Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400024628
CDS Infomation

pacid=37470868 polypeptide=PGSC0003DMP400016835 locus=PGSC0003DMG400009529 ID=PGSC0003DMT400024628.v4.03 annot-version=v4.03
Sequence

ATGACTACTCACCAGGCTCACTGTTTGATTTTGTCATATCCAGTCCAAGGTCATATCAAC
CCAATGCTCCAATTCTCCAAACGTTTACAATCCAAACGTGTTAAAATCACTATAGCACTC
ACAAAATCCTTTTTGAAAAACATGAAAGAATTGCCAACTTCTATGTCAATCGAGGCCATA
TCTGATGGCTATGATGATGGTGGTCGCGATCAAGCAGGATCTTTCGTTGCCTATGTTACA
CGATTCAAAGAAGTTGGCTCGGATACTCTTTCTCAACTTATTCAAAAATTGGCAAATAGT
GGATGCCCTGTAAATTGCATAGTATATGATCCATTCCTCCCTTGGGCTGTTGAAGTTGCA
AAGAATTTTGGATTAATTAGTGCTGCATTTTTCACACAAAATTGTGCTGTGGATAACATT
TATTACCATGTACATAAAGGGGTAATAAAACTTCCACCTACTCAAAATAATGAAGAAATA
TTAATTCCTGGATTTTCAAGTCCAATTGAGGCATCAGATGCACCTACTTTTGTTATTGAT
CCTGAAGCAGAAAGAATACTTGAAATGTTGGTCAATCAATTCTCAAATCTTGACAAAGTG
GATTGGGTCCTAATCAATAGTTTCTATGAGTTGGAAAAAGAGGTAATTGATTGGATGTCC
AAGATGTATCCAATCAAGACAATTGGACCAACAATACCATCAATGTACTTAGACAAGAGA
CTACATGATGACAAAGAGTATGGCCTTAGTATCTTCAAGCCAATGACAAATGAATGCCTA
AATTGGTTAAATCATCAACCAATTAGCTCAGTGGTGTATGTCCATTGA

Peptide Sequence

PEP ID

PGSC0003DMP400016835
PEP Infomation

pacid=37470868 transcript=PGSC0003DMT400024628 locus=PGSC0003DMG400009529 ID=PGSC0003DMT400024628.v4.03 annot-version=v4.03
Sequence

MTTHQAHCLILSYPVQGHINPMLQFSKRLQSKRVKITIALTKSFLKNMKELPTSMSIEAI
SDGYDDGGRDQAGSFVAYVTRFKEVGSDTLSQLIQKLANSGCPVNCIVYDPFLPWAVEVA
KNFGLISAAFFTQNCAVDNIYYHVHKGVIKLPPTQNNEEILIPGFSSPIEASDAPTFVID
PEAERILEMLVNQFSNLDKVDWVLINSFYELEKEVIDWMSKMYPIKTIGPTIPSMYLDKR
LHDDKEYGLSIFKPMTNECLNWLNHQPISSVVYVH*

Transcript Sequence

Transcript ID

PGSC0003DMT400024628
Transcript Infomation

pacid=37470868 locus=PGSC0003DMG400009529 ID=PGSC0003DMT400024628.v4.03 annot-version=v4.03
Sequence

ATGACTACTCACCAGGCTCACTGTTTGATTTTGTCATATCCAGTCCAAGGTCATATCAAC
CCAATGCTCCAATTCTCCAAACGTTTACAATCCAAACGTGTTAAAATCACTATAGCACTC
ACAAAATCCTTTTTGAAAAACATGAAAGAATTGCCAACTTCTATGTCAATCGAGGCCATA
TCTGATGGCTATGATGATGGTGGTCGCGATCAAGCAGGATCTTTCGTTGCCTATGTTACA
CGATTCAAAGAAGTTGGCTCGGATACTCTTTCTCAACTTATTCAAAAATTGGCAAATAGT
GGATGCCCTGTAAATTGCATAGTATATGATCCATTCCTCCCTTGGGCTGTTGAAGTTGCA
AAGAATTTTGGATTAATTAGTGCTGCATTTTTCACACAAAATTGTGCTGTGGATAACATT
TATTACCATGTACATAAAGGGGTAATAAAACTTCCACCTACTCAAAATAATGAAGAAATA
TTAATTCCTGGATTTTCAAGTCCAATTGAGGCATCAGATGCACCTACTTTTGTTATTGAT
CCTGAAGCAGAAAGAATACTTGAAATGTTGGTCAATCAATTCTCAAATCTTGACAAAGTG
GATTGGGTCCTAATCAATAGTTTCTATGAGTTGGAAAAAGAGGTAATTGATTGGATGTCC
AAGATGTATCCAATCAAGACAATTGGACCAACAATACCATCAATGTACTTAGACAAGAGA
CTACATGATGACAAAGAGTATGGCCTTAGTATCTTCAAGCCAATGACAAATGAATGCCTA
AATTGGTTAAATCATCAACCAATTAGCTCAGTGGTGTATGTCCATTGA