Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400025146
CDS Infomation

pacid=37458720 polypeptide=PGSC0003DMP400017156 locus=PGSC0003DMG400009717 ID=PGSC0003DMT400025146.v4.03 annot-version=v4.03
Sequence

ATGGCAAGCCAACTGCAACAAGCACTGAGGAGCCTTTGTTGCAATACTCCTTGGAAGTAT
GCTGTGTTCTGGAAGCTCACACATCGAGCTCGTATGATGTTGACTTGGGAGGATGCTTAC
TATGATAACGATGGGTTTCCAGGGAAAAAATCTCCTGGTAGTACAGCAGGCAACCTTTAT
GATGGACATTATTCCAACAATCATCTTGGAGTAGCTGTGGCAAAGATGTCCTATCATGTT
TATTCTCTTGGAGAAGGTATTGTTGGGCAGGTTGCAATTACTGGAAAACATCTATGGCTT
TCAGCAGACAAAGTTGCAGCTATCACCAGCTTGGCGCCTGAGCACTGTGATGGGTGGCAA
GCTCAATTTTCTGCTGGGATTAAGACCATTGTTGTTGCTGCTGTTGCTCCACATGGAGTT
ATACAACTTGGATCCTTGGATAGTATCCCTGAGGATTTGAGGGCGATCAAGCATATTAGA
GATGTCTTTTCTGAGCTCCAGGAGTTGATGGCAAGTTGCTTGCGGAGTTCGATGCAGTAC
AGCATGGAAAATTCTTGCTTGTCAGAGATATCGACAAGAACCTCAGGTTCAGAGGTTTTT
CAAGACTGCGTAAATAATCTAGGTAGAAGTGTTTGTGAAGATGGGAGAAATATGTGGTCT
CCTCTATATACATCTGTTGAAAAATCTGTTGATCATTCTTGTATCTTCTCACAACCTGGA
GGTTTCCCAAATAAAATACTTGAAGCGGTACATAACCAAGGACTTCACAGGACTTCAGTT
CAAGGATCTGATGACTCTGAGAATCTGCTTCCGGCAAGCTGTGAAAGTTCCATTATAAAA
CACCAAGAGGAAGGGCAAATGTGGGAAGAAACTGATCCAAAGTTTGAAGGGCAAACTAGC
AACTTGAGAGTCTTGGGGAAGGGCTCGGTAGATAAATGTGAGCCAACTTTTAGAAGTGAT
GCAAGTATTGGAAGTGTTTCATATGATGCTGGACAAGTCACGGAATGCCCTCAGCCAAAT
AGAAACAATCTTGCTTCTGAAGCTGACAATGATCGAAACAGAAAGTTGGGTTTGTCGGAT
CTTCCCAATGCATATGCAGATAAATGTGCTGAGACAAATTTAGGTTTTGAGACACAGTGT
AATGACACGATGCACACTCCTTTCAGGTTCTGTGCTGGCTATGAACTATACGAAGCATTA
GGGCCAGTTTTCCAGAAAGGGAATTCTTCCAAGGACTGGGAGGCAGGGAAGCGGGAAGAA
ATGGCTGTTGACATGCTTGAGGGAATTGGCACCAGCAGTCTGGTAATGAGCAACACTGGC
AATGAGCATCTTCTAGAAGCAGTAATAGCTAATGTTAACCGCTATGACAATGATTGTAGC
AGTGTCAAGTCATTCTGTAAATCTGTTGATTCCCTCTTGACCACTGAAATAACTGCCGAA
CCTTGTAGCAGTGATATCGGCGCAATCAGTTCTATAGGCTATTCATTTGATCGGGAAACA
TTGAACAGCTTCAACTCATCAGGTACATGTAGTATTCGGTCTTCTAGGGGTCTTTCATCA
ACCAGTTGTAGCAGAGGTAGCGGACATGTTGAGAGGCCACTTGAACCCGTTAAAATGCAT
AAAAAGAGAGCTAGACCTGGTGAAAGTTGCCGACCTAGACCCAGGGATAGACAATTGATC
CAAGATCGCATCAAGGAGCTCCGTGATCTTGTTCCAAATGGTTCGAAGTGCAGTATAGAC
TCACTTCTAGAACGAACAATCAAACACATGCTCTTCATGCAAAGTGTTACCAAGCATGCT
GACAAGCTAAGTAAATGCTCTGCATCAAAGCTGGTTGACAAAGAATCGGATATCTGTGGA
TCTTCCTCCCATGAGGTTGGTTCAAGCTGGGCAGTGGAAGTTGGAAATAACCAAAAAGTT
TGTCCGATGAGGGTTGAAAACTTAGGCATGAATGGTCAAATGCTTGTCGAAATCTTCGAA
GACGGAAGCCATTTCCTTGACATAGCAGAAGCCATCCGGAGCTTGGGTCTTACAATTTTA
AAAGGTCTGGCTGAGGCTTATAGTGAGAGGACGCGCATGTGTTTTGTGGTTGAGGGGCAG
AATGATAGAACCTTGCATCGCATGGATGTATTATGGTCTCTTATGCAGCTACTGCAAGCA
AAGATCAACGTGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400017156
PEP Infomation

