Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400024325
CDS Infomation

pacid=37433609 polypeptide=PGSC0003DMP400016625 locus=PGSC0003DMG400009404 ID=PGSC0003DMT400024325.v4.03 annot-version=v4.03
Sequence

ATGTCAAGTTCCCCAATTCAAGAACCAACCATCGACGACTCTAACAACGCAAACGAACCA
GACAAAGAAAACCCAGACTCACAATTTCAATCTCAACCCCAAATCTTGGAACCCCTTAAT
CCCCAAAACCAAGAAAATCCCATCTCCAGTTCGCAAAATCAAGAGACCCCAGATGTGATT
CTTGAAGAAAAAGACCTAGAAAACCCTCATCAGAAAGCTGAAGTTGTTACGGCTGATGTA
AATGCTGATTTTTGTTTAACTGTGGATCTACCAATTGCAGATACAGAGGTAAGTGTTACT
GACCTTCGAATGATGTCGCCTAGTAATACTAACAAGCGCACTAAGCGGAAGAAGGGTAAA
TGCCACACAAAGAAGTTACAAGCTATTGAGAAAAAATTGCAAACGCTTAAGGAAAACCTA
AAGCCTGTTCCTTTTTTCCCTTCCAAGATTCTTGATTTTGATAGGCATGAGAAGTTACTG
AGGCGTTTGGGGTTGTGGGATTTTGTACATGTAGAGTTTGATAGAGATTTAAGGGTGGAT
TTGATTGCACAGTTGATTGCTACTTATGATTCTAAGTTGAGGGCTAGTTATGTTAATGAT
TTTAGAATTGCGGTTAATAGGGCTGATTTAGGGCGGGCACTTAAGCTGCCTTTGAAGAAG
GACAAAGGTAGTGTTGCTGTGGTTGATGGTATGGACGTGGATGCTGATCCCTTGTCTGAG
GAGTCGATAAGCTTTCTTGAGAACTTTGTGTCAATTTGGGTGCTTTTGCATGAGGACGCG
TGGATAATGCCTAATGAGGTATTAAGTTGGACTAAGGCTATAAAAGATGGGCACCCTGAG
AAAGTGGATTGGGCTGGATTGTTCTGGTTCATGGTGGAGAAGGAATTGACACAAGGGGAC
CAGTTAGTGGACTGTTATTATGCTGCACATTTGCAATACTTGATAAAGTCACAGCGTGAG
CAGGTGTTGTATAGTGAAGAGCCAGAAAAGGTGGAGTTTGAAGCTGATGTGAAGGAGGAG
GATGACTGTGGTAATGAGGACAATGCAAGAGTCGGTGGGTCAATCGAAGCTCAAGAATTG
GATGGAGCTTTAGGGGAGGAACTGAGTATTGAGTTGACGTTGGGTCAGGATCTTGGCCAG
AAGCAAGAGGTGAAGGATGTGGAGATGATGGATGTTGAGGAACACAAGGAAGAGAAGGAG
GTGGAGGAAGAGGAAGAGGAAGAGAAACAGTGGCTTTTTGATGAAAGAAAAGATGCTAAC
GAGCCTTTGTTACAGAGATGTAAGATGCAGGAAGCAGTGTCTTTGGATAATGATGAGGAG
AAGAAAGAAAACCATGAGTTGGCAGATGACAATGACAACGACACTAACAATGACAATGAT
AATGATAATGATAATGATAATGTGAATGATGATGATGCTGAGGAGGATGAAGGAGCAGAG
AGGCATGAGGTTGAAGATGAATTTGATGTTATTCCTAGTAATGGTACTCTTGTTGGGGAT
GGATTGACAGGAAATCTACTTCAAACGATGGAAAGTACACAGATTGGATTTACTTCACAG
GGGCAACTTCATGATCAGTCTTCAGTTGAGCTTCTCGCTACTAGAGATGAGATGCATACA
GGTGGTCCCTTTTTTGGCAGTGGAAGTAAGAGAGAGATGGAGATTGAGCCTGATGTGGCT
CATCATTCTCTCCATGGCAGCAGCAAGAGGTTGAGGATTGAGGGGGAATGGGACGAGAAG
CCATTAGATTTTGGATCATGCATGGAGCAAATGCAGCATCTAATGATGAAGGCTAGGATG
ATGTATGAAGCAAAGGAACAAAATGAGGATCAACTAAACATAAACCAGCAAATTTTTCTT
AGCGAAGTGCATAAAAGGGACAGCGTAATTGATCACTTGCATAAGTCTAAATGTGAGGAA
ATACAAAAAAGGGATGGAGATATTTGTCGTCTTGAACGGGAACTTTTTATGATGGGAAAT
ATTTTGGATGGTTACAGGAAGGCATTGAAGGAAACCCAGAAACAGTTCTCTGAGTATAGG
AAAAAATTCCAGCTGTCTGAAGAACCATACTACAAAGATGCTGGTCCTGGAGGTCTAATG
TTGAGCTCTGCTGAAATGGAAAAGCTACGCCTCAAGCAAGAGGAAGAAACTCGATCCAAT
TGCTTGTTCTTGGAACAAAAAGCAAAAGAAGCAGAGGAAGAATATGCTGGTCAGTTTGAG
AATTTTATGGGTAAGGTTCAGATGCTGGATAAGAGGTTGATGGGCCTTGAGGATATAGTG
AAGGACCTCAGAAACATGAGTCCAAAAAGTAAAGTTCCAGAAAGTGAGGATAAAATTTCA
GAAACTCCCGACTGCCCCGCAGATGAATGA

