Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400025176
CDS Infomation

pacid=37435151 polypeptide=PGSC0003DMP400017173 locus=PGSC0003DMG400009729 ID=PGSC0003DMT400025176.v4.03 annot-version=v4.03
Sequence

ATGTCGAGCAAAATGATGCTAATGGCTAACTCCTTAACACACGTCCGTCCTCTCACTTGC
GCCACCGCCGCCGCCGCCGCCGCTGTTTACCCATCACGGCTAGTGGCACAACCACCGGAC
CTCATCAAATGGGTGAAAATTGAAGGTGGGTTTGTTCACAAATCCATTAAAATAGCACAA
GGTGATTCCTTTGGCCTTGGATTAGTTGCTTCTGAAGATATCCCAAAAGGGTCTGATCTT
ATTGCCTTACCTCAACATATTCCCCTCAAATTTGATGGGTCTTCTTCAGAATCAGAAAAT
TCCCATTCTGCTTTGATTAAATTAGCTCAGCATGTTCCTGAGGAGCTGTGGGCTATGAAA
TTGGGTTTGAAGCTTCTGCAAGAGAGAGCAAGGAAAGGTTCGTTCTGGTGGCCATACATC
AGCAATCTCCCAGAGACTTACTCAGTGCCGATTTTCTTTCCTGGAGAGGATATAAAGAAC
TTGCAGTATGCCCCTCTTCTTTATCAGGTGAACAAAAGATGCCGGTTTCTACTGGAATTT
GGGAAAATTCTGAAGCATGAACTCGAGAATCTTAAACCTGATGATCATCCTTTTAGTTGC
CAAGATGTGGATTCATCTGCTCTAGGATGGGCTATGTCAGCTGTTTCATCTCGAGCATTC
CGGTTGTATGGCGGTAAACGTCCTGATGGCACCCGCAGTAATGTTCCTATGATGCTTCCA
CTTATTGATATGTGCAACCACAGCTTTGATCCAAATGCTGAAATTGTACAGGAAGAAGCA
AACTCCGATAGAAATATGCTTGTAAAGGTGGTTGCAGGAAAGGAGATAAAGCAAAATGAT
CCATTGCTACTCAACTATGGCTGTTTAAGTAGTGATCTTTTTCTTTTGGACTATGGATTC
GTCATTCCATCAAACCCCTATGACTGCATCGAACTTAAATATGATGCTGCTCTTCTTGAT
GCTGCCAGTATGGCTGCAGGGGTTTCATCCCCAAGCTTCTCCTCGCCATCCCCATGGCAG
CAGCAAATTTTATCGCATTTAAATCTAGACGGACCAAACTCTAATCTGAAGGTGACACTA
GGAGGTGGAGAGCTAGTGGAGGGCAGATTATTAGCAGCCTTGAGAGCTGTCCTATCAAAC
GATGAAGAAGCAGTGAAGCAGCACGACTTGGAGACGCTCAAATCATTGACAGTCGAAGCC
CCTCTGGGAATATCGACTGAAGTATTAGCTCTTCGCACCGTTGTGGCTTTGTGTGTAATT
GCTCTCGGACATTTCCCAACAAAAATCATGGAGGACGAGTCGTTGCTGAAGCAGAATGTT
TCACCTACTACTGAGTTGGCTCTCCAGTTCATAATACAAAAGAAGTCCCTCATTGTGGAT
GTCATGAGGGATCTTAGCAAGAAGGTAAAGTCACTCCTTGCCAAGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400017173
PEP Infomation

pacid=37435151 transcript=PGSC0003DMT400025176 locus=PGSC0003DMG400009729 ID=PGSC0003DMT400025176.v4.03 annot-version=v4.03
Sequence

