Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400024406
CDS Infomation

pacid=37424501 polypeptide=PGSC0003DMP400016688 locus=PGSC0003DMG400009435 ID=PGSC0003DMT400024406.v4.03 annot-version=v4.03
Sequence

ATGACAAAGAAGCGAGAAGTAGAAGATGGCATGGTGCCTGAGGAGTCGAATGCAAAACGG
CAGAAGGTAATGGATCAGTCGTCTCCCTCTCTTCCACCAGTTGCTTTTGAGAATCCACTT
CTTCCACTTGCATCTTATGATGATGATGAAGACGACGAGGATGCTGGTGGGAAAGGACAC
ATTGCTGAGCAAGTTATAAATAATGGTGGAGACAAGGAGCAAAATGGCTACTCATCTGAC
GACGAAGAAGATGAGGATGATGGTAGAAGCCAAGGGAAGCGAAATCGTGCAATTGAGATT
AGGAGGGATTGCCCCCATCTTGATACTGTGAATAGACAGGTCTTGGATTTTGACTTTGAG
AAATTTTGTTCGGTCTCTCTCACAAATTTAAATGTGTATGCATGTTTAGTCTGTGGGAAA
TATTTTCAAGGAAGGGGACCAAAATCCCATGCGTATACACACAGTCTTGAAGCAGGACAC
CATGTGTTCATCAATTTACGAACAGAGAAAGTTTATTGTCTTCCTGATGGATATGAAGTC
ATAGATCCATCGCTTGATGACATTATACATGTTCTGAATCCAAGATTTACTCAGGAACAG
GTTAAGCAACTCGATAAGAGCCGACAGTGGTCTAGGGCACTTGATGGGTCTGATTATCTT
CCTGGAACGGTTGGGCTGAATAACATCAAGGAGACTGATTTTGTCAATGTCACGATTCAG
TCTTTGATGCGAGTAACTCCCTTGAGAAACTTCTTTCTTATCCCTGAAAATTATCAACAC
AATAGATCTCCTCTTGTTCATAGATTTGGAGAGCTTACCCGAAAGATTTGGCATGCACGG
AACTTTAAAGGACAGGTCAGTCCGCATGAGTTCTTGCAAGCGGTTATGAAAGCTAGTAAA
AAACGTTTTCGGATAGGTGCCCAGTCTGACCCTGTTGAATTTATGTCATGGCTCCTGAAT
ACCCTTCACACAGAGCTTAGAAGTTCCAAAAAAGGCAGTAGCATAATCCATCGGTGCTTT
CAGGGGGAATTGGAGGTTGTGAAAGAGATGCATAATAGATCTATTGCTGAAAAGAGGGAG
AATGGGGAGGATGGTGAACATGAATCTCACAATATTGGCATGGAAACTAGCAGAATGCCT
TTCATAATGCTTGGACTTGATTTGCCACCACCTCCTCTTTTTACAGATGTCATGGAAAAG
AATATTATTCCCCAGGTTCCATTATTCAACATACTAAAGAAGTTTGATGGTGATACTGTC
ACTGAAGTTGTAAGGCCCCGTATAGCAAGGATGAGATACCGTGTGACAAAATTGCCAAAG
TATCTAATTCTCCACATGCGTAGGTTTACAAAGAACAATTTCTTCATGGAGAAAAATCCT
ACACTTGTGAACTTCCCTGTGAAGAATCTAGAGCTCAAGGATTATATTCCCCTGCCAGCA
CCAAAGGAGAATGAGAAACTTCGCTCAAAATATGATTTGATTGCTAATATTGTTCATGAT
GGAAAGCCAGGCGAAGGATCATACAGAGTGTTTGTCCAACGAAAATCAGAAGAACTTTGG
TATGAGATGCAAGACCTACATGTTTCTGAAACTCTTCCCCAGATGGTTGCGCTTTCTGAG
ACTTATATGCAGATATATGAGCAGCATCAGCAGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400016688
PEP Infomation

pacid=37424501 transcript=PGSC0003DMT400024406 locus=PGSC0003DMG400009435 ID=PGSC0003DMT400024406.v4.03 annot-version=v4.03
Sequence

