Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400024673
CDS Infomation

pacid=37470080 polypeptide=PGSC0003DMP400016861 locus=PGSC0003DMG401009541 ID=PGSC0003DMT400024673.v4.03 annot-version=v4.03
Sequence

ATGAAAATACCTTCAAAGAAACCTCACTTCTTCAAACCAATTCTTCCAGGCTTCAAAAAT
GGAATTAAAATTCCTATAGGTTTTTTGAAGTATCTGAAGGGATACGAGCATATTAAACGT
GCTGTACTGAAAAGGGGTGGTAAGAAATGGCGGATTAAGCTGAATGAACATCGATTTGAA
GATGGTAATTGGGGAAAATTTGTGGAGGAGAATGATTTGCAATTGGGAGATTTGTTGGTG
TTTAGACATGAAGGAAATATGGAATTTGAGGTTTCTGTATTTGATTCAAGTCATTGTGAT
AGAGAATATGCAGAGTATCTGCAGGAAGAAGGAGAAGGAGGAAGAGCCCGGACTGTTGAG
GAAATTTCGAAGGAATTTGAGTTTAAAGAAGCTGCTACTCGCAACCAATCTCATGTTGTA
TGCAAAGTTAGAGCCTATTGCCTTTCAAAATGTTACTTTCGCCTTCCTGGAAAATTTGCA
AGGGCAAACGGTCTCATAAACAAGAAATGTAGTTTGATTATTAGAGATGAAAAACGAAGG
TCATGGAGTTTAAAGCTATATACCTCCTATTCTCAAGTCTATATTGGAGGTAGATGGGCT
GAACTCCGTGATGCAAATGACATAAAGGAGGGAGATCATATAACATTCAAGGTTGTTGCT
AATGGAGAAATGCCAATATGGGAATTCCATACAAATGTAACAGAAAAATCGAAGTGCAAC
ATCATGTCATCACACGAGGCTTTTCGCAACATAGAAGCTGCAAAAAACATTCCTCTCTCT
CACCCTCATTTTGTTTGTACCATGAAATCATATTACCTTTCGAAGTGTTCTCTGCGAGTT
CCAGTCTCATTTGCACGGTTAAACGGTCTCAGAAACAGGACATGTACAATAACAATAAGA
GACAAGCGCCGGTCATGGACATTTAAGCTATATGCCCGTGGGGTAAACACCACCATTGTT
GGCGGATGGCACAAGTTCTGCATTGTGAATTGCTTAAAGGAAGGAGATTACTTAATGTTT
GAGATACTTGACAATGGAGAGAAGCCAATATTGAAGTTTCACGATATGAAAGGAAGTGCA
TCACCTCAGCCCGAAGGAAAGATGGTCAATTTGGACGCTAAAAGTGTTTCCACAGAAGCA
ACAGGCGTTAAGATTAAGACCTCATACGTGACTGCTCCGAAAGTACTACCTGCTTCAATA
TCTGCTAATGATGCTAGCCCTCATTTTATTTCTATTATTAAGCCCTATTCCATCTTCAAA
CATTTTCTGTATATTCCATTGGCTTTTGCAAAATCAAATGGCTGGATGAATAGACGTTTT
GAGATGATTCTCATGGATGAACAACAGAGATCGTGGCCAGTTCGACTAGGGCCAGTGTCA
GATGATCACATCGGAATTCACATTGGATGGCAAAAGTTCAAAGAAGCAAATGATGTCCAA
GTAGGAGATATCTATAGATTTGAACTCATCAACAATGAAAAAATACCTGTAGCCTATTTC
CATCGTATATATTCTGGAAAGGATGCCAAGCAAAGCCCTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400016861
PEP Infomation

pacid=37470080 transcript=PGSC0003DMT400024673 locus=PGSC0003DMG401009541 ID=PGSC0003DMT400024673.v4.03 annot-version=v4.03
Sequence

