Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400024574
CDS Infomation

pacid=37462766 polypeptide=PGSC0003DMP400016806 locus=PGSC0003DMG400009500 ID=PGSC0003DMT400024574.v4.03 annot-version=v4.03
Sequence

ATGGCGTCTTCAGCTTCAACTACTAACCATCACGCGAAAATGTCTCTGCTAAATCGAAGG
TTTGTAGTTGTAGGCTTGATTGTTCTACTGATCTTTGCCGTATTCAGTGAAGCTGAAGCA
TCGTATGGAGCTTACAAAGTCAAAGTCATCAATGAATTCCCTCACGACCCCGAAGCCTAC
ACCCAGGGGCTTCTCTATGCAGAAAATGACACACTCTTTGAATCAACTGGACTTTACGGA
CGTTCATCTGTTCGGAAAGTTGCGTTGCAGAATGGTAAGGTTGAGACTGTTCATGAAATG
CAGGCTTCTGACTTTGGAGAGGGTTTAACTCTTCTTGGTGAGAGCTTGTTCCAACTAACA
TGGTTGCAGGATACTGGTTTCATATATGATCGATACAACTTTAGCAAATTCAAAAAGTTT
ACTCATCACATGCAAGATGGTTGGGGATTGGCAACTGATGGGAAAGTAATTTTTGGAAGT
GATGGAACATCAACATTATATAAGATTGACCCTAAGACAATGAAAGTCATCAGAAAACAA
GTTGTCAAGTCTCAAGGGCATGAAGTGCGCTACCTCAATGAGCTGGAGTATGTGAAAGAT
GAAGTATGGTCAAATGTCTATGGGACTGATTGCATTGCTAGAATTTCACCAAAAGATGGC
ACTGTGATCGGGTGGATTCTCCTTCAATCTCTAAGGGAAGATTTAAAATCAAGAGGCTAT
AAGTACTTTGAGGTCCTGAATGGAATCGCATGGGACAGAGACGGTGACCGTATTTTTGTG
ACAGGGAAACTATGGCCAAAGATATTCGAGATCAAGTTGCTCCCCCTCCCACCAAGTGCT
CCATTAATTGGAGAAATCAATAACTTGTGCACCCCAAAATTAAACCATTCTATCTTGGAA
ATTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400016806
PEP Infomation

pacid=37462766 transcript=PGSC0003DMT400024574 locus=PGSC0003DMG400009500 ID=PGSC0003DMT400024574.v4.03 annot-version=v4.03
Sequence

MASSASTTNHHAKMSLLNRRFVVVGLIVLLIFAVFSEAEASYGAYKVKVINEFPHDPEAY
TQGLLYAENDTLFESTGLYGRSSVRKVALQNGKVETVHEMQASDFGEGLTLLGESLFQLT
WLQDTGFIYDRYNFSKFKKFTHHMQDGWGLATDGKVIFGSDGTSTLYKIDPKTMKVIRKQ
VVKSQGHEVRYLNELEYVKDEVWSNVYGTDCIARISPKDGTVIGWILLQSLREDLKSRGY
KYFEVLNGIAWDRDGDRIFVTGKLWPKIFEIKLLPLPPSAPLIGEINNLCTPKLNHSILE
I*

Transcript Sequence

Transcript ID

PGSC0003DMT400024574
Transcript Infomation

pacid=37462766 locus=PGSC0003DMG400009500 ID=PGSC0003DMT400024574.v4.03 annot-version=v4.03
Sequence

ATGGCGTCTTCAGCTTCAACTACTAACCATCACGCGAAAATGTCTCTGCTAAATCGAAGG
TTTGTAGTTGTAGGCTTGATTGTTCTACTGATCTTTGCCGTATTCAGTGAAGCTGAAGCA
TCGTATGGAGCTTACAAAGTCAAAGTCATCAATGAATTCCCTCACGACCCCGAAGCCTAC
ACCCAGGGGCTTCTCTATGCAGAAAATGACACACTCTTTGAATCAACTGGACTTTACGGA
CGTTCATCTGTTCGGAAAGTTGCGTTGCAGAATGGTAAGGTTGAGACTGTTCATGAAATG
CAGGCTTCTGACTTTGGAGAGGGTTTAACTCTTCTTGGTGAGAGCTTGTTCCAACTAACA
TGGTTGCAGGATACTGGTTTCATATATGATCGATACAACTTTAGCAAATTCAAAAAGTTT
ACTCATCACATGCAAGATGGTTGGGGATTGGCAACTGATGGGAAAGTAATTTTTGGAAGT
GATGGAACATCAACATTATATAAGATTGACCCTAAGACAATGAAAGTCATCAGAAAACAA
GTTGTCAAGTCTCAAGGGCATGAAGTGCGCTACCTCAATGAGCTGGAGTATGTGAAAGAT
GAAGTATGGTCAAATGTCTATGGGACTGATTGCATTGCTAGAATTTCACCAAAAGATGGC
ACTGTGATCGGGTGGATTCTCCTTCAATCTCTAAGGGAAGATTTAAAATCAAGAGGCTAT
AAGTACTTTGAGGTCCTGAATGGAATCGCATGGGACAGAGACGGTGACCGTATTTTTGTG
ACAGGGAAACTATGGCCAAAGATATTCGAGATCAAGTTGCTCCCCCTCCCACCAAGTGCT
CCATTAATTGGAGAAATCAATAACTTGTGCACCCCAAAATTAAACCATTCTATCTTGGAA
ATTTAG