Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400024532
CDS Infomation

pacid=37475332 polypeptide=PGSC0003DMP400016778 locus=PGSC0003DMG400009484 ID=PGSC0003DMT400024532.v4.03 annot-version=v4.03
Sequence

ATGAAACTTCACATCTCAACTCTCATTACTACTATTCTCTTATGTCTATCATTCGTTTCG
ATTGTTGAATCAACTCAGCCACCCTTCTCTTGTGATTCGTCGAATCCACAAACCAAATCG
TTAAAATTTTGCCAAACAGGACTTCCAATTAGTGTACGTGTACAAGACCTTGTTTCTCGA
CTCACACTCGATGAAAAAATATCTCAACTAGTTAACTCAGCCCCTGCTATACCCAGACTC
GGTATTCCGGCGTATGAGTGGTGGTCGGAGTCGTTACACGGCGTTGGTTCTGCCGGAAAA
GGTATTTTCTTCAATGGGAGTATTGCCGGAGCCACCAGTTTTCCCCAAGTTATCCTCACT
GCTGCTACTTTTGATGAAAATCTATGGTACCGCATTGGTCAGGTGATTGGAGTAGAGGCA
AGGGGAGTATACAATGCAGGTCAAGCAATAGGTATGACATTTTGGGCACCAAATATAAAT
ATATTTAGGGACCCAAGATGGGGAAGAGGTCAAGAGACACCAGGGGAGGACCCAATAATG
ACTGGCAAATATGCAATTAGGTATGTGAGAGGAGTACAAGGTGACAGCTTTAATGGTGGA
CAACTTAAAAAAGGTCACCTTCAAGCTTCTGCTTGCTGCAAACATTTCACTGCTTATGAT
TTGGATCAATGGAAAAACTTGGATCGATTTAGCTTCAATGCCATTGTTACCCCTCAAGAT
ATGGCAGATACATTTCAGCCCCCTTTCCAAGATTGTATACAGAAAGCACAAGCCAGTGGA
ATTATGTGCTCTTACAATAGTGTTAATGGAATCCCAAGTTGTGCTAATTATAATCTTTTG
ACTAAAACAGCTCGTCAACAATGGGGTTTTCATGGGTACATTACATCCGATTGTGATGCA
GTTCAAGTCATGCATGATAATCACAGGTATGGAAATACACCAGAAGATTCAACAGCATTT
GCACTTAAAGCTGGCATGGATATAGACTGTGGGGATTACTTGAAGAAATACACAAAATCA
GCAGTAATGAAGAAAAAAGTATCACAAGTTCATATAGACAGGGCTCTTCACAATCTTTTC
TCCATAAGAATGAGGTTAGGATTATTCAATGGGGATCCCAGAAAACAGCTCTATGGAAAC
ATTAGTCCTAGCCTGGTTTGTGCTCCACAACACCAAGAACTAGCCCTTGAAGCTGCAAGA
AATGGCATTGTCTTGCTCAAGAATACCGGCAAGTTGCTTCCTCTTTCCAAGGCGAAAACC
AACTCCCTTGCTGTCATTGGACATAATGCCAACAATGCTTATATTCTTCGTGGGAACTAT
GATGGTCCTCCTTGCAAATATATCGAAATTCTCAAGGCGTTGGTTGGTTATGCGAAGTCA
GTGCAGTACCAACAGGGTTGCAATGCGGCTAACTGCACGTCTGCTGACATTAATCAAGCT
GTCAACATTGCAACAAATGCAGATTATGTTGTTTTAGTCATGGGGTTGGATCAAACTCAA
GAGAGGGAACAGTTTGATCGCGATGACTTAGTGCTCCCGGGGCAGCAAGAAAATCTCATT
AATAGTGTTGCTAAAGCTGCAAAGAAGCCTGTTATATTGGTGATCCTTTCAGGAGGTCCA
GTCGATATTTCTTTCGCAAAATATAACCCCAAAATAGGAAGCATATTGTGGGCTGGCTAT
CCTGGTGAAGCTGGAGGAATTGCTTTAGCTGAAATCATATTTGGTGAACATAATCCTGGG
GGTAAATTACCTGTTACATGGTATCCTCAAGCCTTTGTCAAAATACCAATGACAGACATG
AGGATGAGACCTGATCCAAAAACAGGTTACCCTGGTAGAACATATCGATTCTACAAAGGT
CCCAAAGTTTACGAGTTTGGATATGGTCTTAGCTACACAACTTATTCCTATGGATTCCAC
TCTGCCACTCCAAACACAGTCCAGTTAAATCAGTTATCATCTGTAAAGACAGTTGAAAAT
TCAGACTCAATCCGTTACACGTCTGTGGATGAAATAGGAAGTGACAACTGTGAGAAGGCG
AAATTCTCAGCTCATGTTAGTGTGGAAAACTCAGGGGAAATGGATGGTAAGCATCCAGTA
CTACTTTTTGTGAAACAGGACAAAGCGCGAAATGGAAGACCTATCAAACAGTTAGTTGGA
TTCCAAAGTGTAAGCTTGAAGGCAGGGGAAGATTCACAACTTGTGTTTGAGATCAGTCCT
TGTGAACATCTTAGCAGTGCTAATGAAGATGGATTAATGATGATAGAAGAAGGATCGCGT
TACCTTGTCGTTGGAGATGCAGAGCATCCTATTAACATCATGATGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400016778
PEP Infomation

