Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400024564
CDS Infomation

pacid=37462882 polypeptide=PGSC0003DMP400016799 locus=PGSC0003DMG400009496 ID=PGSC0003DMT400024564.v4.03 annot-version=v4.03
Sequence

ATGGCTGCAAATGATGTGCCATGTTGTGAAACTATGTTTTGGGTATACTTAATTATTTGT
GTATCACTTGTGTGTTTTGCTGGACTTATGTCTGGATTAACACTAGGACTCATGTCTCTT
AGCCTTATGGATCTTGAGATTCTTATTAAGGCGGGTCAGCCAAATGATCGAAAAAACGCG
GAGAAAATTTTGCCCATTGTGAAGAATCAGCACTTGCTCTTGTGCACCCTTCTAATATGT
AACGCGATGGCTATGGAGGCTCTTCCAATATTCCTAGATGCTTTACTTCCTGCATGGGGT
GCTATATTAATATCAGTCACCCTCATACTAGCCTTTGGAGAGATTATTCCTCAGTCCATC
TGTTCGCGCTATGGACTGAGCATTGGTGCAAGATTGGCACCTTTGGTTCGTTTACTCGTC
ATAGTTGTCTTCCCTTTATCTTACCCCATCAGTAAGTTGTTGGATTTACTCTTGGGGAAA
GGACACTCTGCACTTCTACGTCGCGCAGAGCTGAAAATGTTGGTGAATATGCATGGTAAT
GAGGCAGGGAAAGGCGGGGAGTTGAGCCACGATGAAACAACCATAATTGCTGGAGCATTG
GACCTAGCTCAGAAATCGGTTAAAGATTCAATGACTCCAATGTCCAGAGTCTTTTCCCTT
GATCTTCATTCTAAACTTACCGATGAGATGATGAATCTGATAATAAGCAAAGGCCATAGT
CGCGTACCTGTATACTCTGGTACTCCAACAAATATTGTAGGCCTGATCTTGGTGAAGAAT
TTGATAAAATGTCGTCCTGAAGATGAGGTGCCAATCAAAGATCTCACTATAAGGAGTATA
CCAAAAGTCCCAGATTCGTTACCATTATATGATCTTCTTAATCAGTTTGAGAAAGGCCAC
AGCCATATGGCTGTAGTGGTAAAGAGTAGAAGGATCACTAAGGAAACTGCAGAAAATGCC
ACTGCTAAACACGATATAATCAAGATAAATATCCTTCCGGCCAGTCCAATTCAACAGCTT
CATGCATTTGAAAAGGGAGAAGAAGCAATTGGTATCATTACAATGGAAGATGTCCTTGAA
CAACTTCTGCAGGAACCAATATACGACGAGACAGATGACTATGTTGATGTTCATAACAAA
ATTAGGATCAACATTCCTCCGTCGATGATATTTTCACCTAGAAGATCTCCAGGAGCAGTG
GCAACAGGGGCTACTAATTATAAACCGAAGTGGCAAAGTCCAATAGCGTCTCCAGTACAT
TCAAGTGCACATCAAAGTCCTATGTTGCGCTCACCTGTTTCACCATACGTGCAGTCGCCA
TATATTGTGCCAAAACTATCCCCTGCACACTTAAATAGTACAAATTCTCCAAGCAGATTT
TCACGCAGCTCTCCATCATCTAATGATCAGGTTTCTCTGAAATCTTATGAGAAGTTGGAC
AAACACGGACTTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400016799
PEP Infomation

pacid=37462882 transcript=PGSC0003DMT400024564 locus=PGSC0003DMG400009496 ID=PGSC0003DMT400024564.v4.03 annot-version=v4.03
Sequence

