Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400024968
CDS Infomation

pacid=37469032 polypeptide=PGSC0003DMP400017045 locus=PGSC0003DMG400009648 ID=PGSC0003DMT400024968.v4.03 annot-version=v4.03
Sequence

ATGTCATTTTCTTATGCTAAATACTCTGGTTTCTTCTCTAGTGATCTCCTTCCTTCTCTT
GGAACCAAAATCAACCACGAAACAAAGCTTCGAAAATATATCATTTCGCCTTTGGATCTT
CGTTATAGGGCTTGGGAGATGTTTCTACTATTTCTTGTCATCTACACGGCGTGGATTACG
CCTTTCGAGTTTGCATTTCTGATATGCAAAATAGATGCCTTGGTCATCTTTGACAACATT
GTCAACTGCTTCTTTGCTATTGACATTTTCCTTAACTTCTTCATGGCTTATCTTGATAAA
GAATCTTATATTCTTGTTGATGATCCTAAAAAGATAGCAATAAGGTACTTATCAACCTGG
TTCATATTTGATGTTTGTTCCACTGTACCATTTCATGATTTCCTCTTTATTGATCACAAA
GAGAGCGGCGTTGGATTTAAGTTGCTCAGTATGCTCAGACTTTGGCGTCTTAGAAGAGTC
AGTGCCCTGTTTGCAAGGCTTGAGAAGGACATCCGTTTTAACTATTTCTGGACACGATAT
GCAAAACTGATATCTGTAACTTTGTTTGCAGTGCATTGTGCTGGATGTTTTAACTATGTG
ATTGCAGATAGATATCCTGATACTAAAAGAACATGGATTGGTGCAGCAAATCCCAATTTC
AAACAAGATAGCCTGTGGGATAGATATATAACTTCATTATATTGGTCTATTGTAACACTA
ACAACAACTGGTTATGGAGATTTACATGCTGAGAACACAAGGGAAATGCTCTTTGACATC
TTTTACATGTTGTTCAACTTGGGATTGACATCTTACATCATTAGTAATATGACAAATCTT
GTAGTTCACTGGACCGGCTACACAAGAAACTTCAGGGATAATGTAGAAGCAGCACAAGAA
TTCGCGAAACGAAATCAGTTGTCACCAAGGATACAAGATCAGGTTTTGTCTCATATCTGT
CTTAAGTTCAAAACTGAATCACTGCAACAAAAAGAGACCATCAATGTTCTGCCAAAAGCT
ATCAGATCAAGCATTGCACATTACCTGTTTTTACCAATAGTTCAAAATGTCAGTCTGTTC
CAAGGCGTTTCAAGGGACCTACTTTTCCAACTGGTTCCTGAAATGGAAGCTGAATACTAC
CCTCCCAAGGAAGATGTGATTTTACAGAATGAGTCTCAAACAGATTTTTACATAATAGTC
TCAGGAGCATTGGATCTACTAGTAGATATCGATGGACGTGAACAAATCATTGGGAAGGCT
GTTGCTGGAGAATCATTTGGAGAAATAGGTGTTTTACTTGGAAGGCCACAACCATATGCT
GTTAGAACAACTGAAATTTCTCAAATTTTATGTCTGAGTAGGAAAACATTTCTGAACATT
CTTCGCGACAATCAAGAAGATGAACGGATTATAATGAGAAATCTTATTCAGAAACTGCAA
GGATTTGGAGGCTTTGATAATGTGGACGAGGAAAGCGATCCAAGTTTAGTCTTCAACAAC
TTTTCTCATGTTTCTAAGCAAGATACACCAACCAATCTTAGCGACCTGATTAGTATAAAT
ATCCAAACTTTAGAAGCTAGAACCAAGAAACAAGTAGAAAATGAAGGTGAAAGTTGTGGA
CGTAAACGCCAAACAGTTCTTGATCATTCTGTAGTTCCCAAGGGGTGTATTGAAATGACT
CAGAGTCCACCAGAAAGAAGGTGGAAAGAAGATCAACTCGACACAGAACGTGGAGGAAAC
AAAAGCATCCATGAGGTCCCCTGCTGTTCTTATTCAGGTAATAGAAGTCAAACTGGTGCA
AAGGGGGGGAAATCTATCAAAAAGAGAGTTACTATTCACATGAGAAACAACATCAATTCA
TTGCAGGAGCAGAATGGGAAGCTAATAATACTACCTGATACACTAGAAGAGCTATTCAGA
ATGGCAGGTCAAAGATTTGGGGAGTACAATCTCAAGAAAGTTGTAAATGCAGAAGATGTA
GAAATAGATGAGACAGATGTCATTAGAGATGGAGATCACTTGTTCTTTCTTTCAACTGAT
TGCTCATGTGTAGAAACTAGTACAATGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400017045
PEP Infomation

pacid=37469032 transcript=PGSC0003DMT400024968 locus=PGSC0003DMG400009648 ID=PGSC0003DMT400024968.v4.03 annot-version=v4.03
Sequence

