Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400024580
CDS Infomation

pacid=37459088 polypeptide=PGSC0003DMP400016811 locus=PGSC0003DMG400009503 ID=PGSC0003DMT400024580.v4.03 annot-version=v4.03
Sequence

ATGCGTTCGGATTCCGGGTCGGGTTTTCCATCGTCGGTGAGAATTTCTGGGCTCAACACC
ACCGGAAAAGGTGGACCAGCGTTTGTTGGTCAGGTTTTTAGCATGTGTGACCTTTCCGGA
ACTGGTCTTATGGCTGTATCGACCCACTTTGACATACCCTTTCTCTCCAAAAGGACTCCA
GAATGGCTGAAGAAAATGTTTGCAGCAGTTACTAAGAGCGAAAGAAATGGTCCAGTATTC
CGTTTTTTTATGGATCTCGGTGATGCAGTTTCTTATGTTAAAAAGCTGAATATTCCAAGT
GGAGTGGTGGGGGCATGCCGTCTTGATTTAGCATATGAACATTTTAAGGAAAAACCACAC
TTGTTCCAATTTGTTCCGAACGAGAAACAGGTCAAGGAAGCCAACAAACTGCTTAAGGCA
ATGCAGCAGTCTGATGGAAGGAAAAAGGTGGACGGTGTTCCTGTTTTCAGTGCTCAGAAC
TTAGATATTGCGATAGCAACTACAGATGGTATAAAATGGTATACTCCTTATTTCTTTGAC
AAAAACATGTTAGATAACATTCTTGAAGAATCTGTTGACCAACATTTCCATTCACTGATT
CAAACAAGACACATGCAACGCCGAAGGGATGTTTTTGATGACAACTTGGCTGCCGAAGTA
ATTGAAGAGATGGGAGATAGTATGTGGGAGCCTCCTGAGGTGCAAGATGCACTCGATGAA
GTGGGTCCACCAGCGATACCTTTGAGTGTCATATCAAAGGCTGCTGAAATTCAGCTTCTA
CATGCTGTCGATAAGGTTCTTCTAGGGAACAGGTGGTTGCGGAAAGCAACAGGAATTCAA
CCCAAGTTTCCTTACATGGTTGACTCGTTTGAAAAGAGGAGCGCAGCGTCTTTCCAGAGA
GCATGTAGGATTTCGGGGTTTGTTAATAATTCTCCGTTGGAAGCTAATAATAACCAACTA
CAGTGCATTGGCACCTCAGCAGTCGAGGGAGCTGATAATATCTCCAATAAGAAACGATTA
GGGCTGGATATCCGACTCCCTTTTGGGGGCTGGTTGAGTCCTGCATGGAGTAAAGGACAG
AAGCAGCAGATAATAAAAGATAAAAGGGAATACAGAGAGGTACATCCATCACCTCTTCTT
CCGAAGATTACTATGGTTGGTATCTCAATGGGTGAGGCTGGGCAGGTGAGCAAAGCCACT
TTGAAGAAGACAATGGAGGATTTGACGAAAGAACTGGAATATACAGATCAGAAAAGCTCA
TCTGGGAATAATGTTGATGAAATAACATTTGAAGAGAGGGATCCTTTATTCGTAGCTAAC
GTTGGTGATTATCATTCTAGTGCAGCAAAGGGAGGTTCAACTCGATGGGTTCGAGGAGGA
ACGTTTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400016811
PEP Infomation

pacid=37459088 transcript=PGSC0003DMT400024580 locus=PGSC0003DMG400009503 ID=PGSC0003DMT400024580.v4.03 annot-version=v4.03
Sequence