pacid=37475332 transcript=PGSC0003DMT400024532 locus=PGSC0003DMG400009484 ID=PGSC0003DMT400024532.v4.03 annot-version=v4.03
Sequence

MKLHISTLITTILLCLSFVSIVESTQPPFSCDSSNPQTKSLKFCQTGLPISVRVQDLVSR
LTLDEKISQLVNSAPAIPRLGIPAYEWWSESLHGVGSAGKGIFFNGSIAGATSFPQVILT
AATFDENLWYRIGQVIGVEARGVYNAGQAIGMTFWAPNINIFRDPRWGRGQETPGEDPIM
TGKYAIRYVRGVQGDSFNGGQLKKGHLQASACCKHFTAYDLDQWKNLDRFSFNAIVTPQD
MADTFQPPFQDCIQKAQASGIMCSYNSVNGIPSCANYNLLTKTARQQWGFHGYITSDCDA
VQVMHDNHRYGNTPEDSTAFALKAGMDIDCGDYLKKYTKSAVMKKKVSQVHIDRALHNLF
SIRMRLGLFNGDPRKQLYGNISPSLVCAPQHQELALEAARNGIVLLKNTGKLLPLSKAKT
NSLAVIGHNANNAYILRGNYDGPPCKYIEILKALVGYAKSVQYQQGCNAANCTSADINQA
VNIATNADYVVLVMGLDQTQEREQFDRDDLVLPGQQENLINSVAKAAKKPVILVILSGGP
VDISFAKYNPKIGSILWAGYPGEAGGIALAEIIFGEHNPGGKLPVTWYPQAFVKIPMTDM
RMRPDPKTGYPGRTYRFYKGPKVYEFGYGLSYTTYSYGFHSATPNTVQLNQLSSVKTVEN
SDSIRYTSVDEIGSDNCEKAKFSAHVSVENSGEMDGKHPVLLFVKQDKARNGRPIKQLVG
FQSVSLKAGEDSQLVFEISPCEHLSSANEDGLMMIEEGSRYLVVGDAEHPINIMM*

Transcript Sequence

Transcript ID

PGSC0003DMT400024532
Transcript Infomation

pacid=37475332 locus=PGSC0003DMG400009484 ID=PGSC0003DMT400024532.v4.03 annot-version=v4.03
Sequence