MSFSYAKYSGFFSSDLLPSLGTKINHETKLRKYIISPLDLRYRAWEMFLLFLVIYTAWIT
PFEFAFLICKIDALVIFDNIVNCFFAIDIFLNFFMAYLDKESYILVDDPKKIAIRYLSTW
FIFDVCSTVPFHDFLFIDHKESGVGFKLLSMLRLWRLRRVSALFARLEKDIRFNYFWTRY
AKLISVTLFAVHCAGCFNYVIADRYPDTKRTWIGAANPNFKQDSLWDRYITSLYWSIVTL
TTTGYGDLHAENTREMLFDIFYMLFNLGLTSYIISNMTNLVVHWTGYTRNFRDNVEAAQE
FAKRNQLSPRIQDQVLSHICLKFKTESLQQKETINVLPKAIRSSIAHYLFLPIVQNVSLF
QGVSRDLLFQLVPEMEAEYYPPKEDVILQNESQTDFYIIVSGALDLLVDIDGREQIIGKA
VAGESFGEIGVLLGRPQPYAVRTTEISQILCLSRKTFLNILRDNQEDERIIMRNLIQKLQ
GFGGFDNVDEESDPSLVFNNFSHVSKQDTPTNLSDLISINIQTLEARTKKQVENEGESCG
RKRQTVLDHSVVPKGCIEMTQSPPERRWKEDQLDTERGGNKSIHEVPCCSYSGNRSQTGA
KGGKSIKKRVTIHMRNNINSLQEQNGKLIILPDTLEELFRMAGQRFGEYNLKKVVNAEDV
EIDETDVIRDGDHLFFLSTDCSCVETSTM*

Transcript Sequence

Transcript ID

PGSC0003DMT400024968
Transcript Infomation

pacid=37469032 locus=PGSC0003DMG400009648 ID=PGSC0003DMT400024968.v4.03 annot-version=v4.03
Sequence

ATGTCATTTTCTTATGCTAAATACTCTGGTTTCTTCTCTAGTGATCTCCTTCCTTCTCTT
GGAACCAAAATCAACCACGAAACAAAGCTTCGAAAATATATCATTTCGCCTTTGGATCTT
CGTTATAGGGCTTGGGAGATGTTTCTACTATTTCTTGTCATCTACACGGCGTGGATTACG
CCTTTCGAGTTTGCATTTCTGATATGCAAAATAGATGCCTTGGTCATCTTTGACAACATT
GTCAACTGCTTCTTTGCTATTGACATTTTCCTTAACTTCTTCATGGCTTATCTTGATAAA
GAATCTTATATTCTTGTTGATGATCCTAAAAAGATAGCAATAAGGTACTTATCAACCTGG
TTCATATTTGATGTTTGTTCCACTGTACCATTTCATGATTTCCTCTTTATTGATCACAAA
GAGAGCGGCGTTGGATTTAAGTTGCTCAGTATGCTCAGACTTTGGCGTCTTAGAAGAGTC
AGTGCCCTGTTTGCAAGGCTTGAGAAGGACATCCGTTTTAACTATTTCTGGACACGATAT
GCAAAACTGATATCTGTAACTTTGTTTGCAGTGCATTGTGCTGGATGTTTTAACTATGTG
ATTGCAGATAGATATCCTGATACTAAAAGAACATGGATTGGTGCAGCAAATCCCAATTTC
AAACAAGATAGCCTGTGGGATAGATATATAACTTCATTATATTGGTCTATTGTAACACTA
ACAACAACTGGTTATGGAGATTTACATGCTGAGAACACAAGGGAAATGCTCTTTGACATC
TTTTACATGTTGTTCAACTTGGGATTGACATCTTACATCATTAGTAATATGACAAATCTT
GTAGTTCACTGGACCGGCTACACAAGAAACTTCAGGGATAATGTAGAAGCAGCACAAGAA
TTCGCGAAACGAAATCAGTTGTCACCAAGGATACAAGATCAGGTTTTGTCTCATATCTGT
CTTAAGTTCAAAACTGAATCACTGCAACAAAAAGAGACCATCAATGTTCTGCCAAAAGCT
ATCAGATCAAGCATTGCACATTACCTGTTTTTACCAATAGTTCAAAATGTCAGTCTGTTC
CAAGGCGTTTCAAGGGACCTACTTTTCCAACTGGTTCCTGAAATGGAAGCTGAATACTAC
CCTCCCAAGGAAGATGTGATTTTACAGAATGAGTCTCAAACAGATTTTTACATAATAGTC
TCAGGAGCATTGGATCTACTAGTAGATATCGATGGACGTGAACAAATCATTGGGAAGGCT
GTTGCTGGAGAATCATTTGGAGAAATAGGTGTTTTACTTGGAAGGCCACAACCATATGCT
GTTAGAACAACTGAAATTTCTCAAATTTTATGTCTGAGTAGGAAAACATTTCTGAACATT
CTTCGCGACAATCAAGAAGATGAACGGATTATAATGAGAAATCTTATTCAGAAACTGCAA
GGATTTGGAGGCTTTGATAATGTGGACGAGGAAAGCGATCCAAGTTTAGTCTTCAACAAC
TTTTCTCATGTTTCTAAGCAAGATACACCAACCAATCTTAGCGACCTGATTAGTATAAAT
ATCCAAACTTTAGAAGCTAGAACCAAGAAACAAGTAGAAAATGAAGGTGAAAGTTGTGGA
CGTAAACGCCAAACAGTTCTTGATCATTCTGTAGTTCCCAAGGGGTGTATTGAAATGACT
CAGAGTCCACCAGAAAGAAGGTGGAAAGAAGATCAACTCGACACAGAACGTGGAGGAAAC
AAAAGCATCCATGAGGTCCCCTGCTGTTCTTATTCAGGTAATAGAAGTCAAACTGGTGCA
AAGGGGGGGAAATCTATCAAAAAGAGAGTTACTATTCACATGAGAAACAACATCAATTCA
TTGCAGGAGCAGAATGGGAAGCTAATAATACTACCTGATACACTAGAAGAGCTATTCAGA
ATGGCAGGTCAAAGATTTGGGGAGTACAATCTCAAGAAAGTTGTAAATGCAGAAGATGTA
GAAATAGATGAGACAGATGTCATTAGAGATGGAGATCACTTGTTCTTTCTTTCAACTGAT
TGCTCATGTGTAGAAACTAGTACAATGTGA