Peptide Sequence

PEP ID

PGSC0003DMP400016625
PEP Infomation

pacid=37433609 transcript=PGSC0003DMT400024325 locus=PGSC0003DMG400009404 ID=PGSC0003DMT400024325.v4.03 annot-version=v4.03
Sequence

MSSSPIQEPTIDDSNNANEPDKENPDSQFQSQPQILEPLNPQNQENPISSSQNQETPDVI
LEEKDLENPHQKAEVVTADVNADFCLTVDLPIADTEVSVTDLRMMSPSNTNKRTKRKKGK
CHTKKLQAIEKKLQTLKENLKPVPFFPSKILDFDRHEKLLRRLGLWDFVHVEFDRDLRVD
LIAQLIATYDSKLRASYVNDFRIAVNRADLGRALKLPLKKDKGSVAVVDGMDVDADPLSE
ESISFLENFVSIWVLLHEDAWIMPNEVLSWTKAIKDGHPEKVDWAGLFWFMVEKELTQGD
QLVDCYYAAHLQYLIKSQREQVLYSEEPEKVEFEADVKEEDDCGNEDNARVGGSIEAQEL
DGALGEELSIELTLGQDLGQKQEVKDVEMMDVEEHKEEKEVEEEEEEEKQWLFDERKDAN
EPLLQRCKMQEAVSLDNDEEKKENHELADDNDNDTNNDNDNDNDNDNVNDDDAEEDEGAE
RHEVEDEFDVIPSNGTLVGDGLTGNLLQTMESTQIGFTSQGQLHDQSSVELLATRDEMHT
GGPFFGSGSKREMEIEPDVAHHSLHGSSKRLRIEGEWDEKPLDFGSCMEQMQHLMMKARM
MYEAKEQNEDQLNINQQIFLSEVHKRDSVIDHLHKSKCEEIQKRDGDICRLERELFMMGN
ILDGYRKALKETQKQFSEYRKKFQLSEEPYYKDAGPGGLMLSSAEMEKLRLKQEEETRSN
CLFLEQKAKEAEEEYAGQFENFMGKVQMLDKRLMGLEDIVKDLRNMSPKSKVPESEDKIS
ETPDCPADE*

Transcript Sequence

Transcript ID

PGSC0003DMT400024325
Transcript Infomation

pacid=37433609 locus=PGSC0003DMG400009404 ID=PGSC0003DMT400024325.v4.03 annot-version=v4.03
Sequence

