Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400024646
CDS Infomation

pacid=37470315 polypeptide=PGSC0003DMP400016846 locus=PGSC0003DMG400009536 ID=PGSC0003DMT400024646.v4.03 annot-version=v4.03
Sequence

ATGGCTCCAAGATTGAATTTTTCTGACTGGTGGGGTAAAGATAAACAAAGGGGAACACCA
GTTATAGTGAAAATGGAGAACCCCAATTTCTCCATTGTTGAAATTGATGGTCCTGATGCT
GCATTTAAGCCTATAGAGAAGAGTAGAGGCAAAAATGCTAAACAAGTGACATGGGTTTTG
TTGCTTAAGGCTAACCAAGCTGTTGGTTGTGTTGCTTGGCTTGCAACAATTTTGTGGAGT
TTAATTGGTACTATCAAGAATAGGTTGATTTTGAGAAAAGGGGTTTCTCTTGCAAGTGAA
AAACTTGGAAAGAGTAATCTACTTTTTAGAATAATCAAAGTTTGTTTGGGGGTTTCTTTG
GTTATGTTAGCTTTTGAAGTGATTGCTTACTTCAAAGGTTGGCATTATTTTCAGAATCCA
AATTTGTATGTACCACATACTTCTGATGTTTTGGGGTTGTTTCATATAATATATGTTGTT
TGGTTGGATTTTCGCGCTGATTATATCGCGCCTTCAGTTCAAAAACTCTCCACATTCTGT
ACTGTTTTATTCCTAATTCAGTCGTTAGATCGTTTGGTACTTTGTTTGGGTTGCTTTTAT
ATTAAATGCAAGAAGATTAAGCCAAGGATTGAAGGGGATCCCTTTAAATCAGATGATCTT
GAGGGATCAAACAACAGTTACTACCCTATGGTTCTTGTGCAGATTCCTATGTGTAACGAA
AAAGAGGTATATGAGATGTCTATATCAGCAGTTTGCCAACTTGATTGGCCAAAAGACCGT
TTGTTGATTCAAATTCTTGATGATTCCGACAATGAGTGCATCCAAGACTTAATAAAGTCA
GAGGTCGCGAAATGGAACCACAAGGGTGTCAACATAATTTACAGGCACCGTCTGGTTAGA
ACTGGTTACAAAGCCGGGAACTTGAAGTCCGCAATGAGTTGTGACTATGTGAAGGATTAT
GAATTTGTTGCAATCTTTGATGCAGACTTTCAACCAACTCCAGATTTTCTTAAGCAAACA
GTCCCGCATTTCAAGGACAACCCCGAGCTAGGATTGGTTCAAACAAGATGGGCATTTGTT
AACAAGGATGAGAACTTGCTGACTCGTCTACAAAACATTAATCTGTGTTTTCATTTTGAG
GTGGAACAACAGGTGAATGGAGTATTCTTGAACTTCTTTGGTTTCAACGGAACTGCTGGT
ATTTGGAGAATCAAAGCTTTGGAAGAGTCTGGAGGTTGGCTTGAGAGGACAACCGTGGAG
GATATGGATATTGCTGTTCGTGCGCATCTCAACGGTTGGAAGTTCATATATCTTAATGAT
GTGCGGGTCCTGTGTGAAGTTCCTGAATCTTTTGAAGCTTATAGGAAGCAGCAACATCGA
TGGCATTCGGGCCCCATGCAACTTTTCCGAGTTTGTCTTCCTGCTATTGTTTCTTCCAAG
ATATCAATATGGAAGAAAGCCAACTTAATACTTCTTTTCTTTTTGTTGAGAAAGCTCATT
CTTCCCTTCTATTCATTCACATTGTTTTGTGTAGTTCTTCCTCTAACCATGTTCATCCCG
GAAGCCGAGCTCCCTTTCTGGGTTGTTTGCTACATACCCATTCTTATGACACTTCTAAAC
ATTCTTCCAGCACCAAAATCCATTCCTTTCATCGCCCCGTACCTCCTTTTCGAAAACACT
ATGTCAGTGACAAAGTTCAATGCTATGGTATCTGGACTTTTCCAATTGGGAAGTTCGTAC
GAGTGGGTTGTTACCAAAAAAGCAGGAAGGTCTTCTGAATCCGACCTATTGGCCGCTGCT
GAAAAAGATTTGAAAGCATTTGGAGCACCACAGATTAGCAGAGGGGCTTCGGAAAGTGAA
CTTTCTGAGCTGAACCGATTGAACAAACAGAAAGATGAAACTTCTACACCTGTCAAGAAG
AGCAACAAAATATACAGAAAAGAGCTAGCTCTTGCTTTCTTACTCTTAACGGCGTCAGCT
AGAAGCCTTTTATCTGCTCATGGTCTCCACTTTTACTTCCTTCTTTTCCAAGGAGTGACA
TTCCTCCTCGTTGGTCTTGATCTTATCGGAGAGCAGATTAGTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400016846
PEP Infomation

