Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400024732
CDS Infomation

pacid=37432021 polypeptide=PGSC0003DMP400016897 locus=PGSC0003DMG400009561 ID=PGSC0003DMT400024732.v4.03 annot-version=v4.03
Sequence

ATGGCATCACAAAAAAACTACAAAAACAAAAACAAAAACAAACATGTCCTCCTCCTTGTT
ATCATCATGTGTTCATTAGCATTTGTGACAGAGGGAAAATTATCAGAGCCTGAGGTTCTT
CTCAAGTTTCGTCAATCGTTAAAGTTCGATGGAGATCCCTTCTCGACGTGGGATATTAAT
GTACCACCTTGCATCAAAGAGAACAATAAGCCTAAATGGAACAATCTATTTTGCGAAAGT
GGAAAGGTTTATGGTTTGAATCTTGAAAATCTAGGGTTAAGTGGTACCATTGATTTGGAC
ATACTTAAAGACTTGCCAAATTTGAGAACCATAAGTGTTTTCAAAAATAAATTTGAAGGT
TCCTTACCAATATTAAATAAATTGCCTGCATTAAAGACTGCTTATTTCTCAAATAACAAG
TTTTCTGGTCCAATTGATCAAAAGATATTTGAAGGGATGAATTCATTAAAGAAACTTCAC
CTAGCAAATAATGAATTTACAGGACAACTCCCTCCTATTTTTGGTGATATGCCAAATCTA
AGGGAGTTGAATATTCAAAACAATAAGTTTGAGGGTCCAATTCCTCCTTCCTATTCACAT
CTATATTTTCCTGCTTATGATGGCAATGATGGTCTTTGTGGTCCTCCTTTAGCAAAATCA
TGCAATAAGGAAGATGAACAAAAAAAGCAAGAATCATCATCATCGTCATCGTCATCAGGT
TGGAAGATTGCCCTTATTGTGGTTATAGTAGTTGTAGTGATAGGCATTGTTGTGTTTGCA
CTAATCAATCGTCGCAAGAAGAATCACCAACAAGAAGTAGTACTTGGAGGATCATCATTA
AGTTCTTCCTCACCAACAAGTCAAGACCAAAAACTAATCCCTCAATCTCATGATCATCTA
AACAAAATGGAACAAGGCCAATCATCAGCTGCATCTACTCCTGATCGCGCGTCTAATGAT
GGCGGTAAAAGAGCTGAAGTTGCTGGACAAAAACTTCTATTCTTGAAAGATGACATTGAG
AAATTTGACTTACCTGATTTGTTGAAAGCCTCTGCTGAAGTATTGGGAAGTGGAGTGTTT
GGTTCAACTTATAAAGCTGCACTTAGTACTGGTCCTGTCATGGTTGTTAAGAGGTTTAGA
CATATGAATAAAGTTGGTAAAGAAGATTTCCATGAACATATGAGAAGGCTTGGAAGATTG
AGTCATAAGAACTTGCTTCCTGTTATTGCTTTCTATTATAGGAAAGAGGAGAAGCTTCTT
GTCTTTGAATATGTCAACAATGTCAGCCTTGCTGTTTATCTTCATGGTAATAGCAAATCA
CGTGGTAACCAAAGTCTTGATTGGCCAACTCGTTTGAAAATTGTGAAAGGAGTAAGCAAA
GGAATTTTATACCTTTACAATGAGCTACCAAGCTTAACATCACCTCATGGTCACCTCAAG
TCTTCAAATGTTCTTCTAACTGAAAACTTTGAGGCAGTTCTCACAGACTATGCCTTACTA
CCAGTAGTAAATGCTGAACATGCACATGAACACATGATCTCATACAAAGCACCAGAGTTA
AAACAATCAGGCAAAATCAATAGAAAAACTGATGTTTGGACACTTGGTATGTTAATCCTT
GAGATCTTGACTGGAAAATTCCCTTCAAATCTTTTAGGCAAAGGAACACAAGATAGCGAT
GATTTAGCGACATGGGTGAATACTACTCTTGGAGATGAATCATCAGAGAAAGAAGTGTTT
GATAAAGAAATGAAAGGAACAAAAGATTGTGAGAGTGAAATGATGAAGTTATTGAAGATT
GGACTAAGTTGTTGTGAGGTTGATGTGGAGAAGAGATGGGATATAAAAGAGGCAGTTGAA
AGGATTGATGAAGTAAAAGAGAAAGGTGATTTCAGCTCTAATGTTGCAACTAATGAAGTT
GACAATATGCATACTTCAAGATAA

Peptide Sequence

PEP ID

PGSC0003DMP400016897
PEP Infomation

pacid=37432021 transcript=PGSC0003DMT400024732 locus=PGSC0003DMG400009561 ID=PGSC0003DMT400024732.v4.03 annot-version=v4.03
Sequence

