Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400024762
CDS Infomation

pacid=37474773 polypeptide=PGSC0003DMP400016924 locus=PGSC0003DMG400009571 ID=PGSC0003DMT400024762.v4.03 annot-version=v4.03
Sequence

ATGAAGAGTGGGAGCTTGGATGTGGGAAAGAGAGTTGTGGTTGTTGCTGTGAAAGCTTCG
AGAGAGATTTCAAGAAGTGCTTTTATTTGGGCATTAACTCATGTGGTTCAACCAGGGGAT
TCTGTTAAGTTGCTGGTTCTCATTCCTAATCATACCTCAAGTATAAGGCTTTGGGGTTTA
CGTAGATTTAACAGCGATTGCACAGCTAGCAACTGGAGATCACTGTCCGGAACGACTTTA
GATCAAAAGGATTTCATTTCAGAATCGTGTACTCAAATGTTGCTTCAACTTCATGATATT
TATGATCCAAATAAAATGAAGGTGAAGGTCAAAGTCATTTCTGGATCACAGTCTGGAGTA
GTGGCTGCTGAAGCTAGGAGAGTTCAGACTCGATGGGTGGTATTGGATAAGAGAATGAAA
AAAGAGGCTAGAATCTGTATGGAGCAACTGGAATGCAATATTGTTCAGATGAAAAACTCT
CAACCAAAAGTGCTTCGTTTGAATTTCCTTGGATCCCCCAACACTGAAACTGAAGTCTCC
CGTACGTCACAAGCATCTTCGAAACATTTAGGTGAAAAGTCTGATGATCACTGGAATGAG
ATTCGGGTGCCGAATGTGACTCCAGCAAGTAGTCCAGAGCATTCATCATTCACCACAACT
GATGCTGGGACATCCTCAATTTCCAGTCTAGACATAGGGACTTCGCCTCTTTTCTTCTCT
GAGGTCAATTGGGATATGAAGAAGACCTTTTCACATAAATGCAATCATTATTCAGATGAA
TCCGATTCAGATACAGATAGTGAAAAACTGAGATCACCTACAACAAGCATATGTTCCCAG
CAATGGATGCAAGACATTCTCGTTGCAGCAAAGGATTTCTCACATTACTTAAAGAGAGAC
TCACCAAGATCCAAAGGCACACTGCTAAAGTTAAAGCATGATGTTTTCCCAGAGAAATCA
TTTGGACTTGATCGAGAACCTAAAGTTTGTTTAAAGAAAGAAGGGCATGATGTGGAAATA
AACAGTAATATGAGAAAAATGATGTTATTAAACAAAGATTCTCCTGCTGATGCTCCTCCA
CTTTGTTCAATATGTCAACACAAGGCACCTTTATTTGGAAAACCACCTCGGTGGTTCACT
TATTCTGAGCTCGAACGTGCTACCAGTCGATTTTCACAAGCTAACTTTTTAGCTGAGGGT
GGGTATGGTTCTGTACATCGTGGACACTTACCAGATGGCCAAGTTATAGCAGTCAAGCAA
TACAAATCAGCTAGTTCGCAGGGAGACCTTGAATTTTGCTCTGAAGTGGAGGTCCTGAGC
TGTGCTCAACATCGAAATGTTGTGATGCTTATAGGCTTCTGTGTGGAAGATGGAAGAAGG
TTAATAGTTTATGAATACATCTGCAATGGCTCTTTAGATTCTCACCTTTATGGACGTAAT
GGACATCCATTAAATTGGTCAGCACGTCAAAAGATTGCTGTGGGAGCTGCTCGAGGACTG
AGATACCTGCATGAGGAGTGCAGAGTAGGTTGTATTGTTCATCGTGACATGCGGCCAAAT
AATATCCTCCTAACTCATGATTTTGAGCCATTGGTTGGAGACTTTGGGCTGGCGAGGTGG
CAACCCGAAGGAGACTTAGGAGTTGATACCAGAGTAATTGGAACATTTGGGTACTTGGCA
CCGGAATATGCTCAAAGTGGTCAAATAACTGAAAAAGCTGATGCATACTCATTTGGTATA
GTACTATTGGAACTTGTCACTGGAAGAAAAGCTATAGACATTAACCGCCCAAAGGGCCAG
CAGTCCCTCAGTGAATGGGCACGTCCTCTGCTTCGAAAGAGTGCCATCTCTGAACTCATC
GACCCATGTCTAGTGAACTGCTGCTTGGAGCAGGAAGTTCGTGGCATGCTACATTGTGCT
TCATTATGCATTCGCCGGGACCCTAATTCAAGGCCGAGGATGTCTCAGGTACTTCGGATG
TTGGAAGGTGACGTGTTAGTGAGCTAG

Peptide Sequence

PEP ID

PGSC0003DMP400016924
PEP Infomation

pacid=37474773 transcript=PGSC0003DMT400024762 locus=PGSC0003DMG400009571 ID=PGSC0003DMT400024762.v4.03 annot-version=v4.03
Sequence

