Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400024531
CDS Infomation

pacid=37471491 polypeptide=PGSC0003DMP400016777 locus=PGSC0003DMG400009483 ID=PGSC0003DMT400024531.v4.03 annot-version=v4.03
Sequence

ATGGGTTCTAAAGGAAGGGCGTTGTTTGATCTTAATGAACCCCCTGCTGAGGATGAGCAG
GTTAATGATGGTGTCCTCTGTTTACAGCCTCAGAGAGCAGTTCCCTCTTCTAGTACCAAC
ACTTCTGAGTTTTTGGCATCTTCTGTTGATCCTCCGGGGATAGTAAACAATCATGCATTT
TCCCATGCCTCTTCCGTTTCAGGTTTTCAGCCCTTTGTTCGGTCAAAAGGTGCAGAGGCA
TCTAGAGCTCCCGAGGAACATGGGAGTGGTGGCCCCTCAACTTCGGGTGGTGCTTCATTA
TCTAAATCAAGTCAGGAACATACAATGAAGTCTTTGATCCAGCCAGATCTTAACTCTCTT
GATATGCAAGTGACTGAAAAGGAAGAAGGTGAATGGTCTGATGCAGAGGGTTCAACATAT
GCGGATAAAAATTGTGGCTTGAATGATAAGTCGAATACTGATGTTGATAAAGCTTCGCAG
GAGAAATCAGCAGTTGAGCCGGTGAGCAATAGTGATAAAGTTGGCTCTGTTGATAATGCT
TCTCAGGATAACGAGAAAGGGAATGGTGAAAATTACAATATTTCTTCTTTAGAATTAGAT
CGTGATACAAGTGACAGGAAAAGCAATAGTAGCAGAAATTCTGAAACCAGTAGTAAAGCT
GATATCACCATGGACGGTCAGGAGGATTCTGGGCAGGTGCCAAAGCATAGAGAGATTAGA
GGTGTTGAGGCAAGTCATGCATTGAAGTGTGCTAACAATTTTGGTAAGCGTCCTAAGGTT
GACCAGCAGAAGGAAATGATGCTGGGAAAGAAGCGCAGTAGGCAGACCATGTTTCTTGAT
TTGGAAGATGTTAAACAGGCAGGTTCTCAAAAAAGTATTGCTAGGCGCCAAAATTTCCCA
GCACCTGTTACAACTCGCATTGTGAAAGAGTCTCGTAATGTTCCTTCGCCTTCTGAAAAG
AATGGGGAAAAGCAGAGTCAGGTACTTGTCAAAGATATGAAACAAATTGATTCGACTAAT
GAAGGAAACTTGCCTATGGAATCTAATGATTCTAGATCTGAATCCAGTGCTGATGTGAAC
CTAGCACCTCTAGGTCGACCAAGACGATTGAATAGTGCTACTGACCTCACGTCTGAGGCT
CAAACACCACCTATACCTAGACAGAGTTCTTGGAAACATCCCACAGATCAGAGGCAAAAT
AGAAATTCACAGTTTCCTGGTAGGAAGCCTGCTCTGACCAGTCAAAATTCCATGGAACCA
AAATTGGGAGCCAAAAAACCTCCATCCAAGAAGCAACCTATAGTAAGTAGCCTGTGCCAA
GATACATCTGTAGAACGCCTTATTCGTGAGGTGACAAACGAGAAGTTTTGGCAACATCCA
GATGAAGCGGAGCTTCAGTGTGTACCTGGTCAGTTTGAATCTGTGGAAGAGTATGTTAAG
GTGTTTGAACCCTTGCTCTTTGAGGAATGCCGGGCACAGCTGTACAGTACTTGGGAGGAG
ATGGCTGACACAGGAACCCATGTGAGGGTCCATATTAAAAATATTGAACGGCGAGAAAGA
GGATGGTATGATGTAATCCTTTTTCCAGATTGTGAGTGGAAGTGGTTATTCAAAGAGGGA
GATGTAGCAGTTCTCTCCACTCCACGTCCTGGATCAGCAGTCCGATCACGGAGAAGTGGC
ACCTCAACATTCGGGGATGGTGATGAGCCTGAAATTAGTGGTCGTGTGGCTGGTACTGTG
AGGCGACACATACCTATTGATACTCGAGACCCTGCCGGAGCCATCCTGCACTTCTATGTT
GGAGATCCGTATGACACCAACAGCAATATTGGTAGTGATCACATACTGCGGAAACTGCAA
CCAAGAGGCATCTGGTTTCTGACTGTTCTGGGTTCTCTAGCTACCACCCAACGAGAATAT
GTAGCTTTACATGCATTTCGGCGTCTCAATCTACAGATGCAAAATGCAATTCTTCAGCCA
