Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400024894
CDS Infomation

pacid=37475816 polypeptide=PGSC0003DMP400016997 locus=PGSC0003DMG403009622 ID=PGSC0003DMT400024894.v4.03 annot-version=v4.03
Sequence

ATGTTATCATCCATTTACGTCGTCGTCGTAGCCTTTTTTTCATTTCTCATCGGTCTTCTC
TTCTACTTCATCCACTTCCGATGGACTCCATCGGCACTGGAAAAACTTCACCGGAAACTT
CCACCAGGTCCACGAGGTCTTCCGATAATCGGCAATCTCCACATATTAGGTTCCCTCCCT
CACCGTACCTTCTACAACCTCTCCAAAACCTACGGTCCATTAATGTTCCTAAAACTCGGC
AACATTCCAACTGTGATAATTTCATCGCCGGAGACCGCCGAGCTCATATTGAAAACTCAC
GACGCAATTTTCGCAAGCCGGCCAAAGCTGAAGGCGATAAATTACATGGTTGACGGTACT
AAGGGTTTAGCGTTTGCACCTTCCGGTCCACGGTGGCGCAATAATCGGAAGTTTTGTACT
CAAGAGCTGCTCACGGCGGAGAAAATCGGGTATTCTGCCGGGATGAGGAAGGAGGAAATT
GGGGTTTTGGTGGAGAAGGTGAAGGGATTTGGGGGTGAATTGGTGGTTGTGGATTTGGGG
GAGAGGATTGGGGATTTGATTGGGAATATGACTTATAGAATGTTATTTGGAGAAGGGAAT
AGTGAGAGATTTGATTTGAAGAATATTGTCAAGGAGATGGTGAGATTGAGTGGAACTTTT
AATGTTGCTGATTATGTGCCTTTTCTTGAGCCATTTGATATCCAGGGCTTGAATAAGCAG
TTGAAGGAAACAGGAAAGCGTGTTCAAGAAATATTTGATACCATAATCAATGAGCATGAA
CAAGATGCTAATAACTACACTCACAAGAGCAAGAACAAGGATCTTGTCGATATCATGTTG
TCATATCAAGATAATCCCAACTCATCTTACTCGATTGATCGTGCAACCATGAAAGCTATC
CTTTCTGACATGATTGTTGGAGCCATCGATACTTCACACACTTGGATAGAATGGGTGTTT
GCAGAAATCATCAAGCATCCAACAGTAATGAACAAACTCCAAGACGAGTTGACATCTATT
GTAGGACTTGATAGAATGGTTGAGGAAGATGATTTACCTAAGTTGGAATACTTGGAACTA
GTGCTCAAGGAAACGTTCAGGTTACATCCTGTAGCGCCTCTTTTAGTTCCTCGAGAATCA
ATAGAAGATGTTGTGATAAATGAATGTTACATACCAAAAGGATCACGGGTTATGATAAAT
TGTTGGGCGTTAGGACATGATCCTAAGATATGGTCGGATAACGTTGAGAAATTTATTCCT
GAGAGGTTTATTGGCAAGAACATCAATCTTCGTGGACATGATTTTCATTTACTACCATTT
GGATATGGGAGAAGAAGTTGTCCAGGAATAAATCTGGGGTTGATTACTGTCAAGTTGATA
GTTGCACAATTAGTACATTGCTTCAATTGGGATTTGCCTGATGGCATATTACCTGATGAT
TTGGACATGACTGAAAAGTTTGGTTTGGCAGCTCCAAGAGCTCAAAATTTGCTTGTTATT
CCTACTTACCGTCTACTCTGTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400016997
PEP Infomation

pacid=37475816 transcript=PGSC0003DMT400024894 locus=PGSC0003DMG403009622 ID=PGSC0003DMT400024894.v4.03 annot-version=v4.03
Sequence