MKSGSLDVGKRVVVVAVKASREISRSAFIWALTHVVQPGDSVKLLVLIPNHTSSIRLWGL
RRFNSDCTASNWRSLSGTTLDQKDFISESCTQMLLQLHDIYDPNKMKVKVKVISGSQSGV
VAAEARRVQTRWVVLDKRMKKEARICMEQLECNIVQMKNSQPKVLRLNFLGSPNTETEVS
RTSQASSKHLGEKSDDHWNEIRVPNVTPASSPEHSSFTTTDAGTSSISSLDIGTSPLFFS
EVNWDMKKTFSHKCNHYSDESDSDTDSEKLRSPTTSICSQQWMQDILVAAKDFSHYLKRD
SPRSKGTLLKLKHDVFPEKSFGLDREPKVCLKKEGHDVEINSNMRKMMLLNKDSPADAPP
LCSICQHKAPLFGKPPRWFTYSELERATSRFSQANFLAEGGYGSVHRGHLPDGQVIAVKQ
YKSASSQGDLEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLIVYEYICNGSLDSHLYGRN
GHPLNWSARQKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILLTHDFEPLVGDFGLARW
QPEGDLGVDTRVIGTFGYLAPEYAQSGQITEKADAYSFGIVLLELVTGRKAIDINRPKGQ
QSLSEWARPLLRKSAISELIDPCLVNCCLEQEVRGMLHCASLCIRRDPNSRPRMSQVLRM
LEGDVLVS*

Transcript Sequence

Transcript ID

PGSC0003DMT400024762
Transcript Infomation

pacid=37474773 locus=PGSC0003DMG400009571 ID=PGSC0003DMT400024762.v4.03 annot-version=v4.03
Sequence

ATGAAGAGTGGGAGCTTGGATGTGGGAAAGAGAGTTGTGGTTGTTGCTGTGAAAGCTTCG
AGAGAGATTTCAAGAAGTGCTTTTATTTGGGCATTAACTCATGTGGTTCAACCAGGGGAT
TCTGTTAAGTTGCTGGTTCTCATTCCTAATCATACCTCAAGTATAAGGCTTTGGGGTTTA
CGTAGATTTAACAGCGATTGCACAGCTAGCAACTGGAGATCACTGTCCGGAACGACTTTA
GATCAAAAGGATTTCATTTCAGAATCGTGTACTCAAATGTTGCTTCAACTTCATGATATT
TATGATCCAAATAAAATGAAGGTGAAGGTCAAAGTCATTTCTGGATCACAGTCTGGAGTA
GTGGCTGCTGAAGCTAGGAGAGTTCAGACTCGATGGGTGGTATTGGATAAGAGAATGAAA
AAAGAGGCTAGAATCTGTATGGAGCAACTGGAATGCAATATTGTTCAGATGAAAAACTCT
CAACCAAAAGTGCTTCGTTTGAATTTCCTTGGATCCCCCAACACTGAAACTGAAGTCTCC
CGTACGTCACAAGCATCTTCGAAACATTTAGGTGAAAAGTCTGATGATCACTGGAATGAG
ATTCGGGTGCCGAATGTGACTCCAGCAAGTAGTCCAGAGCATTCATCATTCACCACAACT
GATGCTGGGACATCCTCAATTTCCAGTCTAGACATAGGGACTTCGCCTCTTTTCTTCTCT
GAGGTCAATTGGGATATGAAGAAGACCTTTTCACATAAATGCAATCATTATTCAGATGAA
TCCGATTCAGATACAGATAGTGAAAAACTGAGATCACCTACAACAAGCATATGTTCCCAG
CAATGGATGCAAGACATTCTCGTTGCAGCAAAGGATTTCTCACATTACTTAAAGAGAGAC
TCACCAAGATCCAAAGGCACACTGCTAAAGTTAAAGCATGATGTTTTCCCAGAGAAATCA
TTTGGACTTGATCGAGAACCTAAAGTTTGTTTAAAGAAAGAAGGGCATGATGTGGAAATA
AACAGTAATATGAGAAAAATGATGTTATTAAACAAAGATTCTCCTGCTGATGCTCCTCCA
CTTTGTTCAATATGTCAACACAAGGCACCTTTATTTGGAAAACCACCTCGGTGGTTCACT
TATTCTGAGCTCGAACGTGCTACCAGTCGATTTTCACAAGCTAACTTTTTAGCTGAGGGT
GGGTATGGTTCTGTACATCGTGGACACTTACCAGATGGCCAAGTTATAGCAGTCAAGCAA
TACAAATCAGCTAGTTCGCAGGGAGACCTTGAATTTTGCTCTGAAGTGGAGGTCCTGAGC
TGTGCTCAACATCGAAATGTTGTGATGCTTATAGGCTTCTGTGTGGAAGATGGAAGAAGG
TTAATAGTTTATGAATACATCTGCAATGGCTCTTTAGATTCTCACCTTTATGGACGTAAT
GGACATCCATTAAATTGGTCAGCACGTCAAAAGATTGCTGTGGGAGCTGCTCGAGGACTG
AGATACCTGCATGAGGAGTGCAGAGTAGGTTGTATTGTTCATCGTGACATGCGGCCAAAT
AATATCCTCCTAACTCATGATTTTGAGCCATTGGTTGGAGACTTTGGGCTGGCGAGGTGG
CAACCCGAAGGAGACTTAGGAGTTGATACCAGAGTAATTGGAACATTTGGGTACTTGGCA
CCGGAATATGCTCAAAGTGGTCAAATAACTGAAAAAGCTGATGCATACTCATTTGGTATA
GTACTATTGGAACTTGTCACTGGAAGAAAAGCTATAGACATTAACCGCCCAAAGGGCCAG
CAGTCCCTCAGTGAATGGGCACGTCCTCTGCTTCGAAAGAGTGCCATCTCTGAACTCATC
GACCCATGTCTAGTGAACTGCTGCTTGGAGCAGGAAGTTCGTGGCATGCTACATTGTGCT
TCATTATGCATTCGCCGGGACCCTAATTCAAGGCCGAGGATGTCTCAGGTACTTCGGATG
TTGGAAGGTGACGTGTTAGTGAGCTAG