Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400024436
CDS Infomation

pacid=37467160 polypeptide=PGSC0003DMP400016709 locus=PGSC0003DMG400009451 ID=PGSC0003DMT400024436.v4.03 annot-version=v4.03
Sequence

ATGGGGAACTGTTGTTCAAGGGGCCAACCTAATGATGATGATCATATTATGAGTAAAGAA
AAATCCAATGATGATCAATCAAAAAGTTGTAATAATTCAATTACACCAACAAAATCTCCT
GACCCTTCTTCAAAACTATCTAAAAAATCCCCTATAGGTCTAGTATTAGGAAGACCAATG
GAAGATGTTAGAAAAACATATTCCATAGGTAAAGAATTAGGAAGGGGTCAATTTGGTGTT
ACACATTTATGTACACACAAACAAAATGGTGAACAATTTGCATGTAAAACAATAGCAAAA
AGGAAATTGGTTAATAAAGAAGATATTGAAGATGTTAAAAGAGAAGTACAAATAATGCAT
CATTTAACAGGTCAACAAAATATTGTTGAACTTAAAGGTGCTTATGAAGACAAACATTCA
GTACATTTGGTTATGGAATTATGTGCTGGTGGTGAACTTTTTGATAGGATTATTACTAAA
GGACATTATACTGAACGTGCTGCTGCTACTTTGCTTAGAACTATTGTTCAAATTGTACAT
ACTTGTCATTCTATGGGTGTTATTCATAGAGATCTCAAGCCTGAGAATTTTCTCCTTCTT
AATAAAGATGAGGATTCACCTCTCAAGGCTACCGATTTTGGTCTTTCCGTCTTTTATAAA
CAAGGAGATGTGTTTAAGGACATAGTGGGTAGTGCATATTACATTGCACCTGAAGTATTG
AAGAGAAGATATGGTCCAGAAGTTGATATATGGAGTGTTGGGGTTATGTTATATATTCTT
CTTTCTGGTGTTCCTCCTTTTTGGGCAGAAACTGAACATGGAATATTCAATGCAATTTTG
CGTGGACATATTGATTTTTCAAGTGATCCATGGCCTGCAATTTCACATGGTGCCAAAGAT
ATTGTTAGGAAGATGTTGACTTCAGATCCCAAACAGAGGTTGACAGCAATCCAAGTGTTA
AATCATCCATGGATCAAGGAGGATGGAGATGCACCAGATACACCACTTGACAATGCTGTT
TTGAGTAGACTCAAACAATTTAGAGCTATGAACAATTTCAAGAAAGTTGCTCTCCGGGTT
ATTGCAGGGTGTTTATCAGAGGAAGAAATAATGGGATTAAAGCAAATGTTCAAAAGTATG
GATGCTGATAATAGTGGAGCAATAACACTTGAGGAGCTAAAACAAGGACTTGCCAAACAA
GGAACTAAATTATCTGATTATGAAATTCAACAATTAATGGAAGCTGCTGATGCTGATGGA
AATGGAACCATAGATTATGAAGAATTTATTACAGCAACAATGCACATGAACAGAATGGAC
AAAGAAGAACATCTTTACACAGCATTTCAATATTTTGACAAGGATAATAGTGGGTACATT
ACAGTAGAAGAGTTAGAGCAAGCTTTAAGAGAATTTGGTATGGATGATGGAAAGGACATA
AAAGATATTGTTGCTGAAGTTGACTCAAATAATGATGGTCGAATTAATTATGATGAATTT
GCAGCTATGATGAGAAAAGGAAGTCCAGAAACAACAGCAAATTTAAAGAAAAGAAGGGAG
TCATTTGTTGTATAA

Peptide Sequence

PEP ID

PGSC0003DMP400016709
PEP Infomation

pacid=37467160 transcript=PGSC0003DMT400024436 locus=PGSC0003DMG400009451 ID=PGSC0003DMT400024436.v4.03 annot-version=v4.03
Sequence

