Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400025107
CDS Infomation

pacid=37462758 polypeptide=PGSC0003DMP400017126 locus=PGSC0003DMG400009699 ID=PGSC0003DMT400025107.v4.03 annot-version=v4.03
Sequence

ATGGGAGAAGCTCCAGCTTTCTTTGCTGATAGTCTCTTGGGAGATTTTCCAAATGGGGTC
GATTTGAAATCAGAAGGCCACAAAACAGCTATTTGTATCGGGTCTAAAATTTATGTGATT
GGCGGGGCTGATCATGAATCGACAGCGGTCATTGGAGTTCAAATCTTTGAGAAATCTAGT
GGGGAATGGATAAACCCCACTGTACTGGGTACTAAACCCAAGGTGTCAAATGGCCACTCA
GCTGTTCTTTTAAATGGTGATCGTATATTGGTTATTAAGGGAAATTCCAAGTCTGATGGA
TGCTTTTGGTTTCTTGAGGTGGGCACCCCATTTATAAGAGAACAAGAAAAGACACATGGG
AATGAGGTGGTTGCCTGGAGTAAGGGAGTTTTAGGTAATGTGGAGAAGCCTATTGTCATT
AGTGGCCCTTCTGGAGTGGGGAAGGGTACCTTGATATCTGAACTAATGAAAGAGTTCCCA
TCTATGTTTGGATTTTCTGTGAGCCACACAACCCGGGCACCAAGAGAAAAAGAGCAGAAT
GGATTTCATTACCATTTCAGTGACCGCAGTGTAATGGAGAGAGAGATAAAGGATGGGAAA
TTCCTGGAGTTTGCTTCTGTTCATGGTAATCTTTATGGAACCAGTGTCGAAGCAGTTGAG
GTGGTTGCTGATGCTGGCAAGAGATGCATCCTCGATATTGATGTTCAAGGTGCAAGGTCT
GTGAGAGCTAGCTCTCTTGATGCTATTTTCATTTTTATATCTCCACCATCATTTGAAGAA
CTTGAGAAGCGCCTTCGTGCAAGAGCAACTGAGACTGAAGAGCAAATCCAAAAGCGTCTC
CGAAATGCTAGGGCGGAACTCGAACAAGGAAAATCATCAGGCCTCTTTGATCATATTTTG
GTGAACGATGACCTAGAAAGTTGTTATGAGAATCTTAAGAACATCTTGGGTCTCACTGAA
GGTGTGAAGACTGCTCATAAAACATATCCAGAATTAGTCGACTTGCCTGTTGAACATTTA
GTCTCGAAGATTGATCAGAAGATTTTAATTAACTGTGGTGCTGGAGAATATCAAAAGGCA
TCAGATAACATGTATGTTCTGGACTTGTCTTTGCTCAAAGGAGGGGCCCCAGGACGGACA
CGAGGACTAAATCTATTTGTCACCAATCCTTCCACTGATAGAGTAAATGGCGACAATCAG
CTGAGCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400017126
PEP Infomation

pacid=37462758 transcript=PGSC0003DMT400025107 locus=PGSC0003DMG400009699 ID=PGSC0003DMT400025107.v4.03 annot-version=v4.03
Sequence

MGEAPAFFADSLLGDFPNGVDLKSEGHKTAICIGSKIYVIGGADHESTAVIGVQIFEKSS
GEWINPTVLGTKPKVSNGHSAVLLNGDRILVIKGNSKSDGCFWFLEVGTPFIREQEKTHG
NEVVAWSKGVLGNVEKPIVISGPSGVGKGTLISELMKEFPSMFGFSVSHTTRAPREKEQN
GFHYHFSDRSVMEREIKDGKFLEFASVHGNLYGTSVEAVEVVADAGKRCILDIDVQGARS
VRASSLDAIFIFISPPSFEELEKRLRARATETEEQIQKRLRNARAELEQGKSSGLFDHIL
VNDDLESCYENLKNILGLTEGVKTAHKTYPELVDLPVEHLVSKIDQKILINCGAGEYQKA
SDNMYVLDLSLLKGGAPGRTRGLNLFVTNPSTDRVNGDNQLS*

Transcript Sequence

Transcript ID

PGSC0003DMT400025107
Transcript Infomation

pacid=37462758 locus=PGSC0003DMG400009699 ID=PGSC0003DMT400025107.v4.03 annot-version=v4.03
Sequence

ATGGGAGAAGCTCCAGCTTTCTTTGCTGATAGTCTCTTGGGAGATTTTCCAAATGGGGTC
GATTTGAAATCAGAAGGCCACAAAACAGCTATTTGTATCGGGTCTAAAATTTATGTGATT
GGCGGGGCTGATCATGAATCGACAGCGGTCATTGGAGTTCAAATCTTTGAGAAATCTAGT
GGGGAATGGATAAACCCCACTGTACTGGGTACTAAACCCAAGGTGTCAAATGGCCACTCA
GCTGTTCTTTTAAATGGTGATCGTATATTGGTTATTAAGGGAAATTCCAAGTCTGATGGA
TGCTTTTGGTTTCTTGAGGTGGGCACCCCATTTATAAGAGAACAAGAAAAGACACATGGG
AATGAGGTGGTTGCCTGGAGTAAGGGAGTTTTAGGTAATGTGGAGAAGCCTATTGTCATT
AGTGGCCCTTCTGGAGTGGGGAAGGGTACCTTGATATCTGAACTAATGAAAGAGTTCCCA
TCTATGTTTGGATTTTCTGTGAGCCACACAACCCGGGCACCAAGAGAAAAAGAGCAGAAT
GGATTTCATTACCATTTCAGTGACCGCAGTGTAATGGAGAGAGAGATAAAGGATGGGAAA
TTCCTGGAGTTTGCTTCTGTTCATGGTAATCTTTATGGAACCAGTGTCGAAGCAGTTGAG
GTGGTTGCTGATGCTGGCAAGAGATGCATCCTCGATATTGATGTTCAAGGTGCAAGGTCT
GTGAGAGCTAGCTCTCTTGATGCTATTTTCATTTTTATATCTCCACCATCATTTGAAGAA
CTTGAGAAGCGCCTTCGTGCAAGAGCAACTGAGACTGAAGAGCAAATCCAAAAGCGTCTC
CGAAATGCTAGGGCGGAACTCGAACAAGGAAAATCATCAGGCCTCTTTGATCATATTTTG
GTGAACGATGACCTAGAAAGTTGTTATGAGAATCTTAAGAACATCTTGGGTCTCACTGAA
GGTGTGAAGACTGCTCATAAAACATATCCAGAATTAGTCGACTTGCCTGTTGAACATTTA
GTCTCGAAGATTGATCAGAAGATTTTAATTAACTGTGGTGCTGGAGAATATCAAAAGGCA
TCAGATAACATGTATGTTCTGGACTTGTCTTTGCTCAAAGGAGGGGCCCCAGGACGGACA
CGAGGACTAAATCTATTTGTCACCAATCCTTCCACTGATAGAGTAAATGGCGACAATCAG
CTGAGCTAA