MTKKREVEDGMVPEESNAKRQKVMDQSSPSLPPVAFENPLLPLASYDDDEDDEDAGGKGH
IAEQVINNGGDKEQNGYSSDDEEDEDDGRSQGKRNRAIEIRRDCPHLDTVNRQVLDFDFE
KFCSVSLTNLNVYACLVCGKYFQGRGPKSHAYTHSLEAGHHVFINLRTEKVYCLPDGYEV
IDPSLDDIIHVLNPRFTQEQVKQLDKSRQWSRALDGSDYLPGTVGLNNIKETDFVNVTIQ
SLMRVTPLRNFFLIPENYQHNRSPLVHRFGELTRKIWHARNFKGQVSPHEFLQAVMKASK
KRFRIGAQSDPVEFMSWLLNTLHTELRSSKKGSSIIHRCFQGELEVVKEMHNRSIAEKRE
NGEDGEHESHNIGMETSRMPFIMLGLDLPPPPLFTDVMEKNIIPQVPLFNILKKFDGDTV
TEVVRPRIARMRYRVTKLPKYLILHMRRFTKNNFFMEKNPTLVNFPVKNLELKDYIPLPA
PKENEKLRSKYDLIANIVHDGKPGEGSYRVFVQRKSEELWYEMQDLHVSETLPQMVALSE
TYMQIYEQHQQ*

Transcript Sequence

Transcript ID

PGSC0003DMT400024406
Transcript Infomation

pacid=37424501 locus=PGSC0003DMG400009435 ID=PGSC0003DMT400024406.v4.03 annot-version=v4.03
Sequence

ATGACAAAGAAGCGAGAAGTAGAAGATGGCATGGTGCCTGAGGAGTCGAATGCAAAACGG
CAGAAGGTAATGGATCAGTCGTCTCCCTCTCTTCCACCAGTTGCTTTTGAGAATCCACTT
CTTCCACTTGCATCTTATGATGATGATGAAGACGACGAGGATGCTGGTGGGAAAGGACAC
ATTGCTGAGCAAGTTATAAATAATGGTGGAGACAAGGAGCAAAATGGCTACTCATCTGAC
GACGAAGAAGATGAGGATGATGGTAGAAGCCAAGGGAAGCGAAATCGTGCAATTGAGATT
AGGAGGGATTGCCCCCATCTTGATACTGTGAATAGACAGGTCTTGGATTTTGACTTTGAG
AAATTTTGTTCGGTCTCTCTCACAAATTTAAATGTGTATGCATGTTTAGTCTGTGGGAAA
TATTTTCAAGGAAGGGGACCAAAATCCCATGCGTATACACACAGTCTTGAAGCAGGACAC
CATGTGTTCATCAATTTACGAACAGAGAAAGTTTATTGTCTTCCTGATGGATATGAAGTC
ATAGATCCATCGCTTGATGACATTATACATGTTCTGAATCCAAGATTTACTCAGGAACAG
GTTAAGCAACTCGATAAGAGCCGACAGTGGTCTAGGGCACTTGATGGGTCTGATTATCTT
CCTGGAACGGTTGGGCTGAATAACATCAAGGAGACTGATTTTGTCAATGTCACGATTCAG
TCTTTGATGCGAGTAACTCCCTTGAGAAACTTCTTTCTTATCCCTGAAAATTATCAACAC
AATAGATCTCCTCTTGTTCATAGATTTGGAGAGCTTACCCGAAAGATTTGGCATGCACGG
AACTTTAAAGGACAGGTCAGTCCGCATGAGTTCTTGCAAGCGGTTATGAAAGCTAGTAAA
AAACGTTTTCGGATAGGTGCCCAGTCTGACCCTGTTGAATTTATGTCATGGCTCCTGAAT
ACCCTTCACACAGAGCTTAGAAGTTCCAAAAAAGGCAGTAGCATAATCCATCGGTGCTTT
CAGGGGGAATTGGAGGTTGTGAAAGAGATGCATAATAGATCTATTGCTGAAAAGAGGGAG
AATGGGGAGGATGGTGAACATGAATCTCACAATATTGGCATGGAAACTAGCAGAATGCCT
TTCATAATGCTTGGACTTGATTTGCCACCACCTCCTCTTTTTACAGATGTCATGGAAAAG
AATATTATTCCCCAGGTTCCATTATTCAACATACTAAAGAAGTTTGATGGTGATACTGTC
ACTGAAGTTGTAAGGCCCCGTATAGCAAGGATGAGATACCGTGTGACAAAATTGCCAAAG
TATCTAATTCTCCACATGCGTAGGTTTACAAAGAACAATTTCTTCATGGAGAAAAATCCT
ACACTTGTGAACTTCCCTGTGAAGAATCTAGAGCTCAAGGATTATATTCCCCTGCCAGCA
CCAAAGGAGAATGAGAAACTTCGCTCAAAATATGATTTGATTGCTAATATTGTTCATGAT
GGAAAGCCAGGCGAAGGATCATACAGAGTGTTTGTCCAACGAAAATCAGAAGAACTTTGG
TATGAGATGCAAGACCTACATGTTTCTGAAACTCTTCCCCAGATGGTTGCGCTTTCTGAG
ACTTATATGCAGATATATGAGCAGCATCAGCAGTAA