pacid=37458720 transcript=PGSC0003DMT400025146 locus=PGSC0003DMG400009717 ID=PGSC0003DMT400025146.v4.03 annot-version=v4.03
Sequence

MASQLQQALRSLCCNTPWKYAVFWKLTHRARMMLTWEDAYYDNDGFPGKKSPGSTAGNLY
DGHYSNNHLGVAVAKMSYHVYSLGEGIVGQVAITGKHLWLSADKVAAITSLAPEHCDGWQ
AQFSAGIKTIVVAAVAPHGVIQLGSLDSIPEDLRAIKHIRDVFSELQELMASCLRSSMQY
SMENSCLSEISTRTSGSEVFQDCVNNLGRSVCEDGRNMWSPLYTSVEKSVDHSCIFSQPG
GFPNKILEAVHNQGLHRTSVQGSDDSENLLPASCESSIIKHQEEGQMWEETDPKFEGQTS
NLRVLGKGSVDKCEPTFRSDASIGSVSYDAGQVTECPQPNRNNLASEADNDRNRKLGLSD
LPNAYADKCAETNLGFETQCNDTMHTPFRFCAGYELYEALGPVFQKGNSSKDWEAGKREE
MAVDMLEGIGTSSLVMSNTGNEHLLEAVIANVNRYDNDCSSVKSFCKSVDSLLTTEITAE
PCSSDIGAISSIGYSFDRETLNSFNSSGTCSIRSSRGLSSTSCSRGSGHVERPLEPVKMH
KKRARPGESCRPRPRDRQLIQDRIKELRDLVPNGSKCSIDSLLERTIKHMLFMQSVTKHA
DKLSKCSASKLVDKESDICGSSSHEVGSSWAVEVGNNQKVCPMRVENLGMNGQMLVEIFE
DGSHFLDIAEAIRSLGLTILKGLAEAYSERTRMCFVVEGQNDRTLHRMDVLWSLMQLLQA
KINV*

Transcript Sequence

Transcript ID

PGSC0003DMT400025146
Transcript Infomation

pacid=37458720 locus=PGSC0003DMG400009717 ID=PGSC0003DMT400025146.v4.03 annot-version=v4.03
Sequence

