Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400024482
CDS Infomation

pacid=37473401 polypeptide=PGSC0003DMP400016738 locus=PGSC0003DMG400009468 ID=PGSC0003DMT400024482.v4.03 annot-version=v4.03
Sequence

ATGGGTCTATCTAGCGTTGAGGCAATAAACGCAAAAGAAATGGACTACCGAAGTTTGTCA
TCCTCGGAGCACCAACAACCACCATATATGCACAAGGTTGGAGTCCCACCGAAACAGAAC
CTATTCGATGAATTTAAGACTACTGTAAAGGAAACATTGTTTTCAGATGATCCTCTACGC
CCCTTTAAGGATCAACCAAGGTCTCGGAAGTTTATCCTTGGTTTGCAGGCTGTATTTCCC
ATACTAGATTGGGGTAAAAGCTATAATGTTTCCAAATTCAGAGGTGATGTTATTGCTGGT
CTGACTATTGCAAGTCTCTGCATTCCTCAGGACATTGGATATGCAAAACTCGCAAACTTA
GCTCCTCAGTATGGGCTATACTCCAGCTTTGTTCCACCTTTGGTTTATTCCTTCATGGGT
AGCTCGAGAGATATAGCGATAGGACCTGTTGCTGTTGTATCACTATTGCTAGGGTCTCTC
CTAAGCAGTGAAATCGATCCAACGACAAATCCAATTGAATACCGGAGGCTTGCATTTACA
GCTACCTTTTTTGCTGGCATTACCCAAGCTACTCTTGGAATCCTAAGATTGGGATTTTTA
ATAGACTTCCTATCACATGCTGCTATTGTTGGTTTCATGGGTGGTGCGGCCATTACAATT
GCGCTTCAGCAACTTAAAGGTTTTCTGGGCATCAAGAAGTTTACTAAGGAAACTGATATC
ATTTCAGTGATGAAATCAGTATGCCGTTCAGCCCAGCATGGATGGAACTGGCCAACGATT
CTCATTGGAGCAATCTTTTTAACTTTCCTTTTGTTCGCGAAGTACGCTGGAAAGAAGAAC
AAAAAGCTCTTTTGGATACCTGCAATTGCTCCTCTGATCTCTGTCATTCTTTCCACCTTC
TTGGTCTACATAACCCATGCTGAAAAACAAGGAGTCGAGATTGTGAGACACATTGAGAAA
GGAATCAATCCTCCTTCAGTCAAGGAAATATATTTCACCGGTGATTATCTCCTAAAAGGG
CTTAGGATTGGTATTGTAGCTGGAATGATTGCATTGACGGAAGCTGTTGCAATTGGAAGA
TCATTTGCTGCAAAGAAGGACTATCAGTTGGATGGAAACAAAGAAATGGTGGCACTTGGG
ACAATGAATGTCGTCGGCTCCATGACATCATGCTATGTGACAACAGGTTCCTTCTCTCGT
TCAGCAGTAAATTACATGGCTGGCTGCCAGACTGCAGTTTCCAACATTGTCATGTCTATT
GTTGTGGTCCTGACATTGTTGTTCATAACCCCTCTTTTTGAGTACACTCCGAATGCAATC
CTTTCTGCCATCATTATCTCTGCTGTCATTGGATTGGTAGACTATGAAGCAACGATTTTG
ATTTGGAAGATCGACAAATTTGATTTTGTTGCTTGCATGGGAGCATTTTTCGGTGTGGTT
TTCGCCTCTGTTGAGATAGGTCTTATAATTGCTGTCTCAATATCATTTGCTAAGATTCTC
CTCCAAGTCACAAGGCCACGAACAGCTCTTCTTGGCAAGATCCCTAGGACAAATGTATAT
AGGAACATTCAACAATACCCCGAGGCAACACAAGTTCCCGGTGTACTAATAGTGAGAGTT
GATTCTGCTATCTACTTTTCAAATTCTAACTACATGAGAGAGAGGCAAGACATTATTTCT
TCTATCTTTAATCGGAATTTATATGACGTTTTTCAATTTTCAACTGAAAACATGAACTAA

Peptide Sequence

PEP ID

PGSC0003DMP400016738
PEP Infomation

pacid=37473401 transcript=PGSC0003DMT400024482 locus=PGSC0003DMG400009468 ID=PGSC0003DMT400024482.v4.03 annot-version=v4.03
Sequence

