Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400025123
CDS Infomation

pacid=37427892 polypeptide=PGSC0003DMP400017137 locus=PGSC0003DMG400009707 ID=PGSC0003DMT400025123.v4.03 annot-version=v4.03
Sequence

ATGGGAGAACCACAAGTAGAAAATCAGCTCAACATTTCTTTTGAAGAGGAAGTAAATATG
GCCAATAATTCAACTTCATGGCGTGAAAAATACAAGAGATGGATTGAAATAGGGTTCAAT
GCCGTATTGATTCTAGTTTGTCTATCAGCTGCAACACTTCTCGGCGAACTTTACTACAGA
GAAGGTGGAAAAAGCACTTGGATGAATTCACTTGTCCAAATGGTTGGATTTCCGATACTT
TTCCCTATTCTCCTCTTGAAGAAGAGGGAAGAAAACAGAGAGGACGAAGAACATATGCAC
AAGAATACTATTAATAGTAATAATAAAAATCCATCCGTTTGGATGTTTTTATCCGTCTAT
GTTTTTCTCGGATTACTGTTAGGCGGAAGCTGTATTTTGAATGCAGTCGGACTATTACAC
CTCCCCGTTTCAACATTTTCATTGATTTCCGCTAGCCAATTGGGATTCAATGCCCTGTTT
TCCTTCTTCCTCAATTCCCAAAAAATAACAACTTATATAGCTAATTCCATTATCCTACTC
ACAATATCCTCAATTCTCCTTGTCTTCCAACCTGACGATTCCTCATCAACCGATTCATCG
AAAGGGAAAGGCTACGTTTTAATCGGATTCATCTGCACTCTCTTCGGTTCAGCAGGGTAC
GCGTTGCTGTTATCAGCCACAGAGCGAATTTTCAGAAATGTAATGAAAAAACGCACATTG
AAAGAGGTGATGAGCGTTGTGATCTGGCAATCGTTTTTCGCCACCTGTGCGATTCTAATT
GGCCTATTCGCGAGCGGCGAATGGAGATGGATTAAAACAGAGATGAATGAATACAAGCTT
GGGAAAGTGTCATATGTAATGACATTAGTGTGGAATGCATTAGCTTGGCAGATTTACACA
ATTGGTTTACTAAGTTTGATTATGAAAGTATCTGCATTATTTGCTAATGTGATTACTGCA
TTAAGTGTGCCACTAATTCCAGTTCTTGCTCTCATTTTTTTCAATGAGAAAATGAGTGGA
GTGAAAGTAATTTCAATGATTTTGGCAATTTGGGGATTTTTATCATATGGTTATCAGCAG
TATCTTGATGAAGTTAAGCTCAAAATTGAGTTATCAAAGGCAAAAGAAGAAGCTGAAGTA
TCACTTGTTGAAACAGGATTGAATCATAGAGCTAATTAA

Peptide Sequence

PEP ID

PGSC0003DMP400017137
PEP Infomation

pacid=37427892 transcript=PGSC0003DMT400025123 locus=PGSC0003DMG400009707 ID=PGSC0003DMT400025123.v4.03 annot-version=v4.03
Sequence

MGEPQVENQLNISFEEEVNMANNSTSWREKYKRWIEIGFNAVLILVCLSAATLLGELYYR
EGGKSTWMNSLVQMVGFPILFPILLLKKREENREDEEHMHKNTINSNNKNPSVWMFLSVY
VFLGLLLGGSCILNAVGLLHLPVSTFSLISASQLGFNALFSFFLNSQKITTYIANSIILL
TISSILLVFQPDDSSSTDSSKGKGYVLIGFICTLFGSAGYALLLSATERIFRNVMKKRTL
KEVMSVVIWQSFFATCAILIGLFASGEWRWIKTEMNEYKLGKVSYVMTLVWNALAWQIYT
IGLLSLIMKVSALFANVITALSVPLIPVLALIFFNEKMSGVKVISMILAIWGFLSYGYQQ
YLDEVKLKIELSKAKEEAEVSLVETGLNHRAN*

Transcript Sequence

Transcript ID

PGSC0003DMT400025123
Transcript Infomation

pacid=37427892 locus=PGSC0003DMG400009707 ID=PGSC0003DMT400025123.v4.03 annot-version=v4.03
Sequence

ATGGGAGAACCACAAGTAGAAAATCAGCTCAACATTTCTTTTGAAGAGGAAGTAAATATG
GCCAATAATTCAACTTCATGGCGTGAAAAATACAAGAGATGGATTGAAATAGGGTTCAAT
GCCGTATTGATTCTAGTTTGTCTATCAGCTGCAACACTTCTCGGCGAACTTTACTACAGA
GAAGGTGGAAAAAGCACTTGGATGAATTCACTTGTCCAAATGGTTGGATTTCCGATACTT
TTCCCTATTCTCCTCTTGAAGAAGAGGGAAGAAAACAGAGAGGACGAAGAACATATGCAC
AAGAATACTATTAATAGTAATAATAAAAATCCATCCGTTTGGATGTTTTTATCCGTCTAT
GTTTTTCTCGGATTACTGTTAGGCGGAAGCTGTATTTTGAATGCAGTCGGACTATTACAC
CTCCCCGTTTCAACATTTTCATTGATTTCCGCTAGCCAATTGGGATTCAATGCCCTGTTT
TCCTTCTTCCTCAATTCCCAAAAAATAACAACTTATATAGCTAATTCCATTATCCTACTC
ACAATATCCTCAATTCTCCTTGTCTTCCAACCTGACGATTCCTCATCAACCGATTCATCG
AAAGGGAAAGGCTACGTTTTAATCGGATTCATCTGCACTCTCTTCGGTTCAGCAGGGTAC
GCGTTGCTGTTATCAGCCACAGAGCGAATTTTCAGAAATGTAATGAAAAAACGCACATTG
AAAGAGGTGATGAGCGTTGTGATCTGGCAATCGTTTTTCGCCACCTGTGCGATTCTAATT
GGCCTATTCGCGAGCGGCGAATGGAGATGGATTAAAACAGAGATGAATGAATACAAGCTT
GGGAAAGTGTCATATGTAATGACATTAGTGTGGAATGCATTAGCTTGGCAGATTTACACA
ATTGGTTTACTAAGTTTGATTATGAAAGTATCTGCATTATTTGCTAATGTGATTACTGCA
TTAAGTGTGCCACTAATTCCAGTTCTTGCTCTCATTTTTTTCAATGAGAAAATGAGTGGA
GTGAAAGTAATTTCAATGATTTTGGCAATTTGGGGATTTTTATCATATGGTTATCAGCAG
TATCTTGATGAAGTTAAGCTCAAAATTGAGTTATCAAAGGCAAAAGAAGAAGCTGAAGTA
TCACTTGTTGAAACAGGATTGAATCATAGAGCTAATTAA