Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400024398
CDS Infomation

pacid=37427284 polypeptide=PGSC0003DMP400016681 locus=PGSC0003DMG400009430 ID=PGSC0003DMT400024398.v4.03 annot-version=v4.03
Sequence

ATGGCGGCGCCTCCTTCTATTACATCCTCATTTCCAGTTCCCCATGCAATCATGAAGAAC
TCTCTTTCAATCTTATCCTTCATTCTTCTTCTTTCTCCTTTGTTCGCCAAGGCTAACACA
TCATTTGGTGCTGAAAATACAGAAGGCATAAAGTATGATCTTTTCCCTGAAATCCTCAAG
GAGGAAGCTGTTGGAAGACTTAATGAGCTTGGAAAGGTAAGTGATGCAAACGGCTACCTA
GAGAGGACCTTCCAGAGCCCTGCATCGATCAGAGCGGGAAATCTTCTTCGTGCATGGATG
GAAGATGCAGGCTTGAAAACGTGGGTGGACCAAATGGGCAATGTCCATGGTCGGGCTGAA
GGAATTAATCCAAGTGAAAGGGCTTTGTTAATTGGCTCTCATTTGGATACAGTTATTGAT
GCTGGATTCTTTGATGGTTCATTGGGCATAATTTGTGCAATATCTGCATTAAAGGCATTG
AATTCCTCTGGAAGGTTGGGTAAACTCCAGCGGCCAGTTGAGGTAATCGCGTTTAGTGAT
GAGGAGGGAGTAAGGTTTCAGTCAACCTTCTTGGGCAGTGCAGCTATTGCTGGCATATTA
CCAGTTTCAGCGTTGCAAGTACATGATAAGAATGGTGTGACAGTGCAAGGTGCCCTGAGA
TCAAGTTCTATAGAGACTACTGAAGAAAACCTTTTGCAGCTCAAATATGAACCAGAATCT
GTTTGGGGCTATGTTGAGGTTCACATTGAACAGGGACCTGTACTGGAGAATGTTGGTCTC
CCTCTTGGTTCAGTAAAAGGCATTGCAGGACAGACAAGGTTGAAGGTGACAGTGAAAGGC
ACACAAGGACATGCAGGGACAGTACCCATGAATATGCGACAGGATCCTATGGTTGCAGCT
GCTGAACTAATTGTATTTCTGGAAAGTCTTTGTAAACAACCTGACTATTATCTGTCATAT
GATGGTCAATGCACATCTTCAACAGTGGAATCTCTTGCAGGATCTCTGGTCTGTACTGTT
GGAGAGATATCAACTTGGCCAAGTGCAAGTAATGTCATTCCAGGCCAGGTGACATTCACC
GTAGATGTACGTGCGATGGATGACTCAGGACGAGAAGCTATAATTTATGAATTCTCTAAT
AGACTCTACCATATGTGTGATAGGCGTTCTGTCTTCTGTAATGTTGAGAGAAAGCATGAT
GCAAATGCTGTGGTTTGCGATCCTGGCCTGAGTACACAGCTAAAATCTGCATCTTATACT
GCTTTGAAAAGAATAACTGGTGAGGATCCAGGTGATGTTCCTGTACTGATGAGTGGAGCA
GGACATGATGCAATGGCCATGTCTCATCTAACCAAGGTGGGAATGCTATTTGTGCGTTGT
CGTGGAGGCATCAGCCATTCTCCTGCAGAACATGTATTGGATGATGATGTTTGGGCAGCT
GGAATGGCTGTCCTTGCATTTTTTGAGACACTCTTGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400016681
PEP Infomation

pacid=37427284 transcript=PGSC0003DMT400024398 locus=PGSC0003DMG400009430 ID=PGSC0003DMT400024398.v4.03 annot-version=v4.03
Sequence

