Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400024794
CDS Infomation

pacid=37464597 polypeptide=PGSC0003DMP400016942 locus=PGSC0003DMG400009584 ID=PGSC0003DMT400024794.v4.03 annot-version=v4.03
Sequence

ATGGACTGGATACAATCATGGAAAGACACACTCTTTTTACTCCTGGATGATGTCCCGGTC
AGTCTCCGCGAAGTTGTTGCGTCCATTGCCATCGATGGGACCTCTGCAACAACTATCATC
ATCGATAGTAGGAGCGAAGAGCCATTGTCTAGAGCATTCCTGTATAATGAGAGCTGTCCT
GATGCCTTGCCTTTGGTGAAGTCTATTGCTCCTGCAAAACATACAGTCTGCTCTGGATCC
TCTACACTTTGCAAGCTTGTCTCATGGTGGAACTCTTATCCTTCAAGCAAGGAATCTGCG
GTATTGCTACATCAAGCTGATTGGTTACTGTGGCTACTCCATGGAAAGCTGGGCGTGTCT
GACTACAATAATGCTCTGAAGGTTGGCTATGATCCGGAAATGGATTCCTATCCGCCTTGG
CTTCTATCTCAGCCATATTCTCATCTTTTACCTTCTGTACAAGATCCTGGTACTAAAATT
GGGTATATGAAGGAGGACATAAGAACTCAGTTTGGTTATCCAAAGGATTGTCTTATTTGT
ACAGGAACCACAGACAGTATAGCAGCATTTCTAGCAGCACGCGCTACTCAACCTGGAAAA
GCCGTAACATCTTTGGGTTCAACACTTGCTATCAAACTACTAAGCTCCAGAAGAGTAGAA
GATGCTCGATTTGGAGTATATAGCCACCGTCTTGACGATAAATGGCTTGTAGGAGGTGCT
TCAAACACAGGGGGAGCAGTTCTTAGGCATCTCTTCACTGATGAGCAGTTGGAGAAACTA
AGTGAACAGATAAATCCCTTTGAGACTTCCCCTCTTGATTATTATCCCCTTCAAGCAGTT
GGTGAAAGATTCCCTGTGGCAGATCCAAAGATGGAGCCAAGGTTACATCCACGTCCAGAA
AGTGATGTTGAATATTTGCATGGTATTCTTGAATCAATTGCTCGCATTGAGGCAAAGGGA
TACAAGTTACTGAAGGATCTAGGGGCCACCCCTGTTGAAGAAGTGATCACTTCTGGAGGA
GGTTCTAAAAACCAAAAATGGATAAAGATACGGGAGAGGGTACTCGGTTTGCCTGTGTGC
AAGGCAGACCAGACTGAAGCTGCCTATGGAGCTGCATTATTGGCAATGAAGGGTGCTTGT
GAAAATGCAACATCTGATTAG

Peptide Sequence

PEP ID

PGSC0003DMP400016942
PEP Infomation

pacid=37464597 transcript=PGSC0003DMT400024794 locus=PGSC0003DMG400009584 ID=PGSC0003DMT400024794.v4.03 annot-version=v4.03
Sequence

MDWIQSWKDTLFLLLDDVPVSLREVVASIAIDGTSATTIIIDSRSEEPLSRAFLYNESCP
DALPLVKSIAPAKHTVCSGSSTLCKLVSWWNSYPSSKESAVLLHQADWLLWLLHGKLGVS
DYNNALKVGYDPEMDSYPPWLLSQPYSHLLPSVQDPGTKIGYMKEDIRTQFGYPKDCLIC
TGTTDSIAAFLAARATQPGKAVTSLGSTLAIKLLSSRRVEDARFGVYSHRLDDKWLVGGA
SNTGGAVLRHLFTDEQLEKLSEQINPFETSPLDYYPLQAVGERFPVADPKMEPRLHPRPE
SDVEYLHGILESIARIEAKGYKLLKDLGATPVEEVITSGGGSKNQKWIKIRERVLGLPVC
KADQTEAAYGAALLAMKGACENATSD*

Transcript Sequence

Transcript ID

PGSC0003DMT400024794
Transcript Infomation

pacid=37464597 locus=PGSC0003DMG400009584 ID=PGSC0003DMT400024794.v4.03 annot-version=v4.03
Sequence

ATGGACTGGATACAATCATGGAAAGACACACTCTTTTTACTCCTGGATGATGTCCCGGTC
AGTCTCCGCGAAGTTGTTGCGTCCATTGCCATCGATGGGACCTCTGCAACAACTATCATC
ATCGATAGTAGGAGCGAAGAGCCATTGTCTAGAGCATTCCTGTATAATGAGAGCTGTCCT
GATGCCTTGCCTTTGGTGAAGTCTATTGCTCCTGCAAAACATACAGTCTGCTCTGGATCC
TCTACACTTTGCAAGCTTGTCTCATGGTGGAACTCTTATCCTTCAAGCAAGGAATCTGCG
GTATTGCTACATCAAGCTGATTGGTTACTGTGGCTACTCCATGGAAAGCTGGGCGTGTCT
GACTACAATAATGCTCTGAAGGTTGGCTATGATCCGGAAATGGATTCCTATCCGCCTTGG
CTTCTATCTCAGCCATATTCTCATCTTTTACCTTCTGTACAAGATCCTGGTACTAAAATT
GGGTATATGAAGGAGGACATAAGAACTCAGTTTGGTTATCCAAAGGATTGTCTTATTTGT
ACAGGAACCACAGACAGTATAGCAGCATTTCTAGCAGCACGCGCTACTCAACCTGGAAAA
GCCGTAACATCTTTGGGTTCAACACTTGCTATCAAACTACTAAGCTCCAGAAGAGTAGAA
GATGCTCGATTTGGAGTATATAGCCACCGTCTTGACGATAAATGGCTTGTAGGAGGTGCT
TCAAACACAGGGGGAGCAGTTCTTAGGCATCTCTTCACTGATGAGCAGTTGGAGAAACTA
AGTGAACAGATAAATCCCTTTGAGACTTCCCCTCTTGATTATTATCCCCTTCAAGCAGTT
GGTGAAAGATTCCCTGTGGCAGATCCAAAGATGGAGCCAAGGTTACATCCACGTCCAGAA
AGTGATGTTGAATATTTGCATGGTATTCTTGAATCAATTGCTCGCATTGAGGCAAAGGGA
TACAAGTTACTGAAGGATCTAGGGGCCACCCCTGTTGAAGAAGTGATCACTTCTGGAGGA
GGTTCTAAAAACCAAAAATGGATAAAGATACGGGAGAGGGTACTCGGTTTGCCTGTGTGC
AAGGCAGACCAGACTGAAGCTGCCTATGGAGCTGCATTATTGGCAATGAAGGGTGCTTGT
GAAAATGCAACATCTGATTAG