Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400024331
CDS Infomation

pacid=37429029 polypeptide=PGSC0003DMP400016631 locus=PGSC0003DMG400009407 ID=PGSC0003DMT400024331.v4.03 annot-version=v4.03
Sequence

ATGACCATATCTGAGAGAAGCATGAACCGGCCCGTCGGAATCAAACCGGATCCGTCCAAG
AAGCCGGTTTACCTCACCAAAGCACAGAGAGAGCAGTTAGCCCTTCAGGACGAGATCGCC
GATCAGAAACGCTGCCACGAACATCTTCAGGCTAAGTACAACTGCCCTTCCTCCGATAAC
CACTATTGCGGCAAGAACCGAAAAAGAGATAGAGACAGGAACAGTGACAGAGATAGAGAG
AAGGAACCGAATCGAGTTAGATTGGAGAATCCGGCAGAGAAGGAACTCGAAGCTATTCAT
GAGCAATATTTGGGATCTAAGAAACCCAAGAAACGGGTGATTACACCCAGTGCAAAACTC
CGATCATCCTTCGACTGGCAGAACTCTGAAGACACTTCTCGTGACGTCAACCCTCTTTAT
CAAAACCCTCACGAAGCCCGTCCACACTTTGGTCGCGGATTCTTCGGTGGAATCGACAGA
AGGGAGCAGAAGAAGCTTGCCATCAAGAATGAGAGGGAGATGCAGGAGGAGATTTGGAAG
AAGGGAGGTGTTGAGGCGACTGCAGTAGAAGCAGCTGCCTTGAAGAAGAAGGAACAAAAT
GCTGATTTGTATGACACTTTTGACATGAGGGTTGATCAACACTGGACAGATAAGAAGCTG
GAGGAAATGACAGAGAGAGATTGGAGGATATTTAGGGAGGATTACAACATATCCTATAAG
GGGTCGAGGATACCCCGTCCCATGAGGAATTGGGCCGAGAGCAAGTTAACTACAGAGTTG
CTTAAGGCCGTTGAGAGGGCTGGCTACAAGAAGCCTTCTCCTATTCAAATGGCTTCCATT
CCACTTGGACTTCAACAACGTGATGTGATTGGTGTAGCAGAGACTGGTTCAGGTAAAACT
GCTGCTTTTGTTCTCCCTATGCTGAATTATATCACTAGGCTTCCTCCATTGAGTGAAGAG
AATGAGGCAGAGGGGCCATATGCGGTTGTAATGGTGCCCACACGAGAACTAGCTCAACAA
ATTGAGGATGAGACCGTCAAGTTTGCACACTATTTGGGTATCAAAGTTGTTTCTATTGTT
GGTGGGCAGTCCATAGAAGAGCAAGGTTTTAGGATTAGGCAAGGCTGTGAAGTTGTGATT
GCAACACCTGGGCGACTTCTCGATTGCTTGGAGAGACGTTATTGTGTTATGAACCAGTGT
AACTATGTTGTTCTTGATGAGGCTGACCGGATGATTGATATGGGTTTTGGACCTCAAGTT
GTTGGTGTACTGGATGCAATGCCTTCAAGTAATATGAAACCAAAGAATGAGGATGAAGAG
CTTGATGAGAAGAAGATTTACCGTACCACTTATATGTTCAGTGCTACCATGCCACCTGCT
GTAGAGCGGCTGGCTAGAAATTACTTAAGAAATCCTGCTGTCGTGACTATTGGCACTGCT
GGAAAGGCTACTGACCGCATTACTCAGCATATCTTCATGGTAGAGGAATCTGAGAAAATG
TTTAAGCTGCAGAGGTTTCTGGATGAGCTTGGAGATAAGACTGCTATTGTGTTCATCAAC
TCTAGAAAGCGGGTTGACACAGTTGCCAAGAATCTGGATAAATCCGGCTATAGGGTAACC
ACACTGCATGGTGGGAAATCACAGGAGCAGAGGGAAATCAGCCTTGAAGGATTTAGGACA
AAGAAGTATAATGTGTTAGTTGCTAGTGATGTTGCTGGTCGTGGAATTGATATACCTGAT
GTGGCCCATGTGATTAACTATGATATGCCAAACAAACTTGAAGCATACACCCATCGTATT
GGACGTACAGGTCGTGCAGGAAAGACAGGTGTAGCCACAACATTTTTGACCTTGCAGGAT
ACTGAAGTCTTTTATGATCTTACGCAAATGCTCATCCAAAGCAACAGTCATGTTCCCCCT
GAACTTGCTAGGCACGACGCTTCAAAGCTCAAGCCGGGAAGTATTCCTGGCAGACCACCT
AGGAGGAATGATATTGTTTTTACTCATTAA

Peptide Sequence

PEP ID

PGSC0003DMP400016631
PEP Infomation

pacid=37429029 transcript=PGSC0003DMT400024331 locus=PGSC0003DMG400009407 ID=PGSC0003DMT400024331.v4.03 annot-version=v4.03
Sequence