ATGAAACTTCACATCTCAACTCTCATTACTACTATTCTCTTATGTCTATCATTCGTTTCG
ATTGTTGAATCAACTCAGCCACCCTTCTCTTGTGATTCGTCGAATCCACAAACCAAATCG
TTAAAATTTTGCCAAACAGGACTTCCAATTAGTGTACGTGTACAAGACCTTGTTTCTCGA
CTCACACTCGATGAAAAAATATCTCAACTAGTTAACTCAGCCCCTGCTATACCCAGACTC
GGTATTCCGGCGTATGAGTGGTGGTCGGAGTCGTTACACGGCGTTGGTTCTGCCGGAAAA
GGTATTTTCTTCAATGGGAGTATTGCCGGAGCCACCAGTTTTCCCCAAGTTATCCTCACT
GCTGCTACTTTTGATGAAAATCTATGGTACCGCATTGGTCAGGTGATTGGAGTAGAGGCA
AGGGGAGTATACAATGCAGGTCAAGCAATAGGTATGACATTTTGGGCACCAAATATAAAT
ATATTTAGGGACCCAAGATGGGGAAGAGGTCAAGAGACACCAGGGGAGGACCCAATAATG
ACTGGCAAATATGCAATTAGGTATGTGAGAGGAGTACAAGGTGACAGCTTTAATGGTGGA
CAACTTAAAAAAGGTCACCTTCAAGCTTCTGCTTGCTGCAAACATTTCACTGCTTATGAT
TTGGATCAATGGAAAAACTTGGATCGATTTAGCTTCAATGCCATTGTTACCCCTCAAGAT
ATGGCAGATACATTTCAGCCCCCTTTCCAAGATTGTATACAGAAAGCACAAGCCAGTGGA
ATTATGTGCTCTTACAATAGTGTTAATGGAATCCCAAGTTGTGCTAATTATAATCTTTTG
ACTAAAACAGCTCGTCAACAATGGGGTTTTCATGGGTACATTACATCCGATTGTGATGCA
GTTCAAGTCATGCATGATAATCACAGGTATGGAAATACACCAGAAGATTCAACAGCATTT
GCACTTAAAGCTGGCATGGATATAGACTGTGGGGATTACTTGAAGAAATACACAAAATCA
GCAGTAATGAAGAAAAAAGTATCACAAGTTCATATAGACAGGGCTCTTCACAATCTTTTC
TCCATAAGAATGAGGTTAGGATTATTCAATGGGGATCCCAGAAAACAGCTCTATGGAAAC
ATTAGTCCTAGCCTGGTTTGTGCTCCACAACACCAAGAACTAGCCCTTGAAGCTGCAAGA
AATGGCATTGTCTTGCTCAAGAATACCGGCAAGTTGCTTCCTCTTTCCAAGGCGAAAACC
AACTCCCTTGCTGTCATTGGACATAATGCCAACAATGCTTATATTCTTCGTGGGAACTAT
GATGGTCCTCCTTGCAAATATATCGAAATTCTCAAGGCGTTGGTTGGTTATGCGAAGTCA
GTGCAGTACCAACAGGGTTGCAATGCGGCTAACTGCACGTCTGCTGACATTAATCAAGCT
GTCAACATTGCAACAAATGCAGATTATGTTGTTTTAGTCATGGGGTTGGATCAAACTCAA
GAGAGGGAACAGTTTGATCGCGATGACTTAGTGCTCCCGGGGCAGCAAGAAAATCTCATT
AATAGTGTTGCTAAAGCTGCAAAGAAGCCTGTTATATTGGTGATCCTTTCAGGAGGTCCA
GTCGATATTTCTTTCGCAAAATATAACCCCAAAATAGGAAGCATATTGTGGGCTGGCTAT
CCTGGTGAAGCTGGAGGAATTGCTTTAGCTGAAATCATATTTGGTGAACATAATCCTGGG
GGTAAATTACCTGTTACATGGTATCCTCAAGCCTTTGTCAAAATACCAATGACAGACATG
AGGATGAGACCTGATCCAAAAACAGGTTACCCTGGTAGAACATATCGATTCTACAAAGGT
CCCAAAGTTTACGAGTTTGGATATGGTCTTAGCTACACAACTTATTCCTATGGATTCCAC
TCTGCCACTCCAAACACAGTCCAGTTAAATCAGTTATCATCTGTAAAGACAGTTGAAAAT
TCAGACTCAATCCGTTACACGTCTGTGGATGAAATAGGAAGTGACAACTGTGAGAAGGCG
AAATTCTCAGCTCATGTTAGTGTGGAAAACTCAGGGGAAATGGATGGTAAGCATCCAGTA
CTACTTTTTGTGAAACAGGACAAAGCGCGAAATGGAAGACCTATCAAACAGTTAGTTGGA
TTCCAAAGTGTAAGCTTGAAGGCAGGGGAAGATTCACAACTTGTGTTTGAGATCAGTCCT
TGTGAACATCTTAGCAGTGCTAATGAAGATGGATTAATGATGATAGAAGAAGGATCGCGT
TACCTTGTCGTTGGAGATGCAGAGCATCCTATTAACATCATGATGTGA