ATGGCAAGCCAACTGCAACAAGCACTGAGGAGCCTTTGTTGCAATACTCCTTGGAAGTAT
GCTGTGTTCTGGAAGCTCACACATCGAGCTCGTATGATGTTGACTTGGGAGGATGCTTAC
TATGATAACGATGGGTTTCCAGGGAAAAAATCTCCTGGTAGTACAGCAGGCAACCTTTAT
GATGGACATTATTCCAACAATCATCTTGGAGTAGCTGTGGCAAAGATGTCCTATCATGTT
TATTCTCTTGGAGAAGGTATTGTTGGGCAGGTTGCAATTACTGGAAAACATCTATGGCTT
TCAGCAGACAAAGTTGCAGCTATCACCAGCTTGGCGCCTGAGCACTGTGATGGGTGGCAA
GCTCAATTTTCTGCTGGGATTAAGACCATTGTTGTTGCTGCTGTTGCTCCACATGGAGTT
ATACAACTTGGATCCTTGGATAGTATCCCTGAGGATTTGAGGGCGATCAAGCATATTAGA
GATGTCTTTTCTGAGCTCCAGGAGTTGATGGCAAGTTGCTTGCGGAGTTCGATGCAGTAC
AGCATGGAAAATTCTTGCTTGTCAGAGATATCGACAAGAACCTCAGGTTCAGAGGTTTTT
CAAGACTGCGTAAATAATCTAGGTAGAAGTGTTTGTGAAGATGGGAGAAATATGTGGTCT
CCTCTATATACATCTGTTGAAAAATCTGTTGATCATTCTTGTATCTTCTCACAACCTGGA
GGTTTCCCAAATAAAATACTTGAAGCGGTACATAACCAAGGACTTCACAGGACTTCAGTT
CAAGGATCTGATGACTCTGAGAATCTGCTTCCGGCAAGCTGTGAAAGTTCCATTATAAAA
CACCAAGAGGAAGGGCAAATGTGGGAAGAAACTGATCCAAAGTTTGAAGGGCAAACTAGC
AACTTGAGAGTCTTGGGGAAGGGCTCGGTAGATAAATGTGAGCCAACTTTTAGAAGTGAT
GCAAGTATTGGAAGTGTTTCATATGATGCTGGACAAGTCACGGAATGCCCTCAGCCAAAT
AGAAACAATCTTGCTTCTGAAGCTGACAATGATCGAAACAGAAAGTTGGGTTTGTCGGAT
CTTCCCAATGCATATGCAGATAAATGTGCTGAGACAAATTTAGGTTTTGAGACACAGTGT
AATGACACGATGCACACTCCTTTCAGGTTCTGTGCTGGCTATGAACTATACGAAGCATTA
GGGCCAGTTTTCCAGAAAGGGAATTCTTCCAAGGACTGGGAGGCAGGGAAGCGGGAAGAA
ATGGCTGTTGACATGCTTGAGGGAATTGGCACCAGCAGTCTGGTAATGAGCAACACTGGC
AATGAGCATCTTCTAGAAGCAGTAATAGCTAATGTTAACCGCTATGACAATGATTGTAGC
AGTGTCAAGTCATTCTGTAAATCTGTTGATTCCCTCTTGACCACTGAAATAACTGCCGAA
CCTTGTAGCAGTGATATCGGCGCAATCAGTTCTATAGGCTATTCATTTGATCGGGAAACA
TTGAACAGCTTCAACTCATCAGGTACATGTAGTATTCGGTCTTCTAGGGGTCTTTCATCA
ACCAGTTGTAGCAGAGGTAGCGGACATGTTGAGAGGCCACTTGAACCCGTTAAAATGCAT
AAAAAGAGAGCTAGACCTGGTGAAAGTTGCCGACCTAGACCCAGGGATAGACAATTGATC
CAAGATCGCATCAAGGAGCTCCGTGATCTTGTTCCAAATGGTTCGAAGTGCAGTATAGAC
TCACTTCTAGAACGAACAATCAAACACATGCTCTTCATGCAAAGTGTTACCAAGCATGCT
GACAAGCTAAGTAAATGCTCTGCATCAAAGCTGGTTGACAAAGAATCGGATATCTGTGGA
TCTTCCTCCCATGAGGTTGGTTCAAGCTGGGCAGTGGAAGTTGGAAATAACCAAAAAGTT
TGTCCGATGAGGGTTGAAAACTTAGGCATGAATGGTCAAATGCTTGTCGAAATCTTCGAA
GACGGAAGCCATTTCCTTGACATAGCAGAAGCCATCCGGAGCTTGGGTCTTACAATTTTA
AAAGGTCTGGCTGAGGCTTATAGTGAGAGGACGCGCATGTGTTTTGTGGTTGAGGGGCAG
AATGATAGAACCTTGCATCGCATGGATGTATTATGGTCTCTTATGCAGCTACTGCAAGCA
AAGATCAACGTGTAG