Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400024781
CDS Infomation

pacid=37465766 polypeptide=PGSC0003DMP400016934 locus=PGSC0003DMG400009579 ID=PGSC0003DMT400024781.v4.03 annot-version=v4.03
Sequence

ATGGATTGTCCAATTGATACTGCTGCTCCTATTGCCCAAACAGGAAGGCCCTGCACAAAT
GTTGAAGTGAAAGAAGAAGAATTGACTGGTTCAGTGCTGATAAGTCAGGAGTGCCTGGAC
GAGCAGGACATTGTGAGTGATGATGTTACGACTCATCAAGGACTAAACGAAACAGAGTCA
CCTGCTGTGGAACTTGTAAATTTGAATGACAAGGTTCAGGAGAACACTAAGGAGCGGAAG
GATGTTCTGAACTGTGATGCTACTGATCTTCAAGATCTGAAAGGAGAAGAGTCACCTGCT
GTGGCTTTAGTGAAGTCAAATGACAAGGTTCAGGAGTACGCAGAGGAGCAGAAGGATGCT
ACTGATCATCAAGTATTAGCAGGAAAAGACTCACCTGCTGTGGGACTAGGGAATTTGAAT
GACAAGGTTCAGCTATTCATGGAGCAGCAAAAGGATGATCTGAGTAGTGATGCTACTGAT
GATCAAATCCTCAATGATAAAGAGTCACCTGCTGTGGGGCTAGCAATTTCAAATGACAAG
GTTGATGATCAGAAAGATGCTTCTGTATTTTGCACTTCAGCTTCTGAAAACCATACTGAA
AATTCATCAAGAGAGACGGTGACTGCAGAGGATGAGAAATGGAAATCATCAGAAGGTTCA
GTATCCAACAACAATGGAAAAGTTGGTGTTAGCACAGCTGAGTTTGTGTCAGTAAGTTCC
AAGGCTTCTCAACTTCCACTAGTTGATGCAATTATTGGAGTCAACAAAGCTGTAGCGCAG
GAGTCAGAAAAGCCTTCTATAAAAGAACTAAAGCAAAATGTTACTGGGGTGAGAAAACCA
GAAGCTGGATCTGCAAGAAATCTCTCATCATCCTCTGGTTCATCCGTCACTCGTACACCA
CCACCTGCTCGACCGGCTGGCCTTGGTCGTGCTGCCCCACTATTGGAACCTTCTCCCCGA
GTGGTTCAGCAGCCTCGAGTGAATGGATCCGCGTCTTCAGTACAAAACCAACTTGTTGAA
GAACCCACAAATGGAGAATCTGAGGAATATGATGAGACACGTGAGGAACTCCAGATGATA
AGAGTTAAGTTTTTGCGTCTTGCTCATAGGCTTGGGCAGAATCCACATAATGTAGTAGTT
GCCCAGGTCCTTTATAGATTAGGGTTGGCTGAACAGCTGAGGGGAAGAAATGGAAGTCGT
GTTGCTGCTTTTAGCTTTGATCGTGCAAGTGCCATGGCCGAGCAACTTGAGGCAGCTGGA
CAAGAAGCCTTGGACTTCTCGTGCACAATTATGGTTCTTGGAAAAACAGGTGTTGGTAAA
AGTGCGACCATAAATTCTATATTTGGTGAAGCTAAATTTGGTACTGATGCATTTCAGATA
GGAACAAAGAAGGTTCAGGATGTTATTGGGACTGTGCAGGGAATTAAGGTTCGGGTAATT
GACACTCCTGGGCTTCTGCCTTCCTGGGCAGACCAGCGACGGAATGAGAAAATCCTTCAT
