Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400024289
CDS Infomation

pacid=37432690 polypeptide=PGSC0003DMP400016592 locus=PGSC0003DMG400009388 ID=PGSC0003DMT400024289.v4.03 annot-version=v4.03
Sequence

ATGGCACAACTACCTCCTAGAGTACCAAACATGATTAAAAATTGGCCTGATTTTTCACCA
CATCAAAAAATCGAAACCACTACTGTCAATCACCATCATCAGAACCCGTCATGGGTAGAT
GAATTCCTCGACTTCTCATCATCAAAACGAGGGTCTCATCGGAGATCCATTAGCGATTCC
ATCGCGTTTCTCGAAGCTCCAATGGTTGAAGAATGCCGAATTAGGCTATCGAGTTCGGGT
ACTCGCACGGAATTCGATAGATTCGACGATGAACAACTTATGTCTATGTTTAATAATGAC
GACATTGCAAATAATAATGAACACAATTCCAATCCTTCGTCCCCTTCGGATCATAACAGT
ATTAATCACGAAGAAAAGAAAATTATTCATGGAGAGGAGCAGCCACAACAGCTTAAGATT
GAACCTGAAGAAGTTGAAAGTTCATGCAAATCTGATAATGAACAAAATGCTGCTGCTGAT
GATGATCATGTTGATAATTCTAGCAAAAAAATCGTCGATCCGAAGAGAATTAAAAGGATC
TTGGCAAATAGACAATCAGCACAAAGGTCACGGGTGAGGAAATTACAGTACATATCAGAG
CTAGAACGTAGCGTTACTACACTTCAAGCTGAAGTTTCAGTATTGTCACCAAGAGTTGCA
TTTTTGGACCACCAACGTTTGGTTCTAAATGTTGATAATAGTGTCCTCAAGCAAAGAATT
GCAGCTCTTGCCCAAGATAAAATATTTAAAGATGCTCATCAAGAAGCATTGAAGAGAGAA
ATAGAGAGGTTGAGGGAAATATATTACCAACAGAACTTAAAGAAGATGGAAAATGATGAT
GATGATGAACACCCAATAAAGACACAACAAGATGTTAATGGCTCTGAGAAGAAAGAACAG
CTTGTCAACTGA

Peptide Sequence

PEP ID

PGSC0003DMP400016592
PEP Infomation

pacid=37432690 transcript=PGSC0003DMT400024289 locus=PGSC0003DMG400009388 ID=PGSC0003DMT400024289.v4.03 annot-version=v4.03
Sequence

MAQLPPRVPNMIKNWPDFSPHQKIETTTVNHHHQNPSWVDEFLDFSSSKRGSHRRSISDS
IAFLEAPMVEECRIRLSSSGTRTEFDRFDDEQLMSMFNNDDIANNNEHNSNPSSPSDHNS
INHEEKKIIHGEEQPQQLKIEPEEVESSCKSDNEQNAAADDDHVDNSSKKIVDPKRIKRI
LANRQSAQRSRVRKLQYISELERSVTTLQAEVSVLSPRVAFLDHQRLVLNVDNSVLKQRI
AALAQDKIFKDAHQEALKREIERLREIYYQQNLKKMENDDDDEHPIKTQQDVNGSEKKEQ
LVN*

Transcript Sequence

Transcript ID

PGSC0003DMT400024289
Transcript Infomation

pacid=37432690 locus=PGSC0003DMG400009388 ID=PGSC0003DMT400024289.v4.03 annot-version=v4.03
Sequence

ATGGCACAACTACCTCCTAGAGTACCAAACATGATTAAAAATTGGCCTGATTTTTCACCA
CATCAAAAAATCGAAACCACTACTGTCAATCACCATCATCAGAACCCGTCATGGGTAGAT
GAATTCCTCGACTTCTCATCATCAAAACGAGGGTCTCATCGGAGATCCATTAGCGATTCC
ATCGCGTTTCTCGAAGCTCCAATGGTTGAAGAATGCCGAATTAGGCTATCGAGTTCGGGT
ACTCGCACGGAATTCGATAGATTCGACGATGAACAACTTATGTCTATGTTTAATAATGAC
GACATTGCAAATAATAATGAACACAATTCCAATCCTTCGTCCCCTTCGGATCATAACAGT
ATTAATCACGAAGAAAAGAAAATTATTCATGGAGAGGAGCAGCCACAACAGCTTAAGATT
GAACCTGAAGAAGTTGAAAGTTCATGCAAATCTGATAATGAACAAAATGCTGCTGCTGAT
GATGATCATGTTGATAATTCTAGCAAAAAAATCGTCGATCCGAAGAGAATTAAAAGGATC
TTGGCAAATAGACAATCAGCACAAAGGTCACGGGTGAGGAAATTACAGTACATATCAGAG
CTAGAACGTAGCGTTACTACACTTCAAGCTGAAGTTTCAGTATTGTCACCAAGAGTTGCA
TTTTTGGACCACCAACGTTTGGTTCTAAATGTTGATAATAGTGTCCTCAAGCAAAGAATT
GCAGCTCTTGCCCAAGATAAAATATTTAAAGATGCTCATCAAGAAGCATTGAAGAGAGAA
ATAGAGAGGTTGAGGGAAATATATTACCAACAGAACTTAAAGAAGATGGAAAATGATGAT
GATGATGAACACCCAATAAAGACACAACAAGATGTTAATGGCTCTGAGAAGAAAGAACAG
CTTGTCAACTGA