MGNCCSRGQPNDDDHIMSKEKSNDDQSKSCNNSITPTKSPDPSSKLSKKSPIGLVLGRPM
EDVRKTYSIGKELGRGQFGVTHLCTHKQNGEQFACKTIAKRKLVNKEDIEDVKREVQIMH
HLTGQQNIVELKGAYEDKHSVHLVMELCAGGELFDRIITKGHYTERAAATLLRTIVQIVH
TCHSMGVIHRDLKPENFLLLNKDEDSPLKATDFGLSVFYKQGDVFKDIVGSAYYIAPEVL
KRRYGPEVDIWSVGVMLYILLSGVPPFWAETEHGIFNAILRGHIDFSSDPWPAISHGAKD
IVRKMLTSDPKQRLTAIQVLNHPWIKEDGDAPDTPLDNAVLSRLKQFRAMNNFKKVALRV
IAGCLSEEEIMGLKQMFKSMDADNSGAITLEELKQGLAKQGTKLSDYEIQQLMEAADADG
NGTIDYEEFITATMHMNRMDKEEHLYTAFQYFDKDNSGYITVEELEQALREFGMDDGKDI
KDIVAEVDSNNDGRINYDEFAAMMRKGSPETTANLKKRRESFVV*

Transcript Sequence

Transcript ID

PGSC0003DMT400024436
Transcript Infomation

pacid=37467160 locus=PGSC0003DMG400009451 ID=PGSC0003DMT400024436.v4.03 annot-version=v4.03
Sequence

ATGGGGAACTGTTGTTCAAGGGGCCAACCTAATGATGATGATCATATTATGAGTAAAGAA
AAATCCAATGATGATCAATCAAAAAGTTGTAATAATTCAATTACACCAACAAAATCTCCT
GACCCTTCTTCAAAACTATCTAAAAAATCCCCTATAGGTCTAGTATTAGGAAGACCAATG
GAAGATGTTAGAAAAACATATTCCATAGGTAAAGAATTAGGAAGGGGTCAATTTGGTGTT
ACACATTTATGTACACACAAACAAAATGGTGAACAATTTGCATGTAAAACAATAGCAAAA
AGGAAATTGGTTAATAAAGAAGATATTGAAGATGTTAAAAGAGAAGTACAAATAATGCAT
CATTTAACAGGTCAACAAAATATTGTTGAACTTAAAGGTGCTTATGAAGACAAACATTCA
GTACATTTGGTTATGGAATTATGTGCTGGTGGTGAACTTTTTGATAGGATTATTACTAAA
GGACATTATACTGAACGTGCTGCTGCTACTTTGCTTAGAACTATTGTTCAAATTGTACAT
ACTTGTCATTCTATGGGTGTTATTCATAGAGATCTCAAGCCTGAGAATTTTCTCCTTCTT
AATAAAGATGAGGATTCACCTCTCAAGGCTACCGATTTTGGTCTTTCCGTCTTTTATAAA
CAAGGAGATGTGTTTAAGGACATAGTGGGTAGTGCATATTACATTGCACCTGAAGTATTG
AAGAGAAGATATGGTCCAGAAGTTGATATATGGAGTGTTGGGGTTATGTTATATATTCTT
CTTTCTGGTGTTCCTCCTTTTTGGGCAGAAACTGAACATGGAATATTCAATGCAATTTTG
CGTGGACATATTGATTTTTCAAGTGATCCATGGCCTGCAATTTCACATGGTGCCAAAGAT
ATTGTTAGGAAGATGTTGACTTCAGATCCCAAACAGAGGTTGACAGCAATCCAAGTGTTA
AATCATCCATGGATCAAGGAGGATGGAGATGCACCAGATACACCACTTGACAATGCTGTT
TTGAGTAGACTCAAACAATTTAGAGCTATGAACAATTTCAAGAAAGTTGCTCTCCGGGTT
ATTGCAGGGTGTTTATCAGAGGAAGAAATAATGGGATTAAAGCAAATGTTCAAAAGTATG
GATGCTGATAATAGTGGAGCAATAACACTTGAGGAGCTAAAACAAGGACTTGCCAAACAA
GGAACTAAATTATCTGATTATGAAATTCAACAATTAATGGAAGCTGCTGATGCTGATGGA
AATGGAACCATAGATTATGAAGAATTTATTACAGCAACAATGCACATGAACAGAATGGAC
AAAGAAGAACATCTTTACACAGCATTTCAATATTTTGACAAGGATAATAGTGGGTACATT
ACAGTAGAAGAGTTAGAGCAAGCTTTAAGAGAATTTGGTATGGATGATGGAAAGGACATA
AAAGATATTGTTGCTGAAGTTGACTCAAATAATGATGGTCGAATTAATTATGATGAATTT
GCAGCTATGATGAGAAAAGGAAGTCCAGAAACAACAGCAAATTTAAAGAAAAGAAGGGAG
TCATTTGTTGTATAA