pacid=37470315 transcript=PGSC0003DMT400024646 locus=PGSC0003DMG400009536 ID=PGSC0003DMT400024646.v4.03 annot-version=v4.03
Sequence

MAPRLNFSDWWGKDKQRGTPVIVKMENPNFSIVEIDGPDAAFKPIEKSRGKNAKQVTWVL
LLKANQAVGCVAWLATILWSLIGTIKNRLILRKGVSLASEKLGKSNLLFRIIKVCLGVSL
VMLAFEVIAYFKGWHYFQNPNLYVPHTSDVLGLFHIIYVVWLDFRADYIAPSVQKLSTFC
TVLFLIQSLDRLVLCLGCFYIKCKKIKPRIEGDPFKSDDLEGSNNSYYPMVLVQIPMCNE
KEVYEMSISAVCQLDWPKDRLLIQILDDSDNECIQDLIKSEVAKWNHKGVNIIYRHRLVR
TGYKAGNLKSAMSCDYVKDYEFVAIFDADFQPTPDFLKQTVPHFKDNPELGLVQTRWAFV
NKDENLLTRLQNINLCFHFEVEQQVNGVFLNFFGFNGTAGIWRIKALEESGGWLERTTVE
DMDIAVRAHLNGWKFIYLNDVRVLCEVPESFEAYRKQQHRWHSGPMQLFRVCLPAIVSSK
ISIWKKANLILLFFLLRKLILPFYSFTLFCVVLPLTMFIPEAELPFWVVCYIPILMTLLN
ILPAPKSIPFIAPYLLFENTMSVTKFNAMVSGLFQLGSSYEWVVTKKAGRSSESDLLAAA
EKDLKAFGAPQISRGASESELSELNRLNKQKDETSTPVKKSNKIYRKELALAFLLLTASA
RSLLSAHGLHFYFLLFQGVTFLLVGLDLIGEQIS*

Transcript Sequence

Transcript ID

PGSC0003DMT400024646
Transcript Infomation

pacid=37470315 locus=PGSC0003DMG400009536 ID=PGSC0003DMT400024646.v4.03 annot-version=v4.03
Sequence