MRSDSGSGFPSSVRISGLNTTGKGGPAFVGQVFSMCDLSGTGLMAVSTHFDIPFLSKRTP
EWLKKMFAAVTKSERNGPVFRFFMDLGDAVSYVKKLNIPSGVVGACRLDLAYEHFKEKPH
LFQFVPNEKQVKEANKLLKAMQQSDGRKKVDGVPVFSAQNLDIAIATTDGIKWYTPYFFD
KNMLDNILEESVDQHFHSLIQTRHMQRRRDVFDDNLAAEVIEEMGDSMWEPPEVQDALDE
VGPPAIPLSVISKAAEIQLLHAVDKVLLGNRWLRKATGIQPKFPYMVDSFEKRSAASFQR
ACRISGFVNNSPLEANNNQLQCIGTSAVEGADNISNKKRLGLDIRLPFGGWLSPAWSKGQ
KQQIIKDKREYREVHPSPLLPKITMVGISMGEAGQVSKATLKKTMEDLTKELEYTDQKSS
SGNNVDEITFEERDPLFVANVGDYHSSAAKGGSTRWVRGGTF*

Transcript Sequence

Transcript ID

PGSC0003DMT400024580
Transcript Infomation

pacid=37459088 locus=PGSC0003DMG400009503 ID=PGSC0003DMT400024580.v4.03 annot-version=v4.03
Sequence

ATGCGTTCGGATTCCGGGTCGGGTTTTCCATCGTCGGTGAGAATTTCTGGGCTCAACACC
ACCGGAAAAGGTGGACCAGCGTTTGTTGGTCAGGTTTTTAGCATGTGTGACCTTTCCGGA
ACTGGTCTTATGGCTGTATCGACCCACTTTGACATACCCTTTCTCTCCAAAAGGACTCCA
GAATGGCTGAAGAAAATGTTTGCAGCAGTTACTAAGAGCGAAAGAAATGGTCCAGTATTC
CGTTTTTTTATGGATCTCGGTGATGCAGTTTCTTATGTTAAAAAGCTGAATATTCCAAGT
GGAGTGGTGGGGGCATGCCGTCTTGATTTAGCATATGAACATTTTAAGGAAAAACCACAC
TTGTTCCAATTTGTTCCGAACGAGAAACAGGTCAAGGAAGCCAACAAACTGCTTAAGGCA
ATGCAGCAGTCTGATGGAAGGAAAAAGGTGGACGGTGTTCCTGTTTTCAGTGCTCAGAAC
TTAGATATTGCGATAGCAACTACAGATGGTATAAAATGGTATACTCCTTATTTCTTTGAC
AAAAACATGTTAGATAACATTCTTGAAGAATCTGTTGACCAACATTTCCATTCACTGATT
CAAACAAGACACATGCAACGCCGAAGGGATGTTTTTGATGACAACTTGGCTGCCGAAGTA
ATTGAAGAGATGGGAGATAGTATGTGGGAGCCTCCTGAGGTGCAAGATGCACTCGATGAA
GTGGGTCCACCAGCGATACCTTTGAGTGTCATATCAAAGGCTGCTGAAATTCAGCTTCTA
CATGCTGTCGATAAGGTTCTTCTAGGGAACAGGTGGTTGCGGAAAGCAACAGGAATTCAA
CCCAAGTTTCCTTACATGGTTGACTCGTTTGAAAAGAGGAGCGCAGCGTCTTTCCAGAGA
GCATGTAGGATTTCGGGGTTTGTTAATAATTCTCCGTTGGAAGCTAATAATAACCAACTA
CAGTGCATTGGCACCTCAGCAGTCGAGGGAGCTGATAATATCTCCAATAAGAAACGATTA
GGGCTGGATATCCGACTCCCTTTTGGGGGCTGGTTGAGTCCTGCATGGAGTAAAGGACAG
AAGCAGCAGATAATAAAAGATAAAAGGGAATACAGAGAGGTACATCCATCACCTCTTCTT
CCGAAGATTACTATGGTTGGTATCTCAATGGGTGAGGCTGGGCAGGTGAGCAAAGCCACT
TTGAAGAAGACAATGGAGGATTTGACGAAAGAACTGGAATATACAGATCAGAAAAGCTCA
TCTGGGAATAATGTTGATGAAATAACATTTGAAGAGAGGGATCCTTTATTCGTAGCTAAC
GTTGGTGATTATCATTCTAGTGCAGCAAAGGGAGGTTCAACTCGATGGGTTCGAGGAGGA
ACGTTTTAA