACACACTTACAACTA
GGAGAAATTTCCGCGATTGTTGTATCTTCACCTGAAATGGCAAAAGAAATCATGAAAACT
CAAGATGTTCGTTTTGCAACTAGGCCTCAAAGTATGACTGGAAGTATTATTTTTTACAAT
TATTCGGACATAGCATTATGTCCATATGGTGATTACTGGAGAAATATGCGCAAAATATGT
GTCCTGGAACTTCTTAGTGCAAAAATGGTCAAATCATTTAACTCAATTCGACAAGAAGAG
ATGTCAAGTCTCGTCTCATCTATCATCAATTCTACGCCTGATGAGTCGTTGGTTAACCTA
TCGAATAAAATTTTTTGGTTTACAGGTTCTGTAACTTGTAGATCTGCTTTTGGGAAAGTT
GTTCATGATCAAGATAAGTTGATTATGTTGGTGAAAGAGGCTGTTTCGTTGTCTTCAGGA
TTTGACTTAACTGACTTGTTTCCATCACATAAATGGCTTCACGGGATCAGTGGGATGAAG
TCTAGGTTGTTGAAGGCTCACGAAAAGGTTGATGTGATTTTAGAGAAGCTCATTAATGAG
CATTGCGAAAATAGAGCAAATGGTAACAAAGGTAATGGTGAGTCCGGAGCTGAAGATTTG
ATTGATGTTTTACTACGAGTCATGGAGAGTGGGGAATTTGGAATGCCAATCACAAATCAA
AATATCAAAGCAGTTATTTTTGAAATGTTCATGGCAGGAGCTGAAACATCATCGACAACA
ATTATTTGGGCGTTTTCAGAAATGATAAAAAATCCAGGTGTTATGGCGAAAGCACAACTT
GAAGTTAGAGAAGCCTTTAAAGGAAAGAAGACATTTGAAGATATCGATTTAGAGGAGTTG
AAGTATTTGAAATTAGTGATAAAAGAAACACTAAGGTTACACCCCGCGGCTCCTCTATTA
ATCCCAAGGGAATGTAGAGAAGAAACACAAATTGATGGATACAATATACCTATCAAAACT
AAAGTTATAGTGAATGCGTGGGCAATTGGAAGAGATTCTAGATATTGGCATGACGATCCA
GAGAGCTTTATACCTGAGAGATTTGAGAATAGTTCTATTGATTTTAGAGGAAATAACTTT
GAGTTTATTCCGTTTGGTGCAGGAAGAAGAATGTGTCCGGGAATGTTATCCGGTTTAGCT
ACTGTAGGGCATTCTTTAGCTAAGTTGTTGTATCACTTCGATTGGAAACTTCCTGATGGA
GTTAGTGTTGATGATTTTGATATGACTGAAGCAGAAGGAGTAGCTGCCAGTAGAAAGAAT
GATCTTTGCTTGATTGCTACTCCTTTTGATCTCTCTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400017235
PEP Infomation

pacid=37472431 transcript=PGSC0003DMT400025275 locus=PGSC0003DMG400009762 ID=PGSC0003DMT400025275.v4.03 annot-version=v4.03
Sequence

METQQLPLIFFISLLLFLYFIFYLFQIWKKSKTLTKKLPPGPWKLPIIGNLHQLASHGGL
PHHTLRTLSQKYGPLTHLQLGEISAIVVSSPEMAKEIMKTQDVRFATRPQSMTGSIIFYN
YSDIALCPYGDYWRNMRKICVLELLSAKMVKSFNSIRQEEMSSLVSSIINSTPDESLVNL
SNKIFWFTGSVTCRSAFGKVVHDQDKLIMLVKEAVSLSSGFDLTDLFPSHKWLHGISGMK
SRLLKAHEKVDVILEKLINEHCENRANGNKGNGESGAEDLIDVLLRVMESGEFGMPITNQ
NIKAVIFEMFMAGAETSSTTIIWAFSEMIKNPGVMAKAQLEVREAFKGKKTFEDIDLEEL
KYLKLVIKETLRLHPAAPLLIPRECREETQIDGYNIPIKTKVIVNAWAIGRDSRYWHDDP
ESFIPERFENSSIDFRGNNFEFIPFGAGRRMCPGMLSGLATVGHSLAKLLYHFDWKLPDG
VSVDDFDMTEAEGVAASRKNDLCLIATPFDLS*

