Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400025139
CDS Infomation

pacid=37456739 polypeptide=PGSC0003DMP400017151 locus=PGSC0003DMG400009715 ID=PGSC0003DMT400025139.v4.03 annot-version=v4.03
Sequence

ATGTCAAACTTTGTTTCAAGTTGGGCTAAAAACATTGTCACCCTGCCTGAAAATTATGTA
ATGCCACCTGATAAAAGGCCTAATGAACCTGTCTCAATTGGTAACAATATTCCAGTAATT
GATCTAGCAAAAGCATCATCAAGCACAATTAATCATGCTGAATTAGTCCAAGAAATACTA
AAAGCTAGTCAAGAATTTGGTTTATTTCAGATCATAAACCATGGAGTATCTGAGAAACTG
ATGGATGATGTGATGGATTTATTCAAGGAGTTATTCGATATGTCTGTCGAGATGAAGGAT
AAGTTATTCTCTGAGGATTCAAATAAGAGCTGTAAAGTGTTTGGAAATCGATATATCAAT
GGAGAAATTCGTTACTGGAGAGATCTTCTCATACAACCTGTGATTCCCATTCAAGAAGAC
ACACAACATTGGCTCGAAAATCCAGCTAGATATAGGGAACTGGTTGAAACATATTCAACT
GAAGTGAGGAAGTTATGCACGACGATAGTGGAGCTGATAGGTGAAGGACTGGGAGTAGAA
TTAGGGGAGGAAATGATCAAAGACCAAGCCCTGGGGGCTAACTATTACCCACCTTGTCCA
GACCCAAGTTCAGCCATGGGTTCGCCTCCTCATTGCGATCCCAACATCATTACCTTCCTT
CAACAACAAGTTTATGGACTTCAAATTTTCAAAGATGGTCACTGGATTGGTGTTCAACCA
CTTCCCTATGCATTCGTTGTCATCATTGGTTACCAGATGCAGATTATCAGCAACAATAAG
CTAGTAGCTTGTGAACACCGTGCAGTTACAAATTCAGAAAGTGGTCGAATAACACTAGGG
ACCTTTGTTTCTCCTGCTGGAGATTGTGTAGTGGAACCAGCAAAGGCTCTTGTCAATGGT
GACAGTCCTGCACTCTATCGCGCTTTCAAATATGAGGAGTTCATGAATGACTTTATGGCC
GGAAAGGAACCACATAAGACATTGACACTAGACAACATTAGTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400017151
PEP Infomation

pacid=37456739 transcript=PGSC0003DMT400025139 locus=PGSC0003DMG400009715 ID=PGSC0003DMT400025139.v4.03 annot-version=v4.03
Sequence

MSNFVSSWAKNIVTLPENYVMPPDKRPNEPVSIGNNIPVIDLAKASSSTINHAELVQEIL
KASQEFGLFQIINHGVSEKLMDDVMDLFKELFDMSVEMKDKLFSEDSNKSCKVFGNRYIN
GEIRYWRDLLIQPVIPIQEDTQHWLENPARYRELVETYSTEVRKLCTTIVELIGEGLGVE
LGEEMIKDQALGANYYPPCPDPSSAMGSPPHCDPNIITFLQQQVYGLQIFKDGHWIGVQP
LPYAFVVIIGYQMQIISNNKLVACEHRAVTNSESGRITLGTFVSPAGDCVVEPAKALVNG
DSPALYRAFKYEEFMNDFMAGKEPHKTLTLDNIS*

Transcript Sequence

Transcript ID

PGSC0003DMT400025139
Transcript Infomation

pacid=37456739 locus=PGSC0003DMG400009715 ID=PGSC0003DMT400025139.v4.03 annot-version=v4.03
Sequence

ATGTCAAACTTTGTTTCAAGTTGGGCTAAAAACATTGTCACCCTGCCTGAAAATTATGTA
ATGCCACCTGATAAAAGGCCTAATGAACCTGTCTCAATTGGTAACAATATTCCAGTAATT
GATCTAGCAAAAGCATCATCAAGCACAATTAATCATGCTGAATTAGTCCAAGAAATACTA
AAAGCTAGTCAAGAATTTGGTTTATTTCAGATCATAAACCATGGAGTATCTGAGAAACTG
ATGGATGATGTGATGGATTTATTCAAGGAGTTATTCGATATGTCTGTCGAGATGAAGGAT
AAGTTATTCTCTGAGGATTCAAATAAGAGCTGTAAAGTGTTTGGAAATCGATATATCAAT
GGAGAAATTCGTTACTGGAGAGATCTTCTCATACAACCTGTGATTCCCATTCAAGAAGAC
ACACAACATTGGCTCGAAAATCCAGCTAGATATAGGGAACTGGTTGAAACATATTCAACT
GAAGTGAGGAAGTTATGCACGACGATAGTGGAGCTGATAGGTGAAGGACTGGGAGTAGAA
TTAGGGGAGGAAATGATCAAAGACCAAGCCCTGGGGGCTAACTATTACCCACCTTGTCCA
GACCCAAGTTCAGCCATGGGTTCGCCTCCTCATTGCGATCCCAACATCATTACCTTCCTT
CAACAACAAGTTTATGGACTTCAAATTTTCAAAGATGGTCACTGGATTGGTGTTCAACCA
CTTCCCTATGCATTCGTTGTCATCATTGGTTACCAGATGCAGATTATCAGCAACAATAAG
CTAGTAGCTTGTGAACACCGTGCAGTTACAAATTCAGAAAGTGGTCGAATAACACTAGGG
ACCTTTGTTTCTCCTGCTGGAGATTGTGTAGTGGAACCAGCAAAGGCTCTTGTCAATGGT
GACAGTCCTGCACTCTATCGCGCTTTCAAATATGAGGAGTTCATGAATGACTTTATGGCC
GGAAAGGAACCACATAAGACATTGACACTAGACAACATTAGTTAG