MTISERSMNRPVGIKPDPSKKPVYLTKAQREQLALQDEIADQKRCHEHLQAKYNCPSSDN
HYCGKNRKRDRDRNSDRDREKEPNRVRLENPAEKELEAIHEQYLGSKKPKKRVITPSAKL
RSSFDWQNSEDTSRDVNPLYQNPHEARPHFGRGFFGGIDRREQKKLAIKNEREMQEEIWK
KGGVEATAVEAAALKKKEQNADLYDTFDMRVDQHWTDKKLEEMTERDWRIFREDYNISYK
GSRIPRPMRNWAESKLTTELLKAVERAGYKKPSPIQMASIPLGLQQRDVIGVAETGSGKT
AAFVLPMLNYITRLPPLSEENEAEGPYAVVMVPTRELAQQIEDETVKFAHYLGIKVVSIV
GGQSIEEQGFRIRQGCEVVIATPGRLLDCLERRYCVMNQCNYVVLDEADRMIDMGFGPQV
VGVLDAMPSSNMKPKNEDEELDEKKIYRTTYMFSATMPPAVERLARNYLRNPAVVTIGTA
GKATDRITQHIFMVEESEKMFKLQRFLDELGDKTAIVFINSRKRVDTVAKNLDKSGYRVT
TLHGGKSQEQREISLEGFRTKKYNVLVASDVAGRGIDIPDVAHVINYDMPNKLEAYTHRI
GRTGRAGKTGVATTFLTLQDTEVFYDLTQMLIQSNSHVPPELARHDASKLKPGSIPGRPP
RRNDIVFTH*

Transcript Sequence

Transcript ID

PGSC0003DMT400024331
Transcript Infomation

pacid=37429029 locus=PGSC0003DMG400009407 ID=PGSC0003DMT400024331.v4.03 annot-version=v4.03
Sequence

ATGACCATATCTGAGAGAAGCATGAACCGGCCCGTCGGAATCAAACCGGATCCGTCCAAG
AAGCCGGTTTACCTCACCAAAGCACAGAGAGAGCAGTTAGCCCTTCAGGACGAGATCGCC
GATCAGAAACGCTGCCACGAACATCTTCAGGCTAAGTACAACTGCCCTTCCTCCGATAAC
CACTATTGCGGCAAGAACCGAAAAAGAGATAGAGACAGGAACAGTGACAGAGATAGAGAG
AAGGAACCGAATCGAGTTAGATTGGAGAATCCGGCAGAGAAGGAACTCGAAGCTATTCAT
GAGCAATATTTGGGATCTAAGAAACCCAAGAAACGGGTGATTACACCCAGTGCAAAACTC
CGATCATCCTTCGACTGGCAGAACTCTGAAGACACTTCTCGTGACGTCAACCCTCTTTAT
CAAAACCCTCACGAAGCCCGTCCACACTTTGGTCGCGGATTCTTCGGTGGAATCGACAGA
AGGGAGCAGAAGAAGCTTGCCATCAAGAATGAGAGGGAGATGCAGGAGGAGATTTGGAAG
AAGGGAGGTGTTGAGGCGACTGCAGTAGAAGCAGCTGCCTTGAAGAAGAAGGAACAAAAT
GCTGATTTGTATGACACTTTTGACATGAGGGTTGATCAACACTGGACAGATAAGAAGCTG
GAGGAAATGACAGAGAGAGATTGGAGGATATTTAGGGAGGATTACAACATATCCTATAAG
GGGTCGAGGATACCCCGTCCCATGAGGAATTGGGCCGAGAGCAAGTTAACTACAGAGTTG
CTTAAGGCCGTTGAGAGGGCTGGCTACAAGAAGCCTTCTCCTATTCAAATGGCTTCCATT
CCACTTGGACTTCAACAACGTGATGTGATTGGTGTAGCAGAGACTGGTTCAGGTAAAACT
GCTGCTTTTGTTCTCCCTATGCTGAATTATATCACTAGGCTTCCTCCATTGAGTGAAGAG
AATGAGGCAGAGGGGCCATATGCGGTTGTAATGGTGCCCACACGAGAACTAGCTCAACAA
ATTGAGGATGAGACCGTCAAGTTTGCACACTATTTGGGTATCAAAGTTGTTTCTATTGTT
GGTGGGCAGTCCATAGAAGAGCAAGGTTTTAGGATTAGGCAAGGCTGTGAAGTTGTGATT
GCAACACCTGGGCGACTTCTCGATTGCTTGGAGAGACGTTATTGTGTTATGAACCAGTGT
AACTATGTTGTTCTTGATGAGGCTGACCGGATGATTGATATGGGTTTTGGACCTCAAGTT
GTTGGTGTACTGGATGCAATGCCTTCAAGTAATATGAAACCAAAGAATGAGGATGAAGAG
CTTGATGAGAAGAAGATTTACCGTACCACTTATATGTTCAGTGCTACCATGCCACCTGCT
GTAGAGCGGCTGGCTAGAAATTACTTAAGAAATCCTGCTGTCGTGACTATTGGCACTGCT
GGAAAGGCTACTGACCGCATTACTCAGCATATCTTCATGGTAGAGGAATCTGAGAAAATG
TTTAAGCTGCAGAGGTTTCTGGATGAGCTTGGAGATAAGACTGCTATTGTGTTCATCAAC
TCTAGAAAGCGGGTTGACACAGTTGCCAAGAATCTGGATAAATCCGGCTATAGGGTAACC
ACACTGCATGGTGGGAAATCACAGGAGCAGAGGGAAATCAGCCTTGAAGGATTTAGGACA
AAGAAGTATAATGTGTTAGTTGCTAGTGATGTTGCTGGTCGTGGAATTGATATACCTGAT
GTGGCCCATGTGATTAACTATGATATGCCAAACAAACTTGAAGCATACACCCATCGTATT
GGACGTACAGGTCGTGCAGGAAAGACAGGTGTAGCCACAACATTTTTGACCTTGCAGGAT
ACTGAAGTCTTTTATGATCTTACGCAAATGCTCATCCAAAGCAACAGTCATGTTCCCCCT
GAACTTGCTAGGCACGACGCTTCAAAGCTCAAGCCGGGAAGTATTCCTGGCAGACCACCT
AGGAGGAATGATATTGTTTTTACTCATTAA