Transcript Sequence

Transcript ID

PGSC0003DMT400025275
Transcript Infomation

pacid=37472431 locus=PGSC0003DMG400009762 ID=PGSC0003DMT400025275.v4.03 annot-version=v4.03
Sequence

ATGGAGACTCAACAATTACCCTTAATCTTCTTTATTTCACTCTTGTTATTTCTTTACTTC
ATATTCTATCTATTTCAAATATGGAAAAAATCAAAAACCTTAACCAAAAAATTGCCTCCT
GGCCCATGGAAGCTACCTATTATCGGGAACTTGCACCAATTAGCGAGTCATGGAGGCCTG
CCACATCACACTCTCCGAACCCTATCACAAAAATACGGGCCATTAACACACTTACAACTA
GGAGAAATTTCCGCGATTGTTGTATCTTCACCTGAAATGGCAAAAGAAATCATGAAAACT
CAAGATGTTCGTTTTGCAACTAGGCCTCAAAGTATGACTGGAAGTATTATTTTTTACAAT
TATTCGGACATAGCATTATGTCCATATGGTGATTACTGGAGAAATATGCGCAAAATATGT
GTCCTGGAACTTCTTAGTGCAAAAATGGTCAAATCATTTAACTCAATTCGACAAGAAGAG
ATGTCAAGTCTCGTCTCATCTATCATCAATTCTACGCCTGATGAGTCGTTGGTTAACCTA
TCGAATAAAATTTTTTGGTTTACAGGTTCTGTAACTTGTAGATCTGCTTTTGGGAAAGTT
GTTCATGATCAAGATAAGTTGATTATGTTGGTGAAAGAGGCTGTTTCGTTGTCTTCAGGA
TTTGACTTAACTGACTTGTTTCCATCACATAAATGGCTTCACGGGATCAGTGGGATGAAG
TCTAGGTTGTTGAAGGCTCACGAAAAGGTTGATGTGATTTTAGAGAAGCTCATTAATGAG
CATTGCGAAAATAGAGCAAATGGTAACAAAGGTAATGGTGAGTCCGGAGCTGAAGATTTG
ATTGATGTTTTACTACGAGTCATGGAGAGTGGGGAATTTGGAATGCCAATCACAAATCAA
AATATCAAAGCAGTTATTTTTGAAATGTTCATGGCAGGAGCTGAAACATCATCGACAACA
ATTATTTGGGCGTTTTCAGAAATGATAAAAAATCCAGGTGTTATGGCGAAAGCACAACTT
GAAGTTAGAGAAGCCTTTAAAGGAAAGAAGACATTTGAAGATATCGATTTAGAGGAGTTG
AAGTATTTGAAATTAGTGATAAAAGAAACACTAAGGTTACACCCCGCGGCTCCTCTATTA
ATCCCAAGGGAATGTAGAGAAGAAACACAAATTGATGGATACAATATACCTATCAAAACT
AAAGTTATAGTGAATGCGTGGGCAATTGGAAGAGATTCTAGATATTGGCATGACGATCCA
GAGAGCTTTATACCTGAGAGATTTGAGAATAGTTCTATTGATTTTAGAGGAAATAACTTT
GAGTTTATTCCGTTTGGTGCAGGAAGAAGAATGTGTCCGGGAATGTTATCCGGTTTAGCT
ACTGTAGGGCATTCTTTAGCTAAGTTGTTGTATCACTTCGATTGGAAACTTCCTGATGGA
GTTAGTGTTGATGATTTTGATATGACTGAAGCAGAAGGAGTAGCTGCCAGTAGAAAGAAT
GATCTTTGCTTGATTGCTACTCCTTTTGATCTCTCTTAA