TCTGTTAAAAGATTTATTAAGAAAATGTCACCAGATATTGTACTGTATCTCGATAGGTTG
GATATGCAAAGTAGAGATTATGGTGACATGCCATTGTTGCGGACAATTACTGAAGTTTTT
GGCCCATCAATATGGTTCAATGCAATAGTTGTTCTTACACATGCTGCATCTGCTCCTCCT
GAAGGCCCCAATGGTACTACAACAAGTTATGACATGTTTGTAACTCAGCGGTCTCATGTT
GTTCAGCAAGCAATACGGCAGGCAGCCGGAGATATGCGCCTTATGAATCCTGTTTCTCTG
GTCGAGAATCACTCAGCATGCAGGACAAACAGGGTTGGGCTGAGAGTGTTACCTAATGGT
CAAGTTTGGAAGCCTCACTTGTTGCTTCTGTCATTTGCATCCAAAATTTTGGCTGAGGCA
AACACATTGCTGAAGTTACAAGACAGTCCACCAGGTCAGACTTATGCCACTCGATCAAGA
TCACCTCCTTTACCTTTCCTGCTTTCATCCCTTCTCCAGTCAAGACCACAGGTTAAGCTA
CCAGCAGACCAATTTAGTGATGACAATGAGACCTTAGATGATGATCTGGATGAATCTTCG
GATTCTGAAGATGAATCAGAATATGATCAACTGCCAGCTTTCAAACGGTTGACCAAAGCC
CAGCTAGCAAAGTTGACCCAAGAGCAAAAGAAGGCATACAATGATGAATTAGAATACAGG
GAAAAGCTTTTTATGAAAAAGCAATTGAAGGAGGAGAGAAAGAGACGAAGAATGATGAAG
AAAATGCAGGCTGCAGCTAAGGATTTGCCTATCAATACCAACGAAACAGTAGAAGAGGAG
ACAGGCAGTGCAGCGTCTGTTCCAGTACCAATGCCAGATTTGGCCTTACCTGCTTCTTTT
GATTCTGATAACCCAACTCATAGATACCGTTATCTTGATTCTTCAAATCAGTGGCTTGTG
AGGCCTGTTCTAGAGCCTAATGGTTGGGACCACGATGTTGGTTATGAGGGCATTAATGTA
GAAAGGTTGTTTGTTATCAAAGACAAGATACCTCTGTCTTTCTCCAGTCAGCTTTCTAAG
GACAAAAAGGACGCCAATCTTCAAATGGAAATCGCAAGTTCGGTGAAGCATGGGAATGGG
AAAGTAACTTCTTTAGGTTTTGATATGCAGTCGGTTGGTAAAGACCTTGCTTACACTCTA
CGCAGTGAGACTAGATTCAGCAATTACAGAAAAAATAAGGCAACAGCTGGTCTCTCAGTA
ACTCTCTTAGGTGATGTTATGACAGGTGGAGTGAAAGTTGAGGACAAATTGATTGTTAAC
AAACGAGGACTGCTGGTCATATCTGGGGGTGCTATGTTTGGTCGTGGTGATGTTGCTTAT
GGGGGTAGCTTGGAAGCAACATTAAGAGACAAAGATCATCCTCTTGGTCGTTTCCTATCA
ACGTTGGGGCTCTCGGTCATGGACTGGCATGGAGATCTTGCTATTGGATGCAATTCACAA
ACCCAAATACCTGTTGGACGATACACAAACTTGATTGGACGTGTCAACATTAACAATAAA
GGGTCTGGGCAAGTCAGTATTCTCCTGAACAGCTCAGAACAACTTCAGATTGCTTTGATT
AGCTTGCTTCCTCTGGTCAGAAAACTGATTAGCTACACTCAATCAGTGCAATTTGGATAA