MLSSIYVVVVAFFSFLIGLLFYFIHFRWTPSALEKLHRKLPPGPRGLPIIGNLHILGSLP
HRTFYNLSKTYGPLMFLKLGNIPTVIISSPETAELILKTHDAIFASRPKLKAINYMVDGT
KGLAFAPSGPRWRNNRKFCTQELLTAEKIGYSAGMRKEEIGVLVEKVKGFGGELVVVDLG
ERIGDLIGNMTYRMLFGEGNSERFDLKNIVKEMVRLSGTFNVADYVPFLEPFDIQGLNKQ
LKETGKRVQEIFDTIINEHEQDANNYTHKSKNKDLVDIMLSYQDNPNSSYSIDRATMKAI
LSDMIVGAIDTSHTWIEWVFAEIIKHPTVMNKLQDELTSIVGLDRMVEEDDLPKLEYLEL
VLKETFRLHPVAPLLVPRESIEDVVINECYIPKGSRVMINCWALGHDPKIWSDNVEKFIP
ERFIGKNINLRGHDFHLLPFGYGRRSCPGINLGLITVKLIVAQLVHCFNWDLPDGILPDD
LDMTEKFGLAAPRAQNLLVIPTYRLLC*

Transcript Sequence

Transcript ID

PGSC0003DMT400024894
Transcript Infomation

pacid=37475816 locus=PGSC0003DMG403009622 ID=PGSC0003DMT400024894.v4.03 annot-version=v4.03
Sequence

ATGTTATCATCCATTTACGTCGTCGTCGTAGCCTTTTTTTCATTTCTCATCGGTCTTCTC
TTCTACTTCATCCACTTCCGATGGACTCCATCGGCACTGGAAAAACTTCACCGGAAACTT
CCACCAGGTCCACGAGGTCTTCCGATAATCGGCAATCTCCACATATTAGGTTCCCTCCCT
CACCGTACCTTCTACAACCTCTCCAAAACCTACGGTCCATTAATGTTCCTAAAACTCGGC
AACATTCCAACTGTGATAATTTCATCGCCGGAGACCGCCGAGCTCATATTGAAAACTCAC
GACGCAATTTTCGCAAGCCGGCCAAAGCTGAAGGCGATAAATTACATGGTTGACGGTACT
AAGGGTTTAGCGTTTGCACCTTCCGGTCCACGGTGGCGCAATAATCGGAAGTTTTGTACT
CAAGAGCTGCTCACGGCGGAGAAAATCGGGTATTCTGCCGGGATGAGGAAGGAGGAAATT
GGGGTTTTGGTGGAGAAGGTGAAGGGATTTGGGGGTGAATTGGTGGTTGTGGATTTGGGG
GAGAGGATTGGGGATTTGATTGGGAATATGACTTATAGAATGTTATTTGGAGAAGGGAAT
AGTGAGAGATTTGATTTGAAGAATATTGTCAAGGAGATGGTGAGATTGAGTGGAACTTTT
AATGTTGCTGATTATGTGCCTTTTCTTGAGCCATTTGATATCCAGGGCTTGAATAAGCAG
TTGAAGGAAACAGGAAAGCGTGTTCAAGAAATATTTGATACCATAATCAATGAGCATGAA
CAAGATGCTAATAACTACACTCACAAGAGCAAGAACAAGGATCTTGTCGATATCATGTTG
TCATATCAAGATAATCCCAACTCATCTTACTCGATTGATCGTGCAACCATGAAAGCTATC
CTTTCTGACATGATTGTTGGAGCCATCGATACTTCACACACTTGGATAGAATGGGTGTTT
GCAGAAATCATCAAGCATCCAACAGTAATGAACAAACTCCAAGACGAGTTGACATCTATT
GTAGGACTTGATAGAATGGTTGAGGAAGATGATTTACCTAAGTTGGAATACTTGGAACTA
GTGCTCAAGGAAACGTTCAGGTTACATCCTGTAGCGCCTCTTTTAGTTCCTCGAGAATCA
ATAGAAGATGTTGTGATAAATGAATGTTACATACCAAAAGGATCACGGGTTATGATAAAT
TGTTGGGCGTTAGGACATGATCCTAAGATATGGTCGGATAACGTTGAGAAATTTATTCCT
GAGAGGTTTATTGGCAAGAACATCAATCTTCGTGGACATGATTTTCATTTACTACCATTT
GGATATGGGAGAAGAAGTTGTCCAGGAATAAATCTGGGGTTGATTACTGTCAAGTTGATA
GTTGCACAATTAGTACATTGCTTCAATTGGGATTTGCCTGATGGCATATTACCTGATGAT
TTGGACATGACTGAAAAGTTTGGTTTGGCAGCTCCAAGAGCTCAAAATTTGCTTGTTATT
CCTACTTACCGTCTACTCTGTTAA