Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400024464
CDS Infomation

pacid=37467127 polypeptide=PGSC0003DMP400016724 locus=PGSC0003DMG400009458 ID=PGSC0003DMT400024464.v4.03 annot-version=v4.03
Sequence

ATGGGCTGTGAGTCTTCTAAACTCGCCTCGTGTTGCTGGAGTGGACAGAATGGTCCTGTT
CGTGAGGCTCAGAATCCTGATGATGAAGAAAGAGCTGAAGTTAGTGATTTGCCTACGTTC
CGCGAGTTTACTGTTGAGCAGCTGAGAATATCTACTTCTGGATTTGCTGTAGAGAATATA
GTTTCAGAACATGGTGAAAAAGCTCCTAATGTTGTTTATAAAGGAAAGTTAGAGAACCAG
AGGAGAGTTGCTGTCAAACGCTTTAATAGATCTGCATGGCCGGATTCCCGACAGTTCTTA
GAAGAAGCCAGATCAGTTGGTCAACTCCGCAACAATAGGTTAGCGAATCTTCTTGGTTGT
TGTTGTGAAGGTGATGAGAGGCTGCTTGTGGCAGAATTTATGCCCAATGAGACACTCGCA
AAGCATCTCTTTCACTGGGAGACACAACCCATGAAATGGGCAATGAGGTTAAGGGTGGCT
TTGTATCTTGGACAGGCTCTCGAGTATTGTACAATCAAAGGGAGGGCACTTTATCATGAT
CTTAATGCTTATAGAATATTATTTGATGAAGAAGGCGACCCCCGTCTCTCTTGCTTTGGT
TTGATGAAAAATAGTCGAGACGGAAAAAGTTACAGCACAAACTTGGCATTTACTCCTCCT
GAATATTTGAGGACAGGAAGAATCACCCCGGAGAGCGTCATGTATAGCTTCGGGACACTC
TTGCTTGACCTTCTCAGTGGAAAACATATTCCTCCAAGCCACGCCCTTGATCTGATTAAA
GACCGGAATCTTCAGATGCTTACGGATTCTTGCTTGGAAGGTCAATTTTCTTCTGATGAT
GGGACTGAATTGGTAAGGATAGCGTCAAGATGTCTGCAATACGAGCCACGTGAGCGGCCA
AATCCAAAGTCGCTGGTTGCTGCTTTATTTCCTCTTCAGAAAGAGATCGAGGTTCCTTCT
CATGCTTTGATGGGTATCTCACGTGATGGTGGAAACATGCCTCTGTCTCCACTTGGTGAA
GCCTGCTTGAGAATGGATCTAACAGCCATCCATGAGATTTTAGAAAAGCTTGGGTACAAA
GATGATGAAGGAGCAGCTACTGAGCTTTCATTCCAGATGTGGACAAATCAGATGCAGGAA
ACGTTGAACTCCAAGAAAAAGGGTGATGCTGCTTTCAGGCACAAAGATGCTAAGGCCGCC
ATCGAATGCTATACACTGTTTATCGATGTCGGAACCATGGTCTCCCCAACTGTGTATGCA
CGGCGTAGTCTGTCTTATCTCATGAATGATATGCCACAGGAAGCCCTCAATGATGCAGTA
CAGGCACAAGTAATATCTCCTGTATGGCATGTTGCTTCGTATTTACAAGCTGCTTCTCTT
TTTGCACTTGGAAGGGAAAATGAGGCACAAATTGCACTCAAGGAAGGTTCTGTTCTTGAA
GAAAAGAAGAACACAAATTCCTGA

Peptide Sequence

PEP ID

PGSC0003DMP400016724
PEP Infomation

pacid=37467127 transcript=PGSC0003DMT400024464 locus=PGSC0003DMG400009458 ID=PGSC0003DMT400024464.v4.03 annot-version=v4.03
Sequence