MGLSSVEAINAKEMDYRSLSSSEHQQPPYMHKVGVPPKQNLFDEFKTTVKETLFSDDPLR
PFKDQPRSRKFILGLQAVFPILDWGKSYNVSKFRGDVIAGLTIASLCIPQDIGYAKLANL
APQYGLYSSFVPPLVYSFMGSSRDIAIGPVAVVSLLLGSLLSSEIDPTTNPIEYRRLAFT
ATFFAGITQATLGILRLGFLIDFLSHAAIVGFMGGAAITIALQQLKGFLGIKKFTKETDI
ISVMKSVCRSAQHGWNWPTILIGAIFLTFLLFAKYAGKKNKKLFWIPAIAPLISVILSTF
LVYITHAEKQGVEIVRHIEKGINPPSVKEIYFTGDYLLKGLRIGIVAGMIALTEAVAIGR
SFAAKKDYQLDGNKEMVALGTMNVVGSMTSCYVTTGSFSRSAVNYMAGCQTAVSNIVMSI
VVVLTLLFITPLFEYTPNAILSAIIISAVIGLVDYEATILIWKIDKFDFVACMGAFFGVV
FASVEIGLIIAVSISFAKILLQVTRPRTALLGKIPRTNVYRNIQQYPEATQVPGVLIVRV
DSAIYFSNSNYMRERQDIISSIFNRNLYDVFQFSTENMN*

Transcript Sequence

Transcript ID

PGSC0003DMT400024482
Transcript Infomation

pacid=37473401 locus=PGSC0003DMG400009468 ID=PGSC0003DMT400024482.v4.03 annot-version=v4.03
Sequence

ATGGGTCTATCTAGCGTTGAGGCAATAAACGCAAAAGAAATGGACTACCGAAGTTTGTCA
TCCTCGGAGCACCAACAACCACCATATATGCACAAGGTTGGAGTCCCACCGAAACAGAAC
CTATTCGATGAATTTAAGACTACTGTAAAGGAAACATTGTTTTCAGATGATCCTCTACGC
CCCTTTAAGGATCAACCAAGGTCTCGGAAGTTTATCCTTGGTTTGCAGGCTGTATTTCCC
ATACTAGATTGGGGTAAAAGCTATAATGTTTCCAAATTCAGAGGTGATGTTATTGCTGGT
CTGACTATTGCAAGTCTCTGCATTCCTCAGGACATTGGATATGCAAAACTCGCAAACTTA
GCTCCTCAGTATGGGCTATACTCCAGCTTTGTTCCACCTTTGGTTTATTCCTTCATGGGT
AGCTCGAGAGATATAGCGATAGGACCTGTTGCTGTTGTATCACTATTGCTAGGGTCTCTC
CTAAGCAGTGAAATCGATCCAACGACAAATCCAATTGAATACCGGAGGCTTGCATTTACA
GCTACCTTTTTTGCTGGCATTACCCAAGCTACTCTTGGAATCCTAAGATTGGGATTTTTA
ATAGACTTCCTATCACATGCTGCTATTGTTGGTTTCATGGGTGGTGCGGCCATTACAATT
GCGCTTCAGCAACTTAAAGGTTTTCTGGGCATCAAGAAGTTTACTAAGGAAACTGATATC
ATTTCAGTGATGAAATCAGTATGCCGTTCAGCCCAGCATGGATGGAACTGGCCAACGATT
CTCATTGGAGCAATCTTTTTAACTTTCCTTTTGTTCGCGAAGTACGCTGGAAAGAAGAAC
AAAAAGCTCTTTTGGATACCTGCAATTGCTCCTCTGATCTCTGTCATTCTTTCCACCTTC
TTGGTCTACATAACCCATGCTGAAAAACAAGGAGTCGAGATTGTGAGACACATTGAGAAA
GGAATCAATCCTCCTTCAGTCAAGGAAATATATTTCACCGGTGATTATCTCCTAAAAGGG
CTTAGGATTGGTATTGTAGCTGGAATGATTGCATTGACGGAAGCTGTTGCAATTGGAAGA
TCATTTGCTGCAAAGAAGGACTATCAGTTGGATGGAAACAAAGAAATGGTGGCACTTGGG
ACAATGAATGTCGTCGGCTCCATGACATCATGCTATGTGACAACAGGTTCCTTCTCTCGT
TCAGCAGTAAATTACATGGCTGGCTGCCAGACTGCAGTTTCCAACATTGTCATGTCTATT
GTTGTGGTCCTGACATTGTTGTTCATAACCCCTCTTTTTGAGTACACTCCGAATGCAATC
CTTTCTGCCATCATTATCTCTGCTGTCATTGGATTGGTAGACTATGAAGCAACGATTTTG
ATTTGGAAGATCGACAAATTTGATTTTGTTGCTTGCATGGGAGCATTTTTCGGTGTGGTT
TTCGCCTCTGTTGAGATAGGTCTTATAATTGCTGTCTCAATATCATTTGCTAAGATTCTC
CTCCAAGTCACAAGGCCACGAACAGCTCTTCTTGGCAAGATCCCTAGGACAAATGTATAT
AGGAACATTCAACAATACCCCGAGGCAACACAAGTTCCCGGTGTACTAATAGTGAGAGTT
GATTCTGCTATCTACTTTTCAAATTCTAACTACATGAGAGAGAGGCAAGACATTATTTCT
TCTATCTTTAATCGGAATTTATATGACGTTTTTCAATTTTCAACTGAAAACATGAACTAA