Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400024865
CDS Infomation

pacid=37439723 polypeptide=PGSC0003DMP400016978 locus=PGSC0003DMG400009613 ID=PGSC0003DMT400024865.v4.03 annot-version=v4.03
Sequence

ATGAAGACCACACAGGATCTACAAAACACAACTGAGAAACAATCTTCAACTCAGGCTTCT
CATGAGGCCCAAAGTGACCAGCAGAACAATGCAACCGATATACCTGTAGCAGATTCAGGT
TCAGTTTCTGCATCAGGCAATGACAACCGAAAAGTTTCACGTGAAGATATTGAGCTAGTT
CAAAATTTGATTGAACGCTGCTTACAATTGTATATGAACAAGGATGAAGTGGTTAAAACA
CTTCTTAATCGTGCAAGGATAGATCCCGGATTTACAGCTCTTGTTTGGCAAAAATTGGAA
GAGGAAAATGCAGATTTCTTTCGGGCCTACTACATTAGGCTTAAACTGAAGAAACAAATC
ATCTTGTTCAATCATTTGCTTGAGCACCAATATCATCTGATGAAATATCCTGTGCCTCCG
AAGGTTCCATTGACTCCGATGCAGAATGGGATAAATACCATGCCAGTCAACAACTTACCC
ATGGGATACCCCGTCCTACAGCAACCTCCGCATCTGGCTGCAGGTCAACCTCATTTTGAT
CCGATGGGCATGTCCAGTTGCCATGTGGTTAATGGTGTGCCTGCACCAAGCAACTATCAT
CCAATGCAAATGAACTCTGGAAATGATATGGTGGTAGAAACGAGTGCATCCGATGTAGCA
CCAGCTGTTCCACCTAGCAATGCCATGTCTGATATGCCTGTAAGCCCTGCATCAGTAGCT
TCCAGTGGCCACTTCCCCTTCACCGCTTCGGAGATTTCTGGGATGGGAATTGACACATCA
GTGCTTGACTCTTCGTTCCCATCTGATGTAGCAAGTTCAGTAGGATTGCAACTTCCACCA
GATAATGGTGTTGGTAATTCTAGAGATTTGCTGAGATCCTTGGATCAGATTCCTTGGGAT
TTCAGTCTTTCGGATCTAACAGCAGACTTGTCAAACTTGGGAGATTTAGGATCTCTAGGA
AACTACCCTGGTTCCCCCTTTTTGCCTTCCGATTCAGATATTCTGCTTGATTCTCCAGAA
CAAGAAGATATAGTTGAGGAGTTCTTCGTTGATGTTGAAGCTGCCCCAGGGCCTGCAGCA
TGTCCTCAATCAGATGAAGAGAAGTCCTAG

Peptide Sequence

PEP ID

PGSC0003DMP400016978
PEP Infomation

pacid=37439723 transcript=PGSC0003DMT400024865 locus=PGSC0003DMG400009613 ID=PGSC0003DMT400024865.v4.03 annot-version=v4.03
Sequence

MKTTQDLQNTTEKQSSTQASHEAQSDQQNNATDIPVADSGSVSASGNDNRKVSREDIELV
QNLIERCLQLYMNKDEVVKTLLNRARIDPGFTALVWQKLEEENADFFRAYYIRLKLKKQI
ILFNHLLEHQYHLMKYPVPPKVPLTPMQNGINTMPVNNLPMGYPVLQQPPHLAAGQPHFD
PMGMSSCHVVNGVPAPSNYHPMQMNSGNDMVVETSASDVAPAVPPSNAMSDMPVSPASVA
SSGHFPFTASEISGMGIDTSVLDSSFPSDVASSVGLQLPPDNGVGNSRDLLRSLDQIPWD
FSLSDLTADLSNLGDLGSLGNYPGSPFLPSDSDILLDSPEQEDIVEEFFVDVEAAPGPAA
CPQSDEEKS*

Transcript Sequence

Transcript ID

PGSC0003DMT400024865
Transcript Infomation

pacid=37439723 locus=PGSC0003DMG400009613 ID=PGSC0003DMT400024865.v4.03 annot-version=v4.03
Sequence

ATGAAGACCACACAGGATCTACAAAACACAACTGAGAAACAATCTTCAACTCAGGCTTCT
CATGAGGCCCAAAGTGACCAGCAGAACAATGCAACCGATATACCTGTAGCAGATTCAGGT
TCAGTTTCTGCATCAGGCAATGACAACCGAAAAGTTTCACGTGAAGATATTGAGCTAGTT
CAAAATTTGATTGAACGCTGCTTACAATTGTATATGAACAAGGATGAAGTGGTTAAAACA
CTTCTTAATCGTGCAAGGATAGATCCCGGATTTACAGCTCTTGTTTGGCAAAAATTGGAA
GAGGAAAATGCAGATTTCTTTCGGGCCTACTACATTAGGCTTAAACTGAAGAAACAAATC
ATCTTGTTCAATCATTTGCTTGAGCACCAATATCATCTGATGAAATATCCTGTGCCTCCG
AAGGTTCCATTGACTCCGATGCAGAATGGGATAAATACCATGCCAGTCAACAACTTACCC
ATGGGATACCCCGTCCTACAGCAACCTCCGCATCTGGCTGCAGGTCAACCTCATTTTGAT
CCGATGGGCATGTCCAGTTGCCATGTGGTTAATGGTGTGCCTGCACCAAGCAACTATCAT
CCAATGCAAATGAACTCTGGAAATGATATGGTGGTAGAAACGAGTGCATCCGATGTAGCA
CCAGCTGTTCCACCTAGCAATGCCATGTCTGATATGCCTGTAAGCCCTGCATCAGTAGCT
TCCAGTGGCCACTTCCCCTTCACCGCTTCGGAGATTTCTGGGATGGGAATTGACACATCA
GTGCTTGACTCTTCGTTCCCATCTGATGTAGCAAGTTCAGTAGGATTGCAACTTCCACCA
GATAATGGTGTTGGTAATTCTAGAGATTTGCTGAGATCCTTGGATCAGATTCCTTGGGAT
TTCAGTCTTTCGGATCTAACAGCAGACTTGTCAAACTTGGGAGATTTAGGATCTCTAGGA
AACTACCCTGGTTCCCCCTTTTTGCCTTCCGATTCAGATATTCTGCTTGATTCTCCAGAA
CAAGAAGATATAGTTGAGGAGTTCTTCGTTGATGTTGAAGCTGCCCCAGGGCCTGCAGCA
TGTCCTCAATCAGATGAAGAGAAGTCCTAG