MKIPSKKPHFFKPILPGFKNGIKIPIGFLKYLKGYEHIKRAVLKRGGKKWRIKLNEHRFE
DGNWGKFVEENDLQLGDLLVFRHEGNMEFEVSVFDSSHCDREYAEYLQEEGEGGRARTVE
EISKEFEFKEAATRNQSHVVCKVRAYCLSKCYFRLPGKFARANGLINKKCSLIIRDEKRR
SWSLKLYTSYSQVYIGGRWAELRDANDIKEGDHITFKVVANGEMPIWEFHTNVTEKSKCN
IMSSHEAFRNIEAAKNIPLSHPHFVCTMKSYYLSKCSLRVPVSFARLNGLRNRTCTITIR
DKRRSWTFKLYARGVNTTIVGGWHKFCIVNCLKEGDYLMFEILDNGEKPILKFHDMKGSA
SPQPEGKMVNLDAKSVSTEATGVKIKTSYVTAPKVLPASISANDASPHFISIIKPYSIFK
HFLYIPLAFAKSNGWMNRRFEMILMDEQQRSWPVRLGPVSDDHIGIHIGWQKFKEANDVQ
VGDIYRFELINNEKIPVAYFHRIYSGKDAKQSP*

Transcript Sequence

Transcript ID

PGSC0003DMT400024673
Transcript Infomation

pacid=37470080 locus=PGSC0003DMG401009541 ID=PGSC0003DMT400024673.v4.03 annot-version=v4.03
Sequence

ATGAAAATACCTTCAAAGAAACCTCACTTCTTCAAACCAATTCTTCCAGGCTTCAAAAAT
GGAATTAAAATTCCTATAGGTTTTTTGAAGTATCTGAAGGGATACGAGCATATTAAACGT
GCTGTACTGAAAAGGGGTGGTAAGAAATGGCGGATTAAGCTGAATGAACATCGATTTGAA
GATGGTAATTGGGGAAAATTTGTGGAGGAGAATGATTTGCAATTGGGAGATTTGTTGGTG
TTTAGACATGAAGGAAATATGGAATTTGAGGTTTCTGTATTTGATTCAAGTCATTGTGAT
AGAGAATATGCAGAGTATCTGCAGGAAGAAGGAGAAGGAGGAAGAGCCCGGACTGTTGAG
GAAATTTCGAAGGAATTTGAGTTTAAAGAAGCTGCTACTCGCAACCAATCTCATGTTGTA
TGCAAAGTTAGAGCCTATTGCCTTTCAAAATGTTACTTTCGCCTTCCTGGAAAATTTGCA
AGGGCAAACGGTCTCATAAACAAGAAATGTAGTTTGATTATTAGAGATGAAAAACGAAGG
TCATGGAGTTTAAAGCTATATACCTCCTATTCTCAAGTCTATATTGGAGGTAGATGGGCT
GAACTCCGTGATGCAAATGACATAAAGGAGGGAGATCATATAACATTCAAGGTTGTTGCT
AATGGAGAAATGCCAATATGGGAATTCCATACAAATGTAACAGAAAAATCGAAGTGCAAC
ATCATGTCATCACACGAGGCTTTTCGCAACATAGAAGCTGCAAAAAACATTCCTCTCTCT
CACCCTCATTTTGTTTGTACCATGAAATCATATTACCTTTCGAAGTGTTCTCTGCGAGTT
CCAGTCTCATTTGCACGGTTAAACGGTCTCAGAAACAGGACATGTACAATAACAATAAGA
GACAAGCGCCGGTCATGGACATTTAAGCTATATGCCCGTGGGGTAAACACCACCATTGTT
GGCGGATGGCACAAGTTCTGCATTGTGAATTGCTTAAAGGAAGGAGATTACTTAATGTTT
GAGATACTTGACAATGGAGAGAAGCCAATATTGAAGTTTCACGATATGAAAGGAAGTGCA
TCACCTCAGCCCGAAGGAAAGATGGTCAATTTGGACGCTAAAAGTGTTTCCACAGAAGCA
ACAGGCGTTAAGATTAAGACCTCATACGTGACTGCTCCGAAAGTACTACCTGCTTCAATA
TCTGCTAATGATGCTAGCCCTCATTTTATTTCTATTATTAAGCCCTATTCCATCTTCAAA
CATTTTCTGTATATTCCATTGGCTTTTGCAAAATCAAATGGCTGGATGAATAGACGTTTT
GAGATGATTCTCATGGATGAACAACAGAGATCGTGGCCAGTTCGACTAGGGCCAGTGTCA
GATGATCACATCGGAATTCACATTGGATGGCAAAAGTTCAAAGAAGCAAATGATGTCCAA
GTAGGAGATATCTATAGATTTGAACTCATCAACAATGAAAAAATACCTGTAGCCTATTTC
CATCGTATATATTCTGGAAAGGATGCCAAGCAAAGCCCTTGA