MAANDVPCCETMFWVYLIICVSLVCFAGLMSGLTLGLMSLSLMDLEILIKAGQPNDRKNA
EKILPIVKNQHLLLCTLLICNAMAMEALPIFLDALLPAWGAILISVTLILAFGEIIPQSI
CSRYGLSIGARLAPLVRLLVIVVFPLSYPISKLLDLLLGKGHSALLRRAELKMLVNMHGN
EAGKGGELSHDETTIIAGALDLAQKSVKDSMTPMSRVFSLDLHSKLTDEMMNLIISKGHS
RVPVYSGTPTNIVGLILVKNLIKCRPEDEVPIKDLTIRSIPKVPDSLPLYDLLNQFEKGH
SHMAVVVKSRRITKETAENATAKHDIIKINILPASPIQQLHAFEKGEEAIGIITMEDVLE
QLLQEPIYDETDDYVDVHNKIRINIPPSMIFSPRRSPGAVATGATNYKPKWQSPIASPVH
SSAHQSPMLRSPVSPYVQSPYIVPKLSPAHLNSTNSPSRFSRSSPSSNDQVSLKSYEKLD
KHGL*

Transcript Sequence

Transcript ID

PGSC0003DMT400024564
Transcript Infomation

pacid=37462882 locus=PGSC0003DMG400009496 ID=PGSC0003DMT400024564.v4.03 annot-version=v4.03
Sequence

ATGGCTGCAAATGATGTGCCATGTTGTGAAACTATGTTTTGGGTATACTTAATTATTTGT
GTATCACTTGTGTGTTTTGCTGGACTTATGTCTGGATTAACACTAGGACTCATGTCTCTT
AGCCTTATGGATCTTGAGATTCTTATTAAGGCGGGTCAGCCAAATGATCGAAAAAACGCG
GAGAAAATTTTGCCCATTGTGAAGAATCAGCACTTGCTCTTGTGCACCCTTCTAATATGT
AACGCGATGGCTATGGAGGCTCTTCCAATATTCCTAGATGCTTTACTTCCTGCATGGGGT
GCTATATTAATATCAGTCACCCTCATACTAGCCTTTGGAGAGATTATTCCTCAGTCCATC
TGTTCGCGCTATGGACTGAGCATTGGTGCAAGATTGGCACCTTTGGTTCGTTTACTCGTC
ATAGTTGTCTTCCCTTTATCTTACCCCATCAGTAAGTTGTTGGATTTACTCTTGGGGAAA
GGACACTCTGCACTTCTACGTCGCGCAGAGCTGAAAATGTTGGTGAATATGCATGGTAAT
GAGGCAGGGAAAGGCGGGGAGTTGAGCCACGATGAAACAACCATAATTGCTGGAGCATTG
GACCTAGCTCAGAAATCGGTTAAAGATTCAATGACTCCAATGTCCAGAGTCTTTTCCCTT
GATCTTCATTCTAAACTTACCGATGAGATGATGAATCTGATAATAAGCAAAGGCCATAGT
CGCGTACCTGTATACTCTGGTACTCCAACAAATATTGTAGGCCTGATCTTGGTGAAGAAT
TTGATAAAATGTCGTCCTGAAGATGAGGTGCCAATCAAAGATCTCACTATAAGGAGTATA
CCAAAAGTCCCAGATTCGTTACCATTATATGATCTTCTTAATCAGTTTGAGAAAGGCCAC
AGCCATATGGCTGTAGTGGTAAAGAGTAGAAGGATCACTAAGGAAACTGCAGAAAATGCC
ACTGCTAAACACGATATAATCAAGATAAATATCCTTCCGGCCAGTCCAATTCAACAGCTT
CATGCATTTGAAAAGGGAGAAGAAGCAATTGGTATCATTACAATGGAAGATGTCCTTGAA
CAACTTCTGCAGGAACCAATATACGACGAGACAGATGACTATGTTGATGTTCATAACAAA
ATTAGGATCAACATTCCTCCGTCGATGATATTTTCACCTAGAAGATCTCCAGGAGCAGTG
GCAACAGGGGCTACTAATTATAAACCGAAGTGGCAAAGTCCAATAGCGTCTCCAGTACAT
TCAAGTGCACATCAAAGTCCTATGTTGCGCTCACCTGTTTCACCATACGTGCAGTCGCCA
TATATTGTGCCAAAACTATCCCCTGCACACTTAAATAGTACAAATTCTCCAAGCAGATTT
TCACGCAGCTCTCCATCATCTAATGATCAGGTTTCTCTGAAATCTTATGAGAAGTTGGAC
AAACACGGACTTTAG