ATGTCAAGTTCCCCAATTCAAGAACCAACCATCGACGACTCTAACAACGCAAACGAACCA
GACAAAGAAAACCCAGACTCACAATTTCAATCTCAACCCCAAATCTTGGAACCCCTTAAT
CCCCAAAACCAAGAAAATCCCATCTCCAGTTCGCAAAATCAAGAGACCCCAGATGTGATT
CTTGAAGAAAAAGACCTAGAAAACCCTCATCAGAAAGCTGAAGTTGTTACGGCTGATGTA
AATGCTGATTTTTGTTTAACTGTGGATCTACCAATTGCAGATACAGAGGTAAGTGTTACT
GACCTTCGAATGATGTCGCCTAGTAATACTAACAAGCGCACTAAGCGGAAGAAGGGTAAA
TGCCACACAAAGAAGTTACAAGCTATTGAGAAAAAATTGCAAACGCTTAAGGAAAACCTA
AAGCCTGTTCCTTTTTTCCCTTCCAAGATTCTTGATTTTGATAGGCATGAGAAGTTACTG
AGGCGTTTGGGGTTGTGGGATTTTGTACATGTAGAGTTTGATAGAGATTTAAGGGTGGAT
TTGATTGCACAGTTGATTGCTACTTATGATTCTAAGTTGAGGGCTAGTTATGTTAATGAT
TTTAGAATTGCGGTTAATAGGGCTGATTTAGGGCGGGCACTTAAGCTGCCTTTGAAGAAG
GACAAAGGTAGTGTTGCTGTGGTTGATGGTATGGACGTGGATGCTGATCCCTTGTCTGAG
GAGTCGATAAGCTTTCTTGAGAACTTTGTGTCAATTTGGGTGCTTTTGCATGAGGACGCG
TGGATAATGCCTAATGAGGTATTAAGTTGGACTAAGGCTATAAAAGATGGGCACCCTGAG
AAAGTGGATTGGGCTGGATTGTTCTGGTTCATGGTGGAGAAGGAATTGACACAAGGGGAC
CAGTTAGTGGACTGTTATTATGCTGCACATTTGCAATACTTGATAAAGTCACAGCGTGAG
CAGGTGTTGTATAGTGAAGAGCCAGAAAAGGTGGAGTTTGAAGCTGATGTGAAGGAGGAG
GATGACTGTGGTAATGAGGACAATGCAAGAGTCGGTGGGTCAATCGAAGCTCAAGAATTG
GATGGAGCTTTAGGGGAGGAACTGAGTATTGAGTTGACGTTGGGTCAGGATCTTGGCCAG
AAGCAAGAGGTGAAGGATGTGGAGATGATGGATGTTGAGGAACACAAGGAAGAGAAGGAG
GTGGAGGAAGAGGAAGAGGAAGAGAAACAGTGGCTTTTTGATGAAAGAAAAGATGCTAAC
GAGCCTTTGTTACAGAGATGTAAGATGCAGGAAGCAGTGTCTTTGGATAATGATGAGGAG
AAGAAAGAAAACCATGAGTTGGCAGATGACAATGACAACGACACTAACAATGACAATGAT
AATGATAATGATAATGATAATGTGAATGATGATGATGCTGAGGAGGATGAAGGAGCAGAG
AGGCATGAGGTTGAAGATGAATTTGATGTTATTCCTAGTAATGGTACTCTTGTTGGGGAT
GGATTGACAGGAAATCTACTTCAAACGATGGAAAGTACACAGATTGGATTTACTTCACAG
GGGCAACTTCATGATCAGTCTTCAGTTGAGCTTCTCGCTACTAGAGATGAGATGCATACA
GGTGGTCCCTTTTTTGGCAGTGGAAGTAAGAGAGAGATGGAGATTGAGCCTGATGTGGCT
CATCATTCTCTCCATGGCAGCAGCAAGAGGTTGAGGATTGAGGGGGAATGGGACGAGAAG
CCATTAGATTTTGGATCATGCATGGAGCAAATGCAGCATCTAATGATGAAGGCTAGGATG
ATGTATGAAGCAAAGGAACAAAATGAGGATCAACTAAACATAAACCAGCAAATTTTTCTT
AGCGAAGTGCATAAAAGGGACAGCGTAATTGATCACTTGCATAAGTCTAAATGTGAGGAA
ATACAAAAAAGGGATGGAGATATTTGTCGTCTTGAACGGGAACTTTTTATGATGGGAAAT
ATTTTGGATGGTTACAGGAAGGCATTGAAGGAAACCCAGAAACAGTTCTCTGAGTATAGG
AAAAAATTCCAGCTGTCTGAAGAACCATACTACAAAGATGCTGGTCCTGGAGGTCTAATG
TTGAGCTCTGCTGAAATGGAAAAGCTACGCCTCAAGCAAGAGGAAGAAACTCGATCCAAT
TGCTTGTTCTTGGAACAAAAAGCAAAAGAAGCAGAGGAAGAATATGCTGGTCAGTTTGAG
AATTTTATGGGTAAGGTTCAGATGCTGGATAAGAGGTTGATGGGCCTTGAGGATATAGTG
AAGGACCTCAGAAACATGAGTCCAAAAAGTAAAGTTCCAGAAAGTGAGGATAAAATTTCA
GAAACTCCCGACTGCCCCGCAGATGAATGA