MASQKNYKNKNKNKHVLLLVIIMCSLAFVTEGKLSEPEVLLKFRQSLKFDGDPFSTWDIN
VPPCIKENNKPKWNNLFCESGKVYGLNLENLGLSGTIDLDILKDLPNLRTISVFKNKFEG
SLPILNKLPALKTAYFSNNKFSGPIDQKIFEGMNSLKKLHLANNEFTGQLPPIFGDMPNL
RELNIQNNKFEGPIPPSYSHLYFPAYDGNDGLCGPPLAKSCNKEDEQKKQESSSSSSSSG
WKIALIVVIVVVVIGIVVFALINRRKKNHQQEVVLGGSSLSSSSPTSQDQKLIPQSHDHL
NKMEQGQSSAASTPDRASNDGGKRAEVAGQKLLFLKDDIEKFDLPDLLKASAEVLGSGVF
GSTYKAALSTGPVMVVKRFRHMNKVGKEDFHEHMRRLGRLSHKNLLPVIAFYYRKEEKLL
VFEYVNNVSLAVYLHGNSKSRGNQSLDWPTRLKIVKGVSKGILYLYNELPSLTSPHGHLK
SSNVLLTENFEAVLTDYALLPVVNAEHAHEHMISYKAPELKQSGKINRKTDVWTLGMLIL
EILTGKFPSNLLGKGTQDSDDLATWVNTTLGDESSEKEVFDKEMKGTKDCESEMMKLLKI
GLSCCEVDVEKRWDIKEAVERIDEVKEKGDFSSNVATNEVDNMHTSR*

Transcript Sequence

Transcript ID

PGSC0003DMT400024732
Transcript Infomation

pacid=37432021 locus=PGSC0003DMG400009561 ID=PGSC0003DMT400024732.v4.03 annot-version=v4.03
Sequence

ATGGCATCACAAAAAAACTACAAAAACAAAAACAAAAACAAACATGTCCTCCTCCTTGTT
ATCATCATGTGTTCATTAGCATTTGTGACAGAGGGAAAATTATCAGAGCCTGAGGTTCTT
CTCAAGTTTCGTCAATCGTTAAAGTTCGATGGAGATCCCTTCTCGACGTGGGATATTAAT
GTACCACCTTGCATCAAAGAGAACAATAAGCCTAAATGGAACAATCTATTTTGCGAAAGT
GGAAAGGTTTATGGTTTGAATCTTGAAAATCTAGGGTTAAGTGGTACCATTGATTTGGAC
ATACTTAAAGACTTGCCAAATTTGAGAACCATAAGTGTTTTCAAAAATAAATTTGAAGGT
TCCTTACCAATATTAAATAAATTGCCTGCATTAAAGACTGCTTATTTCTCAAATAACAAG
TTTTCTGGTCCAATTGATCAAAAGATATTTGAAGGGATGAATTCATTAAAGAAACTTCAC
CTAGCAAATAATGAATTTACAGGACAACTCCCTCCTATTTTTGGTGATATGCCAAATCTA
AGGGAGTTGAATATTCAAAACAATAAGTTTGAGGGTCCAATTCCTCCTTCCTATTCACAT
CTATATTTTCCTGCTTATGATGGCAATGATGGTCTTTGTGGTCCTCCTTTAGCAAAATCA
TGCAATAAGGAAGATGAACAAAAAAAGCAAGAATCATCATCATCGTCATCGTCATCAGGT
TGGAAGATTGCCCTTATTGTGGTTATAGTAGTTGTAGTGATAGGCATTGTTGTGTTTGCA
CTAATCAATCGTCGCAAGAAGAATCACCAACAAGAAGTAGTACTTGGAGGATCATCATTA
AGTTCTTCCTCACCAACAAGTCAAGACCAAAAACTAATCCCTCAATCTCATGATCATCTA
AACAAAATGGAACAAGGCCAATCATCAGCTGCATCTACTCCTGATCGCGCGTCTAATGAT
GGCGGTAAAAGAGCTGAAGTTGCTGGACAAAAACTTCTATTCTTGAAAGATGACATTGAG
AAATTTGACTTACCTGATTTGTTGAAAGCCTCTGCTGAAGTATTGGGAAGTGGAGTGTTT
GGTTCAACTTATAAAGCTGCACTTAGTACTGGTCCTGTCATGGTTGTTAAGAGGTTTAGA
CATATGAATAAAGTTGGTAAAGAAGATTTCCATGAACATATGAGAAGGCTTGGAAGATTG
AGTCATAAGAACTTGCTTCCTGTTATTGCTTTCTATTATAGGAAAGAGGAGAAGCTTCTT
GTCTTTGAATATGTCAACAATGTCAGCCTTGCTGTTTATCTTCATGGTAATAGCAAATCA
CGTGGTAACCAAAGTCTTGATTGGCCAACTCGTTTGAAAATTGTGAAAGGAGTAAGCAAA
GGAATTTTATACCTTTACAATGAGCTACCAAGCTTAACATCACCTCATGGTCACCTCAAG
TCTTCAAATGTTCTTCTAACTGAAAACTTTGAGGCAGTTCTCACAGACTATGCCTTACTA
CCAGTAGTAAATGCTGAACATGCACATGAACACATGATCTCATACAAAGCACCAGAGTTA
AAACAATCAGGCAAAATCAATAGAAAAACTGATGTTTGGACACTTGGTATGTTAATCCTT
GAGATCTTGACTGGAAAATTCCCTTCAAATCTTTTAGGCAAAGGAACACAAGATAGCGAT
GATTTAGCGACATGGGTGAATACTACTCTTGGAGATGAATCATCAGAGAAAGAAGTGTTT
GATAAAGAAATGAAAGGAACAAAAGATTGTGAGAGTGAAATGATGAAGTTATTGAAGATT
GGACTAAGTTGTTGTGAGGTTGATGTGGAGAAGAGATGGGATATAAAAGAGGCAGTTGAA
AGGATTGATGAAGTAAAAGAGAAAGGTGATTTCAGCTCTAATGTTGCAACTAATGAAGTT
GACAATATGCATACTTCAAGATAA