AGTCCGGAGCACTTCCCTAAGTATGAAGAGCAGACACCGGCAATGCCTGACTGCTTTACA
CCAAACTTTACTGACCACTTGCACAGGACCTTTAATGAACCACAGTTAGCAGCAATCCAG
TGGGCTGCAACGCATACAGCTGCTGGAACTAATGGTATGACAAAGAGGCAAGATCCATGG
CCTTTTACTCTAGTTCAAGGGCCACCTGGTACAGGTAAAACACACACAGTGTGGGGAATG
CTGAATGTTATCCATCTTGTTCAGTATCAGCACTATTACACAGCATTGCTCAAGAAACTA
GCTCCTGAAAGCTATAAGCAGAATAACGAGAATAACTCCGATAATGTTGTTACTGGATCC
ATTGATGAAGTCCTGCTAAGCATGGATCAGAATCTCTTCAGAACCCTCCCAAAGCTATGT
CCAAAACCTAGAATGCTTGTCTGTGCTCCTTCAAATGCTGCAACTGACGAGCTTCTTGCA
CGTGTTCTTGATCGTGGATTCATTGACGGTGAGATGAAAGTTTATCGACCTGATGTTGCA
CGAGTTGGGGTGGATTCCCAAACGCGTGCCGCCCAAGCAGTTTCTGTGGAGCGGAGAACT
GAACAGCTTTTGATGAAGAGTCGTGATGAAGTTTATGGGTGGATGCACCAGTTGAGAGCT
CGTGAAGCTCAGTTGTCGCAGCAGATAGCTGGCCTTCAAAGAGAACTAACAGTTGCTGCA
GCTGCTGGTCGTGCACAGGGATCTGTTGGAGTTGACCCTGATGTTCTTATGGCTAGGGAC
CAAAATCGAGATACTCTATTGCAGAACCTTGCGGCAGTGGTTGAGAATAGAGATAAAATA
CTGGTGGAGATGTCCCGCCTTCTGATTTTAGAGAGTAGGTTCCGTGGTGGTAACAATTTC
AACATGGAGGAAGCTCGTGCTAGTCTGGAGGCTAGTTTTGCCAATGAAGCTGAAATTGTT
TTCACTACTGTTTCAAGTAGTGGGAGAAAATTATTCTCTCGTCTTACCCATGGTTTTGAC
ATGGTAGTCATTGATGAAGCAGCCCAGGCCAGTGAAGTAGGAGTCCTTCCTCCTCTTTCT
CTTGGTGCAGCACGATGTGTTCTTGTTGGGGATCCGCAGCAGCTTCCTGCTACGGTTATC
AGCAAAGCAGCTGGAACTTTGATGTACAGTAGAAGCCTCTTTGAGAGGTTTCAGCAAGCA
GGCTGCCCAACTATGTTGTTATCAGTGCAGTACAGGATGCACCCACAAATTAGGGATTTT
CCTTCTAGGTACTTTTATCAAGGCCGCCTTAGTGATAGTGAAAGTGTTGTGAATCTGCCT
GACGAAGTTTACTACAAGGAGCCTTTACTGAAGCCTTACATCTTTTATGACATTACACAT
GGTCGGGAATCTCATAGAGGTGGATCTGTTTCATATCAGAATACACATGAAGCACAGTTC
TGTCTTCGTTTGTATGAGCATCTTCAAAAGACTTGTAAATCTCTTGGTGTTGGGAAGGTT
ACTGTAGGTATAATCACTCCATACAAGCTGCAACTTAAATGCCTCCAAAGGGAGTTCGGG
GATGTTTTAAATTCTGAAGAAGGAAAGGACATTTACATAAATACTGTGGATGCTTTCCAG
GGTCAAGAGCGTGATGTTATTATAATGTCATGTGTGCGTGCCTCAGGTCATGGGGTTGGG
TTTGTTGCAGATATACGGCGAATGAATGTTGCTCTTACTCGTGCAAGACGAGCTCTTTGG
GTAATGGGTAATGCCAATGCTCTGGTGCAATCAGAAGATTGGGCTGCATTGATTGCTGAT
GCCAAAACCAGAAAATGTTACATGGACATGGATACTTTGCCTAAGGACTTCTTGCTACCC
AAGGCAGCTTCTCATGCTCCTCCACCGACCAATATGTCTAATAATCGAGGTTTAAGATCT
GGGTTACGACATAGAATATATGATCCACACATGGAGCCCAGGTCAGGAACACCTTCAGAA
GATGATGAAAAACCAAATGCATTACATGTAAGGAATGGAAGTTATAGGCCTCCTAAGCCA
TCACTGGACAATTCGTTGAATGATTTTGATCAACCTGCTGATAGATCTAGAGATGCCTGG
CAAAATGGTATACAGAGGAGGCAAAATACAGCTGGAATTGGGAGAAGAGACCTGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400016777
PEP Infomation

