Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400024422
CDS Infomation

pacid=37465797 polypeptide=PGSC0003DMP400016700 locus=PGSC0003DMG400009447 ID=PGSC0003DMT400024422.v4.03 annot-version=v4.03
Sequence

ATGGATTTTTCATCTCCACCTTCAACTTCTCCCTATGTGACAGCACCAACAAGTCCAACT
TCTTACATGGTGCAATATTACCATAGCGCCCCGGCTAGCCCGGGTAAAAGGGTTGGTAGC
ACTATAGCTGAGGGTGGTGATTGTGGGTTGACCACCCTGAATGATTTTGAATTTGAAACA
AGCAAAAAGTTTGATACAAGTTGTGTGGAGTTTGAGACATGTCATGAGAACTTTGACCAC
TCTGAGGATGATCAATCGTGGGACGAGAAACGAAGAGAGAGGGGTGGCTCACTCCCAGAG
ATGGCATTTGCGGATGAACTTTTCTCTAACGGTCATGTCATGCCCCTTAAACTACCACCA
AGGCTCCAATGTGAACGTGACATCAAATTATATACTAGTCAACGATCGATTACATGCTCA
ACTATCTCTCCAAGTGCTATCGTTAAGTCCTCGTTTGCTCGACGAGACATCAATCCTTTT
GTTGTTGCCATGCAAAAGGTGATGAAGGAAGATAATAGGGGGAGGGATAGCAATCCAAAT
CATCACCATAGGCGCACAAGGTCACATTCACCATTTAGAGCACAAAATTTGGAATGGACT
ATTGAGGAGATGAGAAAAGAAATTGTTTCCATGTCACCAATTCAACCTTCAAGCCCAAAT
ACAAGAAAGCCCATAGAGTCTAAGGCCAAGGGAGCATCATATGGAAGATGGGTTCTAAAC
CATTCTATGACTATTGGGCCAACCTCAAAAGAATCCAAGAACTTGCTTTTTGGAACAAAA
GAGCCTAAGCTCAAACCCAACAAGGCCACTTCAAATGGTGTTGCCCAAAAAACTAATGAA
GGGAATGTGTTTGTGCAAACCAAAATGCAAAAATTTAAAGGAATGCTAGTGAGATATGCA
ACATTTGGAAAAGAGAACAATGAAGGAAATACGATAAATCCAATTTCAGCACTATGGAAG
CCTAATTACTTCAAGAAGTTGAGTTTCAAGTTCAAGGGGAATAAAAAGGTAAATGGAGGG
GAGTCAAAGTTGGTGATTGTGAAGTACAAACCAGCACTTTGTTTGGGTTATGGACTTGAA
AGTCCTAGGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400016700
PEP Infomation

pacid=37465797 transcript=PGSC0003DMT400024422 locus=PGSC0003DMG400009447 ID=PGSC0003DMT400024422.v4.03 annot-version=v4.03
Sequence

MDFSSPPSTSPYVTAPTSPTSYMVQYYHSAPASPGKRVGSTIAEGGDCGLTTLNDFEFET
SKKFDTSCVEFETCHENFDHSEDDQSWDEKRRERGGSLPEMAFADELFSNGHVMPLKLPP
RLQCERDIKLYTSQRSITCSTISPSAIVKSSFARRDINPFVVAMQKVMKEDNRGRDSNPN
HHHRRTRSHSPFRAQNLEWTIEEMRKEIVSMSPIQPSSPNTRKPIESKAKGASYGRWVLN
HSMTIGPTSKESKNLLFGTKEPKLKPNKATSNGVAQKTNEGNVFVQTKMQKFKGMLVRYA
TFGKENNEGNTINPISALWKPNYFKKLSFKFKGNKKVNGGESKLVIVKYKPALCLGYGLE
SPR*

Transcript Sequence

Transcript ID

PGSC0003DMT400024422
Transcript Infomation

pacid=37465797 locus=PGSC0003DMG400009447 ID=PGSC0003DMT400024422.v4.03 annot-version=v4.03
Sequence

ATGGATTTTTCATCTCCACCTTCAACTTCTCCCTATGTGACAGCACCAACAAGTCCAACT
TCTTACATGGTGCAATATTACCATAGCGCCCCGGCTAGCCCGGGTAAAAGGGTTGGTAGC
ACTATAGCTGAGGGTGGTGATTGTGGGTTGACCACCCTGAATGATTTTGAATTTGAAACA
AGCAAAAAGTTTGATACAAGTTGTGTGGAGTTTGAGACATGTCATGAGAACTTTGACCAC
TCTGAGGATGATCAATCGTGGGACGAGAAACGAAGAGAGAGGGGTGGCTCACTCCCAGAG
ATGGCATTTGCGGATGAACTTTTCTCTAACGGTCATGTCATGCCCCTTAAACTACCACCA
AGGCTCCAATGTGAACGTGACATCAAATTATATACTAGTCAACGATCGATTACATGCTCA
ACTATCTCTCCAAGTGCTATCGTTAAGTCCTCGTTTGCTCGACGAGACATCAATCCTTTT
GTTGTTGCCATGCAAAAGGTGATGAAGGAAGATAATAGGGGGAGGGATAGCAATCCAAAT
CATCACCATAGGCGCACAAGGTCACATTCACCATTTAGAGCACAAAATTTGGAATGGACT
ATTGAGGAGATGAGAAAAGAAATTGTTTCCATGTCACCAATTCAACCTTCAAGCCCAAAT
ACAAGAAAGCCCATAGAGTCTAAGGCCAAGGGAGCATCATATGGAAGATGGGTTCTAAAC
CATTCTATGACTATTGGGCCAACCTCAAAAGAATCCAAGAACTTGCTTTTTGGAACAAAA
GAGCCTAAGCTCAAACCCAACAAGGCCACTTCAAATGGTGTTGCCCAAAAAACTAATGAA
GGGAATGTGTTTGTGCAAACCAAAATGCAAAAATTTAAAGGAATGCTAGTGAGATATGCA
ACATTTGGAAAAGAGAACAATGAAGGAAATACGATAAATCCAATTTCAGCACTATGGAAG
CCTAATTACTTCAAGAAGTTGAGTTTCAAGTTCAAGGGGAATAAAAAGGTAAATGGAGGG
GAGTCAAAGTTGGTGATTGTGAAGTACAAACCAGCACTTTGTTTGGGTTATGGACTTGAA
AGTCCTAGGTAA