MAAPPSITSSFPVPHAIMKNSLSILSFILLLSPLFAKANTSFGAENTEGIKYDLFPEILK
EEAVGRLNELGKVSDANGYLERTFQSPASIRAGNLLRAWMEDAGLKTWVDQMGNVHGRAE
GINPSERALLIGSHLDTVIDAGFFDGSLGIICAISALKALNSSGRLGKLQRPVEVIAFSD
EEGVRFQSTFLGSAAIAGILPVSALQVHDKNGVTVQGALRSSSIETTEENLLQLKYEPES
VWGYVEVHIEQGPVLENVGLPLGSVKGIAGQTRLKVTVKGTQGHAGTVPMNMRQDPMVAA
AELIVFLESLCKQPDYYLSYDGQCTSSTVESLAGSLVCTVGEISTWPSASNVIPGQVTFT
VDVRAMDDSGREAIIYEFSNRLYHMCDRRSVFCNVERKHDANAVVCDPGLSTQLKSASYT
ALKRITGEDPGDVPVLMSGAGHDAMAMSHLTKVGMLFVRCRGGISHSPAEHVLDDDVWAA
GMAVLAFFETLL*

Transcript Sequence

Transcript ID

PGSC0003DMT400024398
Transcript Infomation

pacid=37427284 locus=PGSC0003DMG400009430 ID=PGSC0003DMT400024398.v4.03 annot-version=v4.03
Sequence

ATGGCGGCGCCTCCTTCTATTACATCCTCATTTCCAGTTCCCCATGCAATCATGAAGAAC
TCTCTTTCAATCTTATCCTTCATTCTTCTTCTTTCTCCTTTGTTCGCCAAGGCTAACACA
TCATTTGGTGCTGAAAATACAGAAGGCATAAAGTATGATCTTTTCCCTGAAATCCTCAAG
GAGGAAGCTGTTGGAAGACTTAATGAGCTTGGAAAGGTAAGTGATGCAAACGGCTACCTA
GAGAGGACCTTCCAGAGCCCTGCATCGATCAGAGCGGGAAATCTTCTTCGTGCATGGATG
GAAGATGCAGGCTTGAAAACGTGGGTGGACCAAATGGGCAATGTCCATGGTCGGGCTGAA
GGAATTAATCCAAGTGAAAGGGCTTTGTTAATTGGCTCTCATTTGGATACAGTTATTGAT
GCTGGATTCTTTGATGGTTCATTGGGCATAATTTGTGCAATATCTGCATTAAAGGCATTG
AATTCCTCTGGAAGGTTGGGTAAACTCCAGCGGCCAGTTGAGGTAATCGCGTTTAGTGAT
GAGGAGGGAGTAAGGTTTCAGTCAACCTTCTTGGGCAGTGCAGCTATTGCTGGCATATTA
CCAGTTTCAGCGTTGCAAGTACATGATAAGAATGGTGTGACAGTGCAAGGTGCCCTGAGA
TCAAGTTCTATAGAGACTACTGAAGAAAACCTTTTGCAGCTCAAATATGAACCAGAATCT
GTTTGGGGCTATGTTGAGGTTCACATTGAACAGGGACCTGTACTGGAGAATGTTGGTCTC
CCTCTTGGTTCAGTAAAAGGCATTGCAGGACAGACAAGGTTGAAGGTGACAGTGAAAGGC
ACACAAGGACATGCAGGGACAGTACCCATGAATATGCGACAGGATCCTATGGTTGCAGCT
GCTGAACTAATTGTATTTCTGGAAAGTCTTTGTAAACAACCTGACTATTATCTGTCATAT
GATGGTCAATGCACATCTTCAACAGTGGAATCTCTTGCAGGATCTCTGGTCTGTACTGTT
GGAGAGATATCAACTTGGCCAAGTGCAAGTAATGTCATTCCAGGCCAGGTGACATTCACC
GTAGATGTACGTGCGATGGATGACTCAGGACGAGAAGCTATAATTTATGAATTCTCTAAT
AGACTCTACCATATGTGTGATAGGCGTTCTGTCTTCTGTAATGTTGAGAGAAAGCATGAT
GCAAATGCTGTGGTTTGCGATCCTGGCCTGAGTACACAGCTAAAATCTGCATCTTATACT
GCTTTGAAAAGAATAACTGGTGAGGATCCAGGTGATGTTCCTGTACTGATGAGTGGAGCA
GGACATGATGCAATGGCCATGTCTCATCTAACCAAGGTGGGAATGCTATTTGTGCGTTGT
CGTGGAGGCATCAGCCATTCTCCTGCAGAACATGTATTGGATGATGATGTTTGGGCAGCT
GGAATGGCTGTCCTTGCATTTTTTGAGACACTCTTGTAA