pacid=37471491 transcript=PGSC0003DMT400024531 locus=PGSC0003DMG400009483 ID=PGSC0003DMT400024531.v4.03 annot-version=v4.03
Sequence

MGSKGRALFDLNEPPAEDEQVNDGVLCLQPQRAVPSSSTNTSEFLASSVDPPGIVNNHAF
SHASSVSGFQPFVRSKGAEASRAPEEHGSGGPSTSGGASLSKSSQEHTMKSLIQPDLNSL
DMQVTEKEEGEWSDAEGSTYADKNCGLNDKSNTDVDKASQEKSAVEPVSNSDKVGSVDNA
SQDNEKGNGENYNISSLELDRDTSDRKSNSSRNSETSSKADITMDGQEDSGQVPKHREIR
GVEASHALKCANNFGKRPKVDQQKEMMLGKKRSRQTMFLDLEDVKQAGSQKSIARRQNFP
APVTTRIVKESRNVPSPSEKNGEKQSQVLVKDMKQIDSTNEGNLPMESNDSRSESSADVN
LAPLGRPRRLNSATDLTSEAQTPPIPRQSSWKHPTDQRQNRNSQFPGRKPALTSQNSMEP
KLGAKKPPSKKQPIVSSLCQDTSVERLIREVTNEKFWQHPDEAELQCVPGQFESVEEYVK
VFEPLLFEECRAQLYSTWEEMADTGTHVRVHIKNIERRERGWYDVILFPDCEWKWLFKEG
DVAVLSTPRPGSAVRSRRSGTSTFGDGDEPEISGRVAGTVRRHIPIDTRDPAGAILHFYV
GDPYDTNSNIGSDHILRKLQPRGIWFLTVLGSLATTQREYVALHAFRRLNLQMQNAILQP
SPEHFPKYEEQTPAMPDCFTPNFTDHLHRTFNEPQLAAIQWAATHTAAGTNGMTKRQDPW
PFTLVQGPPGTGKTHTVWGMLNVIHLVQYQHYYTALLKKLAPESYKQNNENNSDNVVTGS
IDEVLLSMDQNLFRTLPKLCPKPRMLVCAPSNAATDELLARVLDRGFIDGEMKVYRPDVA
RVGVDSQTRAAQAVSVERRTEQLLMKSRDEVYGWMHQLRAREAQLSQQIAGLQRELTVAA
AAGRAQGSVGVDPDVLMARDQNRDTLLQNLAAVVENRDKILVEMSRLLILESRFRGGNNF
NMEEARASLEASFANEAEIVFTTVSSSGRKLFSRLTHGFDMVVIDEAAQASEVGVLPPLS
LGAARCVLVGDPQQLPATVISKAAGTLMYSRSLFERFQQAGCPTMLLSVQYRMHPQIRDF
PSRYFYQGRLSDSESVVNLPDEVYYKEPLLKPYIFYDITHGRESHRGGSVSYQNTHEAQF
CLRLYEHLQKTCKSLGVGKVTVGIITPYKLQLKCLQREFGDVLNSEEGKDIYINTVDAFQ
GQERDVIIMSCVRASGHGVGFVADIRRMNVALTRARRALWVMGNANALVQSEDWAALIAD
AKTRKCYMDMDTLPKDFLLPKAASHAPPPTNMSNNRGLRSGLRHRIYDPHMEPRSGTPSE
DDEKPNALHVRNGSYRPPKPSLDNSLNDFDQPADRSRDAWQNGIQRRQNTAGIGRRDL*

Transcript Sequence

Transcript ID

PGSC0003DMT400024531
Transcript Infomation

pacid=37471491 locus=PGSC0003DMG400009483 ID=PGSC0003DMT400024531.v4.03 annot-version=v4.03
Sequence