MGCESSKLASCCWSGQNGPVREAQNPDDEERAEVSDLPTFREFTVEQLRISTSGFAVENI
VSEHGEKAPNVVYKGKLENQRRVAVKRFNRSAWPDSRQFLEEARSVGQLRNNRLANLLGC
CCEGDERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLGQALEYCTIKGRALYHD
LNAYRILFDEEGDPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRITPESVMYSFGTL
LLDLLSGKHIPPSHALDLIKDRNLQMLTDSCLEGQFSSDDGTELVRIASRCLQYEPRERP
NPKSLVAALFPLQKEIEVPSHALMGISRDGGNMPLSPLGEACLRMDLTAIHEILEKLGYK
DDEGAATELSFQMWTNQMQETLNSKKKGDAAFRHKDAKAAIECYTLFIDVGTMVSPTVYA
RRSLSYLMNDMPQEALNDAVQAQVISPVWHVASYLQAASLFALGRENEAQIALKEGSVLE
EKKNTNS*

Transcript Sequence

Transcript ID

PGSC0003DMT400024464
Transcript Infomation

pacid=37467127 locus=PGSC0003DMG400009458 ID=PGSC0003DMT400024464.v4.03 annot-version=v4.03
Sequence

ATGGGCTGTGAGTCTTCTAAACTCGCCTCGTGTTGCTGGAGTGGACAGAATGGTCCTGTT
CGTGAGGCTCAGAATCCTGATGATGAAGAAAGAGCTGAAGTTAGTGATTTGCCTACGTTC
CGCGAGTTTACTGTTGAGCAGCTGAGAATATCTACTTCTGGATTTGCTGTAGAGAATATA
GTTTCAGAACATGGTGAAAAAGCTCCTAATGTTGTTTATAAAGGAAAGTTAGAGAACCAG
AGGAGAGTTGCTGTCAAACGCTTTAATAGATCTGCATGGCCGGATTCCCGACAGTTCTTA
GAAGAAGCCAGATCAGTTGGTCAACTCCGCAACAATAGGTTAGCGAATCTTCTTGGTTGT
TGTTGTGAAGGTGATGAGAGGCTGCTTGTGGCAGAATTTATGCCCAATGAGACACTCGCA
AAGCATCTCTTTCACTGGGAGACACAACCCATGAAATGGGCAATGAGGTTAAGGGTGGCT
TTGTATCTTGGACAGGCTCTCGAGTATTGTACAATCAAAGGGAGGGCACTTTATCATGAT
CTTAATGCTTATAGAATATTATTTGATGAAGAAGGCGACCCCCGTCTCTCTTGCTTTGGT
TTGATGAAAAATAGTCGAGACGGAAAAAGTTACAGCACAAACTTGGCATTTACTCCTCCT
GAATATTTGAGGACAGGAAGAATCACCCCGGAGAGCGTCATGTATAGCTTCGGGACACTC
TTGCTTGACCTTCTCAGTGGAAAACATATTCCTCCAAGCCACGCCCTTGATCTGATTAAA
GACCGGAATCTTCAGATGCTTACGGATTCTTGCTTGGAAGGTCAATTTTCTTCTGATGAT
GGGACTGAATTGGTAAGGATAGCGTCAAGATGTCTGCAATACGAGCCACGTGAGCGGCCA
AATCCAAAGTCGCTGGTTGCTGCTTTATTTCCTCTTCAGAAAGAGATCGAGGTTCCTTCT
CATGCTTTGATGGGTATCTCACGTGATGGTGGAAACATGCCTCTGTCTCCACTTGGTGAA
GCCTGCTTGAGAATGGATCTAACAGCCATCCATGAGATTTTAGAAAAGCTTGGGTACAAA
GATGATGAAGGAGCAGCTACTGAGCTTTCATTCCAGATGTGGACAAATCAGATGCAGGAA
ACGTTGAACTCCAAGAAAAAGGGTGATGCTGCTTTCAGGCACAAAGATGCTAAGGCCGCC
ATCGAATGCTATACACTGTTTATCGATGTCGGAACCATGGTCTCCCCAACTGTGTATGCA
CGGCGTAGTCTGTCTTATCTCATGAATGATATGCCACAGGAAGCCCTCAATGATGCAGTA
CAGGCACAAGTAATATCTCCTGTATGGCATGTTGCTTCGTATTTACAAGCTGCTTCTCTT
TTTGCACTTGGAAGGGAAAATGAGGCACAAATTGCACTCAAGGAAGGTTCTGTTCTTGAA
GAAAAGAAGAACACAAATTCCTGA