Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400024833
CDS Infomation

pacid=37470146 polypeptide=PGSC0003DMP400016960 locus=PGSC0003DMG400009599 ID=PGSC0003DMT400024833.v4.03 annot-version=v4.03
Sequence

ATGGCACAAATTTTGCTACATGGTACACTTCATGTTACTATATTTGAAGTTGATAAGCTT
CGTACTAATTTTGGAAGAGACATTTTCAATAAGGTTGTTCAAGGCATTGAAGGAGCTATT
GGCTTCAATAAGACAGCATCAACACTCTATGCAACCATTGATCTTGGAAAAGCCAGAGTT
GGCAGAACCAGATTGCTCGATGAACACAAAAATCCACGGTGGTACGAGTCATTCCACATT
TACTGTGCTCATATGGCTTCTGATGTCATATTCACTGTCAAAGCTGATAATCCAATTGGA
GCAGAACTCATAGGAAGAGCTTACTTACCAGTTGAACGATTGATAGATGGAGAAGTTGTT
GATGAATGGCTTGAAATCCTGGATACAGAACGAAAACCTGTGCAAGGACACTCTAAAATT
CATGTGAAGTTGCAGTATTTTGATGTCACAAGGGAGTATAATTGGAATAGAGGGATAAGA
GTTACAAGATTTCCTGGAGTTCCTTACACATTCTTTAGTCAAAGACAAGGATGTAAGGTC
ACCCTTTACCAAGATTCTCATGTTCCTGATAACTTTGTCCCGAAAATTCCTCTGGCTGGT
GGCAAGTTTTATGAGCCACAAAGATGTTGGGAAGACATTTTTGATGCAATCACTAATGCA
AAGCATATGATTTACATAACTGGATGGTCTGTTTATACGGAGATTACTTTGATAAGGGAT
ACGAGGAGGCCTAAGCCTGGTGGAGACATAACGCTCGGGGAGTTGCTTAAGAAGAAAGCT
AATGAAGGTGTGAGAGTTCTAATGCTGGTGTGGGATGACAGAACATCGGTTCCTGTGTTG
AAACAAGATGGGCTAATGGCTACTCATGATCAAGAAACTGCTACTTATTTTGACGACTCT
GAAGTACATTGTGTGTTGTGTCCTCGAAATCCTGATGATGGAAGAAGCATTATTCAAAAC
ATACAGATTGGGACAATGTTTACTCATCATCAAAAGATTGTAGTTGTTGATGGAGAATTG
CCTAATGGAGACACGGAGAGACGGAGAATTGTGAGTTATATTGGTGGGATTGATCTTTGT
GATGGTAGATATGATACACAATTTCACCCCCTTTTCAGGACTTTGGACACAGCACATCAT
GATGATTTTCACCAACCAAATTTCACTGGTGCTACGATTCAGAAAGGGGGACCAAGAGAG
CCTTGGCACGATATCCATTGCCGAATAGAAGGGCCAGCAGCTTGGGATGTGCTCTTCAAT
TTTGAACAGAGGTGGAGGAAGCAAGGTGGAAAGGACTTGCTTATGAACCTAAGGGATATC
GAGAATATAATCATACCACCTTCACCTGCTATGTATCCAGATGATCATGACACGTGGAAT
GTTCAAGTTTTTCGATCAATTGATGGGGGAGCAGCTTTTGGCTTCCCCGATGCTCCTGAG
GAGGCAGCCAAGTCTGGTCTTATAAGTGGAAAGGACAACATCATTGATCGAAGCATACAA
GATGGATATATTAATGCCATTCGTCGAGCAAATCATTTTATTTACATCGAAAACCAGTAC
TTCTTAGGAAGCTCCTTTTCATGGAACTCCGATGATATCAAGGATGAAGACATTAATGCT
CTACATTTGATCCCAAAGGAGTTGTCTTTGAAGATAATTAGCAAGATTGAAGCAGGGGAA
AGGTTTACGGTCTATGTTGTGGTTCCAATGTGGCCAGAAGGTCTTCCTGAGAGTGCATCT
GTACAAGCAATACTGGATTGGCAAAGGAGAACCATGAAAATGATGTACACCGATATAATT
CAAGCTCTTAAAGCAAAAGGTATTGTGGCAAATCCTAAGGACTACTTGAGTTTCTTTTGC
CTTGGCAATAGGGAAACAAAGAAGACAGGAGAATATGAGCCTTCTGAATCACCAGAACCC
GACTCAGACTATCAAAAAGCTCAAGAAGCCAGACGTTTCATGATTTACGTTCATGCCAAA
ATGATGATAGGCAAGTTAAATGCGCTAGAAATCATTGCATATGTGATTATATATTTTCAA
AATTAA

Peptide Sequence

PEP ID

PGSC0003DMP400016960
PEP Infomation

pacid=37470146 transcript=PGSC0003DMT400024833 locus=PGSC0003DMG400009599 ID=PGSC0003DMT400024833.v4.03 annot-version=v4.03
Sequence