ATGGGTTCTAAAGGAAGGGCGTTGTTTGATCTTAATGAACCCCCTGCTGAGGATGAGCAG
GTTAATGATGGTGTCCTCTGTTTACAGCCTCAGAGAGCAGTTCCCTCTTCTAGTACCAAC
ACTTCTGAGTTTTTGGCATCTTCTGTTGATCCTCCGGGGATAGTAAACAATCATGCATTT
TCCCATGCCTCTTCCGTTTCAGGTTTTCAGCCCTTTGTTCGGTCAAAAGGTGCAGAGGCA
TCTAGAGCTCCCGAGGAACATGGGAGTGGTGGCCCCTCAACTTCGGGTGGTGCTTCATTA
TCTAAATCAAGTCAGGAACATACAATGAAGTCTTTGATCCAGCCAGATCTTAACTCTCTT
GATATGCAAGTGACTGAAAAGGAAGAAGGTGAATGGTCTGATGCAGAGGGTTCAACATAT
GCGGATAAAAATTGTGGCTTGAATGATAAGTCGAATACTGATGTTGATAAAGCTTCGCAG
GAGAAATCAGCAGTTGAGCCGGTGAGCAATAGTGATAAAGTTGGCTCTGTTGATAATGCT
TCTCAGGATAACGAGAAAGGGAATGGTGAAAATTACAATATTTCTTCTTTAGAATTAGAT
CGTGATACAAGTGACAGGAAAAGCAATAGTAGCAGAAATTCTGAAACCAGTAGTAAAGCT
GATATCACCATGGACGGTCAGGAGGATTCTGGGCAGGTGCCAAAGCATAGAGAGATTAGA
GGTGTTGAGGCAAGTCATGCATTGAAGTGTGCTAACAATTTTGGTAAGCGTCCTAAGGTT
GACCAGCAGAAGGAAATGATGCTGGGAAAGAAGCGCAGTAGGCAGACCATGTTTCTTGAT
TTGGAAGATGTTAAACAGGCAGGTTCTCAAAAAAGTATTGCTAGGCGCCAAAATTTCCCA
GCACCTGTTACAACTCGCATTGTGAAAGAGTCTCGTAATGTTCCTTCGCCTTCTGAAAAG
AATGGGGAAAAGCAGAGTCAGGTACTTGTCAAAGATATGAAACAAATTGATTCGACTAAT
GAAGGAAACTTGCCTATGGAATCTAATGATTCTAGATCTGAATCCAGTGCTGATGTGAAC
CTAGCACCTCTAGGTCGACCAAGACGATTGAATAGTGCTACTGACCTCACGTCTGAGGCT
CAAACACCACCTATACCTAGACAGAGTTCTTGGAAACATCCCACAGATCAGAGGCAAAAT
AGAAATTCACAGTTTCCTGGTAGGAAGCCTGCTCTGACCAGTCAAAATTCCATGGAACCA
AAATTGGGAGCCAAAAAACCTCCATCCAAGAAGCAACCTATAGTAAGTAGCCTGTGCCAA
GATACATCTGTAGAACGCCTTATTCGTGAGGTGACAAACGAGAAGTTTTGGCAACATCCA
GATGAAGCGGAGCTTCAGTGTGTACCTGGTCAGTTTGAATCTGTGGAAGAGTATGTTAAG
GTGTTTGAACCCTTGCTCTTTGAGGAATGCCGGGCACAGCTGTACAGTACTTGGGAGGAG
ATGGCTGACACAGGAACCCATGTGAGGGTCCATATTAAAAATATTGAACGGCGAGAAAGA
GGATGGTATGATGTAATCCTTTTTCCAGATTGTGAGTGGAAGTGGTTATTCAAAGAGGGA
GATGTAGCAGTTCTCTCCACTCCACGTCCTGGATCAGCAGTCCGATCACGGAGAAGTGGC
ACCTCAACATTCGGGGATGGTGATGAGCCTGAAATTAGTGGTCGTGTGGCTGGTACTGTG
AGGCGACACATACCTATTGATACTCGAGACCCTGCCGGAGCCATCCTGCACTTCTATGTT
GGAGATCCGTATGACACCAACAGCAATATTGGTAGTGATCACATACTGCGGAAACTGCAA
CCAAGAGGCATCTGGTTTCTGACTGTTCTGGGTTCTCTAGCTACCACCCAACGAGAATAT
GTAGCTTTACATGCATTTCGGCGTCTCAATCTACAGATGCAAAATGCAATTCTTCAGCCA
AGTCCGGAGCACTTCCCTAAGTATGAAGAGCAGACACCGGCAATGCCTGACTGCTTTACA