Peptide Sequence

PEP ID

PGSC0003DMP400016934
PEP Infomation

pacid=37465766 transcript=PGSC0003DMT400024781 locus=PGSC0003DMG400009579 ID=PGSC0003DMT400024781.v4.03 annot-version=v4.03
Sequence

MDCPIDTAAPIAQTGRPCTNVEVKEEELTGSVLISQECLDEQDIVSDDVTTHQGLNETES
PAVELVNLNDKVQENTKERKDVLNCDATDLQDLKGEESPAVALVKSNDKVQEYAEEQKDA
TDHQVLAGKDSPAVGLGNLNDKVQLFMEQQKDDLSSDATDDQILNDKESPAVGLAISNDK
VDDQKDASVFCTSASENHTENSSRETVTAEDEKWKSSEGSVSNNNGKVGVSTAEFVSVSS
KASQLPLVDAIIGVNKAVAQESEKPSIKELKQNVTGVRKPEAGSARNLSSSSGSSVTRTP
PPARPAGLGRAAPLLEPSPRVVQQPRVNGSASSVQNQLVEEPTNGESEEYDETREELQMI
RVKFLRLAHRLGQNPHNVVVAQVLYRLGLAEQLRGRNGSRVAAFSFDRASAMAEQLEAAG
QEALDFSCTIMVLGKTGVGKSATINSIFGEAKFGTDAFQIGTKKVQDVIGTVQGIKVRVI
DTPGLLPSWADQRRNEKILHSVKRFIKKMSPDIVLYLDRLDMQSRDYGDMPLLRTITEVF
GPSIWFNAIVVLTHAASAPPEGPNGTTTSYDMFVTQRSHVVQQAIRQAAGDMRLMNPVSL
VENHSACRTNRVGLRVLPNGQVWKPHLLLLSFASKILAEANTLLKLQDSPPGQTYATRSR
SPPLPFLLSSLLQSRPQVKLPADQFSDDNETLDDDLDESSDSEDESEYDQLPAFKRLTKA
QLAKLTQEQKKAYNDELEYREKLFMKKQLKEERKRRRMMKKMQAAAKDLPINTNETVEEE
TGSAASVPVPMPDLALPASFDSDNPTHRYRYLDSSNQWLVRPVLEPNGWDHDVGYEGINV
ERLFVIKDKIPLSFSSQLSKDKKDANLQMEIASSVKHGNGKVTSLGFDMQSVGKDLAYTL
RSETRFSNYRKNKATAGLSVTLLGDVMTGGVKVEDKLIVNKRGLLVISGGAMFGRGDVAY
GGSLEATLRDKDHPLGRFLSTLGLSVMDWHGDLAIGCNSQTQIPVGRYTNLIGRVNINNK
GSGQVSILLNSSEQLQIALISLLPLVRKLISYTQSVQFG*

Transcript Sequence

Transcript ID

PGSC0003DMT400024781
Transcript Infomation

pacid=37465766 locus=PGSC0003DMG400009579 ID=PGSC0003DMT400024781.v4.03 annot-version=v4.03
Sequence