MAQILLHGTLHVTIFEVDKLRTNFGRDIFNKVVQGIEGAIGFNKTASTLYATIDLGKARV
GRTRLLDEHKNPRWYESFHIYCAHMASDVIFTVKADNPIGAELIGRAYLPVERLIDGEVV
DEWLEILDTERKPVQGHSKIHVKLQYFDVTREYNWNRGIRVTRFPGVPYTFFSQRQGCKV
TLYQDSHVPDNFVPKIPLAGGKFYEPQRCWEDIFDAITNAKHMIYITGWSVYTEITLIRD
TRRPKPGGDITLGELLKKKANEGVRVLMLVWDDRTSVPVLKQDGLMATHDQETATYFDDS
EVHCVLCPRNPDDGRSIIQNIQIGTMFTHHQKIVVVDGELPNGDTERRRIVSYIGGIDLC
DGRYDTQFHPLFRTLDTAHHDDFHQPNFTGATIQKGGPREPWHDIHCRIEGPAAWDVLFN
FEQRWRKQGGKDLLMNLRDIENIIIPPSPAMYPDDHDTWNVQVFRSIDGGAAFGFPDAPE
EAAKSGLISGKDNIIDRSIQDGYINAIRRANHFIYIENQYFLGSSFSWNSDDIKDEDINA
LHLIPKELSLKIISKIEAGERFTVYVVVPMWPEGLPESASVQAILDWQRRTMKMMYTDII
QALKAKGIVANPKDYLSFFCLGNRETKKTGEYEPSESPEPDSDYQKAQEARRFMIYVHAK
MMIGKLNALEIIAYVIIYFQN*

Transcript Sequence

Transcript ID

PGSC0003DMT400024833
Transcript Infomation

pacid=37470146 locus=PGSC0003DMG400009599 ID=PGSC0003DMT400024833.v4.03 annot-version=v4.03
Sequence

ATGGCACAAATTTTGCTACATGGTACACTTCATGTTACTATATTTGAAGTTGATAAGCTT
CGTACTAATTTTGGAAGAGACATTTTCAATAAGGTTGTTCAAGGCATTGAAGGAGCTATT
GGCTTCAATAAGACAGCATCAACACTCTATGCAACCATTGATCTTGGAAAAGCCAGAGTT
GGCAGAACCAGATTGCTCGATGAACACAAAAATCCACGGTGGTACGAGTCATTCCACATT
TACTGTGCTCATATGGCTTCTGATGTCATATTCACTGTCAAAGCTGATAATCCAATTGGA
GCAGAACTCATAGGAAGAGCTTACTTACCAGTTGAACGATTGATAGATGGAGAAGTTGTT
GATGAATGGCTTGAAATCCTGGATACAGAACGAAAACCTGTGCAAGGACACTCTAAAATT
CATGTGAAGTTGCAGTATTTTGATGTCACAAGGGAGTATAATTGGAATAGAGGGATAAGA
GTTACAAGATTTCCTGGAGTTCCTTACACATTCTTTAGTCAAAGACAAGGATGTAAGGTC
ACCCTTTACCAAGATTCTCATGTTCCTGATAACTTTGTCCCGAAAATTCCTCTGGCTGGT
GGCAAGTTTTATGAGCCACAAAGATGTTGGGAAGACATTTTTGATGCAATCACTAATGCA
AAGCATATGATTTACATAACTGGATGGTCTGTTTATACGGAGATTACTTTGATAAGGGAT
ACGAGGAGGCCTAAGCCTGGTGGAGACATAACGCTCGGGGAGTTGCTTAAGAAGAAAGCT
AATGAAGGTGTGAGAGTTCTAATGCTGGTGTGGGATGACAGAACATCGGTTCCTGTGTTG
AAACAAGATGGGCTAATGGCTACTCATGATCAAGAAACTGCTACTTATTTTGACGACTCT
GAAGTACATTGTGTGTTGTGTCCTCGAAATCCTGATGATGGAAGAAGCATTATTCAAAAC
ATACAGATTGGGACAATGTTTACTCATCATCAAAAGATTGTAGTTGTTGATGGAGAATTG
CCTAATGGAGACACGGAGAGACGGAGAATTGTGAGTTATATTGGTGGGATTGATCTTTGT
GATGGTAGATATGATACACAATTTCACCCCCTTTTCAGGACTTTGGACACAGCACATCAT
GATGATTTTCACCAACCAAATTTCACTGGTGCTACGATTCAGAAAGGGGGACCAAGAGAG
CCTTGGCACGATATCCATTGCCGAATAGAAGGGCCAGCAGCTTGGGATGTGCTCTTCAAT
TTTGAACAGAGGTGGAGGAAGCAAGGTGGAAAGGACTTGCTTATGAACCTAAGGGATATC
GAGAATATAATCATACCACCTTCACCTGCTATGTATCCAGATGATCATGACACGTGGAAT
GTTCAAGTTTTTCGATCAATTGATGGGGGAGCAGCTTTTGGCTTCCCCGATGCTCCTGAG
GAGGCAGCCAAGTCTGGTCTTATAAGTGGAAAGGACAACATCATTGATCGAAGCATACAA
GATGGATATATTAATGCCATTCGTCGAGCAAATCATTTTATTTACATCGAAAACCAGTAC
TTCTTAGGAAGCTCCTTTTCATGGAACTCCGATGATATCAAGGATGAAGACATTAATGCT
CTACATTTGATCCCAAAGGAGTTGTCTTTGAAGATAATTAGCAAGATTGAAGCAGGGGAA
AGGTTTACGGTCTATGTTGTGGTTCCAATGTGGCCAGAAGGTCTTCCTGAGAGTGCATCT
GTACAAGCAATACTGGATTGGCAAAGGAGAACCATGAAAATGATGTACACCGATATAATT
CAAGCTCTTAAAGCAAAAGGTATTGTGGCAAATCCTAAGGACTACTTGAGTTTCTTTTGC
CTTGGCAATAGGGAAACAAAGAAGACAGGAGAATATGAGCCTTCTGAATCACCAGAACCC
GACTCAGACTATCAAAAAGCTCAAGAAGCCAGACGTTTCATGATTTACGTTCATGCCAAA
ATGATGATAGGCAAGTTAAATGCGCTAGAAATCATTGCATATGTGATTATATATTTTCAA
AATTAA