Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400024400
CDS Infomation

pacid=37426573 polypeptide=PGSC0003DMP400016683 locus=PGSC0003DMG400009431 ID=PGSC0003DMT400024400.v4.03 annot-version=v4.03
Sequence

ATGGGGAAGAATAAGAGTTCAAGGAAAGGGAAGAAGGCATGGAGAGCAAACATAAGTACG
GAGGATATTGAAGATTTCTTTGACAACTCCACCAAAGATGCTCTTTCCGGCGGTTCTCTT
GCTCAAGTTCCCAGTGACTCTCTCTTTTACGTCGACAAATCCAGAGATCTTTCTGTCAAA
CGGAAAATTGAAAAACACCGGGAGAAAGTACTTCGATATGATAGTATACTACAAAGCAAT
GCCTTTGTTGAACCTGTACCTTCTTCAACTGGGAAGAAGTCCAAGAAGAAAAGTAAACTT
CAGATAGCCAAAGATACTGCTCAACAGGGTCAAAAGGATTTGTCCGGTGGAGACTCTGGC
ATGGTTGACATTTGGGATGATAAAGGTGAACTGGTCATCAAAACCAAAAAGAAGCCCAAG
ACTTCTGTTATACCTGCTGTGGAAGTTGAGCCTCCAGGATGCTCATTCAATCCGCCATCC
GAAAGTCATCAGGATGCACTAGCTTGTGCTGTTGCAGATGAAATGCAGAAAATTTATAGA
AATGAATTGGGGCCAGAGCCTATTCCATTGGTTGTTCCTGGAGAAGCAGTTAATGAAGAA
GATATGTATTTCCTTGAAGCGGACAGTGGGAGTGACACGGAGAATGAAAATCTAGTGGAA
GACGGAAAAACAGATTTGGATAAAAGGTCGCAAAAGCCCAAAATGCTGACACAAGTTGAT
AAGAATCGACGGGCTAGACGCAAAGAACAGTTGAAAGCAGAAGCTGAAGCAACAAAAGCA
GCACAACTCTCCAAAGAGATTGATAGCTTACCGGATATAATTCAAGAAATAGAGAGAGAG
GAAGGAGAAAAACAGAAACGACATCTACGTCGTGTTACTGCTATAAAAGAAAAACTAAAA
TCTTGTCCACCACGCTTGGGAAAGCGCAAATTTGTGCCTGCTCCTGCTCAGGTTTTACTG
TCTGAAGAGATTACTGGTTCCCTCCGTAAATTAAAGGGATGTTGCACCCTTGCAAGAGAT
CGGTTTAAAAGCCTTGAGAAAAGGGGACTAGTTGTTCCTTCAAAAAAGAGTAGCAGGAAA
TAG

Peptide Sequence

PEP ID

PGSC0003DMP400016683
PEP Infomation

pacid=37426573 transcript=PGSC0003DMT400024400 locus=PGSC0003DMG400009431 ID=PGSC0003DMT400024400.v4.03 annot-version=v4.03
Sequence

MGKNKSSRKGKKAWRANISTEDIEDFFDNSTKDALSGGSLAQVPSDSLFYVDKSRDLSVK
RKIEKHREKVLRYDSILQSNAFVEPVPSSTGKKSKKKSKLQIAKDTAQQGQKDLSGGDSG
MVDIWDDKGELVIKTKKKPKTSVIPAVEVEPPGCSFNPPSESHQDALACAVADEMQKIYR
NELGPEPIPLVVPGEAVNEEDMYFLEADSGSDTENENLVEDGKTDLDKRSQKPKMLTQVD
KNRRARRKEQLKAEAEATKAAQLSKEIDSLPDIIQEIEREEGEKQKRHLRRVTAIKEKLK
SCPPRLGKRKFVPAPAQVLLSEEITGSLRKLKGCCTLARDRFKSLEKRGLVVPSKKSSRK
*

Transcript Sequence

Transcript ID

PGSC0003DMT400024400
Transcript Infomation

pacid=37426573 locus=PGSC0003DMG400009431 ID=PGSC0003DMT400024400.v4.03 annot-version=v4.03
Sequence

ATGGGGAAGAATAAGAGTTCAAGGAAAGGGAAGAAGGCATGGAGAGCAAACATAAGTACG
GAGGATATTGAAGATTTCTTTGACAACTCCACCAAAGATGCTCTTTCCGGCGGTTCTCTT
GCTCAAGTTCCCAGTGACTCTCTCTTTTACGTCGACAAATCCAGAGATCTTTCTGTCAAA
CGGAAAATTGAAAAACACCGGGAGAAAGTACTTCGATATGATAGTATACTACAAAGCAAT
GCCTTTGTTGAACCTGTACCTTCTTCAACTGGGAAGAAGTCCAAGAAGAAAAGTAAACTT
CAGATAGCCAAAGATACTGCTCAACAGGGTCAAAAGGATTTGTCCGGTGGAGACTCTGGC
ATGGTTGACATTTGGGATGATAAAGGTGAACTGGTCATCAAAACCAAAAAGAAGCCCAAG
ACTTCTGTTATACCTGCTGTGGAAGTTGAGCCTCCAGGATGCTCATTCAATCCGCCATCC
GAAAGTCATCAGGATGCACTAGCTTGTGCTGTTGCAGATGAAATGCAGAAAATTTATAGA
AATGAATTGGGGCCAGAGCCTATTCCATTGGTTGTTCCTGGAGAAGCAGTTAATGAAGAA
GATATGTATTTCCTTGAAGCGGACAGTGGGAGTGACACGGAGAATGAAAATCTAGTGGAA
GACGGAAAAACAGATTTGGATAAAAGGTCGCAAAAGCCCAAAATGCTGACACAAGTTGAT
AAGAATCGACGGGCTAGACGCAAAGAACAGTTGAAAGCAGAAGCTGAAGCAACAAAAGCA
GCACAACTCTCCAAAGAGATTGATAGCTTACCGGATATAATTCAAGAAATAGAGAGAGAG
GAAGGAGAAAAACAGAAACGACATCTACGTCGTGTTACTGCTATAAAAGAAAAACTAAAA
TCTTGTCCACCACGCTTGGGAAAGCGCAAATTTGTGCCTGCTCCTGCTCAGGTTTTACTG
TCTGAAGAGATTACTGGTTCCCTCCGTAAATTAAAGGGATGTTGCACCCTTGCAAGAGAT
CGGTTTAAAAGCCTTGAGAAAAGGGGACTAGTTGTTCCTTCAAAAAAGAGTAGCAGGAAA
TAG