CCAAACTTTACTGACCACTTGCACAGGACCTTTAATGAACCACAGTTAGCAGCAATCCAG
TGGGCTGCAACGCATACAGCTGCTGGAACTAATGGTATGACAAAGAGGCAAGATCCATGG
CCTTTTACTCTAGTTCAAGGGCCACCTGGTACAGGTAAAACACACACAGTGTGGGGAATG
CTGAATGTTATCCATCTTGTTCAGTATCAGCACTATTACACAGCATTGCTCAAGAAACTA
GCTCCTGAAAGCTATAAGCAGAATAACGAGAATAACTCCGATAATGTTGTTACTGGATCC
ATTGATGAAGTCCTGCTAAGCATGGATCAGAATCTCTTCAGAACCCTCCCAAAGCTATGT
CCAAAACCTAGAATGCTTGTCTGTGCTCCTTCAAATGCTGCAACTGACGAGCTTCTTGCA
CGTGTTCTTGATCGTGGATTCATTGACGGTGAGATGAAAGTTTATCGACCTGATGTTGCA
CGAGTTGGGGTGGATTCCCAAACGCGTGCCGCCCAAGCAGTTTCTGTGGAGCGGAGAACT
GAACAGCTTTTGATGAAGAGTCGTGATGAAGTTTATGGGTGGATGCACCAGTTGAGAGCT
CGTGAAGCTCAGTTGTCGCAGCAGATAGCTGGCCTTCAAAGAGAACTAACAGTTGCTGCA
GCTGCTGGTCGTGCACAGGGATCTGTTGGAGTTGACCCTGATGTTCTTATGGCTAGGGAC
CAAAATCGAGATACTCTATTGCAGAACCTTGCGGCAGTGGTTGAGAATAGAGATAAAATA
CTGGTGGAGATGTCCCGCCTTCTGATTTTAGAGAGTAGGTTCCGTGGTGGTAACAATTTC
AACATGGAGGAAGCTCGTGCTAGTCTGGAGGCTAGTTTTGCCAATGAAGCTGAAATTGTT
TTCACTACTGTTTCAAGTAGTGGGAGAAAATTATTCTCTCGTCTTACCCATGGTTTTGAC
ATGGTAGTCATTGATGAAGCAGCCCAGGCCAGTGAAGTAGGAGTCCTTCCTCCTCTTTCT
CTTGGTGCAGCACGATGTGTTCTTGTTGGGGATCCGCAGCAGCTTCCTGCTACGGTTATC
AGCAAAGCAGCTGGAACTTTGATGTACAGTAGAAGCCTCTTTGAGAGGTTTCAGCAAGCA
GGCTGCCCAACTATGTTGTTATCAGTGCAGTACAGGATGCACCCACAAATTAGGGATTTT
CCTTCTAGGTACTTTTATCAAGGCCGCCTTAGTGATAGTGAAAGTGTTGTGAATCTGCCT
GACGAAGTTTACTACAAGGAGCCTTTACTGAAGCCTTACATCTTTTATGACATTACACAT
GGTCGGGAATCTCATAGAGGTGGATCTGTTTCATATCAGAATACACATGAAGCACAGTTC
TGTCTTCGTTTGTATGAGCATCTTCAAAAGACTTGTAAATCTCTTGGTGTTGGGAAGGTT
ACTGTAGGTATAATCACTCCATACAAGCTGCAACTTAAATGCCTCCAAAGGGAGTTCGGG
GATGTTTTAAATTCTGAAGAAGGAAAGGACATTTACATAAATACTGTGGATGCTTTCCAG
GGTCAAGAGCGTGATGTTATTATAATGTCATGTGTGCGTGCCTCAGGTCATGGGGTTGGG
TTTGTTGCAGATATACGGCGAATGAATGTTGCTCTTACTCGTGCAAGACGAGCTCTTTGG
GTAATGGGTAATGCCAATGCTCTGGTGCAATCAGAAGATTGGGCTGCATTGATTGCTGAT
GCCAAAACCAGAAAATGTTACATGGACATGGATACTTTGCCTAAGGACTTCTTGCTACCC
AAGGCAGCTTCTCATGCTCCTCCACCGACCAATATGTCTAATAATCGAGGTTTAAGATCT
GGGTTACGACATAGAATATATGATCCACACATGGAGCCCAGGTCAGGAACACCTTCAGAA
GATGATGAAAAACCAAATGCATTACATGTAAGGAATGGAAGTTATAGGCCTCCTAAGCCA
TCACTGGACAATTCGTTGAATGATTTTGATCAACCTGCTGATAGATCTAGAGATGCCTGG
CAAAATGGTATACAGAGGAGGCAAAATACAGCTGGAATTGGGAGAAGAGACCTGTAG