ATGGCTCCAAGATTGAATTTTTCTGACTGGTGGGGTAAAGATAAACAAAGGGGAACACCA
GTTATAGTGAAAATGGAGAACCCCAATTTCTCCATTGTTGAAATTGATGGTCCTGATGCT
GCATTTAAGCCTATAGAGAAGAGTAGAGGCAAAAATGCTAAACAAGTGACATGGGTTTTG
TTGCTTAAGGCTAACCAAGCTGTTGGTTGTGTTGCTTGGCTTGCAACAATTTTGTGGAGT
TTAATTGGTACTATCAAGAATAGGTTGATTTTGAGAAAAGGGGTTTCTCTTGCAAGTGAA
AAACTTGGAAAGAGTAATCTACTTTTTAGAATAATCAAAGTTTGTTTGGGGGTTTCTTTG
GTTATGTTAGCTTTTGAAGTGATTGCTTACTTCAAAGGTTGGCATTATTTTCAGAATCCA
AATTTGTATGTACCACATACTTCTGATGTTTTGGGGTTGTTTCATATAATATATGTTGTT
TGGTTGGATTTTCGCGCTGATTATATCGCGCCTTCAGTTCAAAAACTCTCCACATTCTGT
ACTGTTTTATTCCTAATTCAGTCGTTAGATCGTTTGGTACTTTGTTTGGGTTGCTTTTAT
ATTAAATGCAAGAAGATTAAGCCAAGGATTGAAGGGGATCCCTTTAAATCAGATGATCTT
GAGGGATCAAACAACAGTTACTACCCTATGGTTCTTGTGCAGATTCCTATGTGTAACGAA
AAAGAGGTATATGAGATGTCTATATCAGCAGTTTGCCAACTTGATTGGCCAAAAGACCGT
TTGTTGATTCAAATTCTTGATGATTCCGACAATGAGTGCATCCAAGACTTAATAAAGTCA
GAGGTCGCGAAATGGAACCACAAGGGTGTCAACATAATTTACAGGCACCGTCTGGTTAGA
ACTGGTTACAAAGCCGGGAACTTGAAGTCCGCAATGAGTTGTGACTATGTGAAGGATTAT
GAATTTGTTGCAATCTTTGATGCAGACTTTCAACCAACTCCAGATTTTCTTAAGCAAACA
GTCCCGCATTTCAAGGACAACCCCGAGCTAGGATTGGTTCAAACAAGATGGGCATTTGTT
AACAAGGATGAGAACTTGCTGACTCGTCTACAAAACATTAATCTGTGTTTTCATTTTGAG
GTGGAACAACAGGTGAATGGAGTATTCTTGAACTTCTTTGGTTTCAACGGAACTGCTGGT
ATTTGGAGAATCAAAGCTTTGGAAGAGTCTGGAGGTTGGCTTGAGAGGACAACCGTGGAG
GATATGGATATTGCTGTTCGTGCGCATCTCAACGGTTGGAAGTTCATATATCTTAATGAT
GTGCGGGTCCTGTGTGAAGTTCCTGAATCTTTTGAAGCTTATAGGAAGCAGCAACATCGA
TGGCATTCGGGCCCCATGCAACTTTTCCGAGTTTGTCTTCCTGCTATTGTTTCTTCCAAG
ATATCAATATGGAAGAAAGCCAACTTAATACTTCTTTTCTTTTTGTTGAGAAAGCTCATT
CTTCCCTTCTATTCATTCACATTGTTTTGTGTAGTTCTTCCTCTAACCATGTTCATCCCG
GAAGCCGAGCTCCCTTTCTGGGTTGTTTGCTACATACCCATTCTTATGACACTTCTAAAC
ATTCTTCCAGCACCAAAATCCATTCCTTTCATCGCCCCGTACCTCCTTTTCGAAAACACT
ATGTCAGTGACAAAGTTCAATGCTATGGTATCTGGACTTTTCCAATTGGGAAGTTCGTAC
GAGTGGGTTGTTACCAAAAAAGCAGGAAGGTCTTCTGAATCCGACCTATTGGCCGCTGCT
GAAAAAGATTTGAAAGCATTTGGAGCACCACAGATTAGCAGAGGGGCTTCGGAAAGTGAA
CTTTCTGAGCTGAACCGATTGAACAAACAGAAAGATGAAACTTCTACACCTGTCAAGAAG
AGCAACAAAATATACAGAAAAGAGCTAGCTCTTGCTTTCTTACTCTTAACGGCGTCAGCT
AGAAGCCTTTTATCTGCTCATGGTCTCCACTTTTACTTCCTTCTTTTCCAAGGAGTGACA
TTCCTCCTCGTTGGTCTTGATCTTATCGGAGAGCAGATTAGTTAA