MSSKMMLMANSLTHVRPLTCATAAAAAAVYPSRLVAQPPDLIKWVKIEGGFVHKSIKIAQ
GDSFGLGLVASEDIPKGSDLIALPQHIPLKFDGSSSESENSHSALIKLAQHVPEELWAMK
LGLKLLQERARKGSFWWPYISNLPETYSVPIFFPGEDIKNLQYAPLLYQVNKRCRFLLEF
GKILKHELENLKPDDHPFSCQDVDSSALGWAMSAVSSRAFRLYGGKRPDGTRSNVPMMLP
LIDMCNHSFDPNAEIVQEEANSDRNMLVKVVAGKEIKQNDPLLLNYGCLSSDLFLLDYGF
VIPSNPYDCIELKYDAALLDAASMAAGVSSPSFSSPSPWQQQILSHLNLDGPNSNLKVTL
GGGELVEGRLLAALRAVLSNDEEAVKQHDLETLKSLTVEAPLGISTEVLALRTVVALCVI
ALGHFPTKIMEDESLLKQNVSPTTELALQFIIQKKSLIVDVMRDLSKKVKSLLAK*

Transcript Sequence

Transcript ID

PGSC0003DMT400025176
Transcript Infomation

pacid=37435151 locus=PGSC0003DMG400009729 ID=PGSC0003DMT400025176.v4.03 annot-version=v4.03
Sequence

ATGTCGAGCAAAATGATGCTAATGGCTAACTCCTTAACACACGTCCGTCCTCTCACTTGC
GCCACCGCCGCCGCCGCCGCCGCTGTTTACCCATCACGGCTAGTGGCACAACCACCGGAC
CTCATCAAATGGGTGAAAATTGAAGGTGGGTTTGTTCACAAATCCATTAAAATAGCACAA
GGTGATTCCTTTGGCCTTGGATTAGTTGCTTCTGAAGATATCCCAAAAGGGTCTGATCTT
ATTGCCTTACCTCAACATATTCCCCTCAAATTTGATGGGTCTTCTTCAGAATCAGAAAAT
TCCCATTCTGCTTTGATTAAATTAGCTCAGCATGTTCCTGAGGAGCTGTGGGCTATGAAA
TTGGGTTTGAAGCTTCTGCAAGAGAGAGCAAGGAAAGGTTCGTTCTGGTGGCCATACATC
AGCAATCTCCCAGAGACTTACTCAGTGCCGATTTTCTTTCCTGGAGAGGATATAAAGAAC
TTGCAGTATGCCCCTCTTCTTTATCAGGTGAACAAAAGATGCCGGTTTCTACTGGAATTT
GGGAAAATTCTGAAGCATGAACTCGAGAATCTTAAACCTGATGATCATCCTTTTAGTTGC
CAAGATGTGGATTCATCTGCTCTAGGATGGGCTATGTCAGCTGTTTCATCTCGAGCATTC
CGGTTGTATGGCGGTAAACGTCCTGATGGCACCCGCAGTAATGTTCCTATGATGCTTCCA
CTTATTGATATGTGCAACCACAGCTTTGATCCAAATGCTGAAATTGTACAGGAAGAAGCA
AACTCCGATAGAAATATGCTTGTAAAGGTGGTTGCAGGAAAGGAGATAAAGCAAAATGAT
CCATTGCTACTCAACTATGGCTGTTTAAGTAGTGATCTTTTTCTTTTGGACTATGGATTC
GTCATTCCATCAAACCCCTATGACTGCATCGAACTTAAATATGATGCTGCTCTTCTTGAT
GCTGCCAGTATGGCTGCAGGGGTTTCATCCCCAAGCTTCTCCTCGCCATCCCCATGGCAG
CAGCAAATTTTATCGCATTTAAATCTAGACGGACCAAACTCTAATCTGAAGGTGACACTA
GGAGGTGGAGAGCTAGTGGAGGGCAGATTATTAGCAGCCTTGAGAGCTGTCCTATCAAAC
GATGAAGAAGCAGTGAAGCAGCACGACTTGGAGACGCTCAAATCATTGACAGTCGAAGCC
CCTCTGGGAATATCGACTGAAGTATTAGCTCTTCGCACCGTTGTGGCTTTGTGTGTAATT
GCTCTCGGACATTTCCCAACAAAAATCATGGAGGACGAGTCGTTGCTGAAGCAGAATGTT
TCACCTACTACTGAGTTGGCTCTCCAGTTCATAATACAAAAGAAGTCCCTCATTGTGGAT
GTCATGAGGGATCTTAGCAAGAAGGTAAAGTCACTCCTTGCCAAGTAG