ATGGATTGTCCAATTGATACTGCTGCTCCTATTGCCCAAACAGGAAGGCCCTGCACAAAT
GTTGAAGTGAAAGAAGAAGAATTGACTGGTTCAGTGCTGATAAGTCAGGAGTGCCTGGAC
GAGCAGGACATTGTGAGTGATGATGTTACGACTCATCAAGGACTAAACGAAACAGAGTCA
CCTGCTGTGGAACTTGTAAATTTGAATGACAAGGTTCAGGAGAACACTAAGGAGCGGAAG
GATGTTCTGAACTGTGATGCTACTGATCTTCAAGATCTGAAAGGAGAAGAGTCACCTGCT
GTGGCTTTAGTGAAGTCAAATGACAAGGTTCAGGAGTACGCAGAGGAGCAGAAGGATGCT
ACTGATCATCAAGTATTAGCAGGAAAAGACTCACCTGCTGTGGGACTAGGGAATTTGAAT
GACAAGGTTCAGCTATTCATGGAGCAGCAAAAGGATGATCTGAGTAGTGATGCTACTGAT
GATCAAATCCTCAATGATAAAGAGTCACCTGCTGTGGGGCTAGCAATTTCAAATGACAAG
GTTGATGATCAGAAAGATGCTTCTGTATTTTGCACTTCAGCTTCTGAAAACCATACTGAA
AATTCATCAAGAGAGACGGTGACTGCAGAGGATGAGAAATGGAAATCATCAGAAGGTTCA
GTATCCAACAACAATGGAAAAGTTGGTGTTAGCACAGCTGAGTTTGTGTCAGTAAGTTCC
AAGGCTTCTCAACTTCCACTAGTTGATGCAATTATTGGAGTCAACAAAGCTGTAGCGCAG
GAGTCAGAAAAGCCTTCTATAAAAGAACTAAAGCAAAATGTTACTGGGGTGAGAAAACCA
GAAGCTGGATCTGCAAGAAATCTCTCATCATCCTCTGGTTCATCCGTCACTCGTACACCA
CCACCTGCTCGACCGGCTGGCCTTGGTCGTGCTGCCCCACTATTGGAACCTTCTCCCCGA
GTGGTTCAGCAGCCTCGAGTGAATGGATCCGCGTCTTCAGTACAAAACCAACTTGTTGAA
GAACCCACAAATGGAGAATCTGAGGAATATGATGAGACACGTGAGGAACTCCAGATGATA
AGAGTTAAGTTTTTGCGTCTTGCTCATAGGCTTGGGCAGAATCCACATAATGTAGTAGTT
GCCCAGGTCCTTTATAGATTAGGGTTGGCTGAACAGCTGAGGGGAAGAAATGGAAGTCGT
GTTGCTGCTTTTAGCTTTGATCGTGCAAGTGCCATGGCCGAGCAACTTGAGGCAGCTGGA
CAAGAAGCCTTGGACTTCTCGTGCACAATTATGGTTCTTGGAAAAACAGGTGTTGGTAAA
AGTGCGACCATAAATTCTATATTTGGTGAAGCTAAATTTGGTACTGATGCATTTCAGATA
GGAACAAAGAAGGTTCAGGATGTTATTGGGACTGTGCAGGGAATTAAGGTTCGGGTAATT
GACACTCCTGGGCTTCTGCCTTCCTGGGCAGACCAGCGACGGAATGAGAAAATCCTTCAT
TCTGTTAAAAGATTTATTAAGAAAATGTCACCAGATATTGTACTGTATCTCGATAGGTTG
GATATGCAAAGTAGAGATTATGGTGACATGCCATTGTTGCGGACAATTACTGAAGTTTTT
GGCCCATCAATATGGTTCAATGCAATAGTTGTTCTTACACATGCTGCATCTGCTCCTCCT
GAAGGCCCCAATGGTACTACAACAAGTTATGACATGTTTGTAACTCAGCGGTCTCATGTT
GTTCAGCAAGCAATACGGCAGGCAGCCGGAGATATGCGCCTTATGAATCCTGTTTCTCTG
GTCGAGAATCACTCAGCATGCAGGACAAACAGGGTTGGGCTGAGAGTGTTACCTAATGGT
CAAGTTTGGAAGCCTCACTTGTTGCTTCTGTCATTTGCATCCAAAATTTTGGCTGAGGCA
AACACATTGCTGAAGTTACAAGACAGTCCACCAGGTCAGACTTATGCCACTCGATCAAGA
TCACCTCCTTTACCTTTCCTGCTTTCATCCCTTCTCCAGTCAAGACCACAGGTTAAGCTA
CCAGCAGACCAATTTAGTGATGACAATGAGACCTTAGATGATGATCTGGATGAATCTTCG
GATTCTGAAGATGAATCAGAATATGATCAACTGCCAGCTTTCAAACGGTTGACCAAAGCC
CAGCTAGCAAAGTTGACCCAAGAGCAAAAGAAGGCATACAATGATGAATTAGAATACAGG
GAAAAGCTTTTTATGAAAAAGCAATTGAAGGAGGAGAGAAAGAGACGAAGAATGATGAAG
AAAATGCAGGCTGCAGCTAAGGATTTGCCTATCAATACCAACGAAACAGTAGAAGAGGAG
ACAGGCAGTGCAGCGTCTGTTCCAGTACCAATGCCAGATTTGGCCTTACCTGCTTCTTTT
GATTCTGATAACCCAACTCATAGATACCGTTATCTTGATTCTTCAAATCAGTGGCTTGTG
AGGCCTGTTCTAGAGCCTAATGGTTGGGACCACGATGTTGGTTATGAGGGCATTAATGTA
GAAAGGTTGTTTGTTATCAAAGACAAGATACCTCTGTCTTTCTCCAGTCAGCTTTCTAAG
GACAAAAAGGACGCCAATCTTCAAATGGAAATCGCAAGTTCGGTGAAGCATGGGAATGGG
AAAGTAACTTCTTTAGGTTTTGATATGCAGTCGGTTGGTAAAGACCTTGCTTACACTCTA
CGCAGTGAGACTAGATTCAGCAATTACAGAAAAAATAAGGCAACAGCTGGTCTCTCAGTA
ACTCTCTTAGGTGATGTTATGACAGGTGGAGTGAAAGTTGAGGACAAATTGATTGTTAAC
AAACGAGGACTGCTGGTCATATCTGGGGGTGCTATGTTTGGTCGTGGTGATGTTGCTTAT
GGGGGTAGCTTGGAAGCAACATTAAGAGACAAAGATCATCCTCTTGGTCGTTTCCTATCA
ACGTTGGGGCTCTCGGTCATGGACTGGCATGGAGATCTTGCTATTGGATGCAATTCACAA
ACCCAAATACCTGTTGGACGATACACAAACTTGATTGGACGTGTCAACATTAACAATAAA
GGGTCTGGGCAAGTCAGTATTCTCCTGAACAGCTCAGAACAACTTCAGATTGCTTTGATT
AGCTTGCTTCCTCTGGTCAGAAAACTGATTAGCTACACTCAATCAGTGCAATTTGGATAA