Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400024215
CDS Infomation

pacid=37473925 polypeptide=PGSC0003DMP400016541 locus=PGSC0003DMG400009356 ID=PGSC0003DMT400024215.v4.03 annot-version=v4.03
Sequence

ATGGCGAACAACGAGAGCATCAGAAGTGTGACAAGTTGTTATGTTTTCAAAAGCCGATTG
CAAGAGTATGCGCAGAAAGTTGGACTTCCTACCCCTGTTTATGAGACTATCAAGGAAGGC
CCTTCTCATGAGCCTACATTTACGTCTACAGTGATTGTGGACAATGTTAGATATGATTCT
CTACCTGGATTTTACAATCGCAAGGCGGCGGAGCAATCAGCTGCTGAAGTTGCACTCATG
AGTCTTGGAAACACTGGGTCAATGGAAAACCTTTCTCAGCCAGTGCATGAAACAGGCTTG
TGCAAAAATTTGTTGCAAGAGTATGCTCAGAAGATGAATTTTGCAATCCCACAATATGAA
TGCGAGAGGTATGACTCAGAAAGCAAAATTATATCATTTTCATGTACTGTTGACGTAGGG
GGAATGAAATATATTGGAGCAGCAGCTAGAACAAAGAAGGAAGCAGAGATCAAAGCTGCT
CGAACTGCATTGTTGGCCGTTCAGTCTAGCGGTTTTGCGCCTAACTATTCTTCATACACT
GTTGTTCCAATGAAGAAGGTCACAGATTTGGCAATCAGCAACCAGGAGAGTGCAGCAGCT
CTGAAACCAAAGAAAAACAGATTCAAGAAAAAGCAGACGAGGAATGTTTCAGATGCCAGT
TATCGTGTACGCACAAAGAACACTGGTGACTCGGAAGTTCAGATGGTAAATCAAGCTAAA
CCAGAGATGCATGAAAATGCTGCTGTGATGACTCAAGGTACAGGATCTGGACCTGCACCT
TTTGCAGGCACTATGGGTGATCTAGTTCCATCCAACAATTTGAGTTCTGATTATGGAACT
TCAAATCTTGGAATCAACTCTCAGTGTGGTGGAGGAGTTACGACTGAGGGAAATGCTGTT
ATTGGAGTTGAGCAGGTAACTTCAGAGTTGGCACCAGTTGCTTGGAATGACAACCTTCAT
GTACAGGACCTGCCCCTTTTGCATGAAAATGCTGCTGTGATGACTCAAGGTACAGGATCT
GGACCTGCACCTTTTGCAGACACTATGGGTGATCTAGTTCCATCCAACAATTGTGGTTCT
GATTTTGGAACATCAAACCTTGGAATCAACTCTCAGTGTGGTGGAGGAGTTACAACTGAG
GGAAATGCCGGTATTGGAGTTGAGCAGGTAACTTCAGAGGTGGCACCAGTTGCTTGTAAC
GACAACCTTCATGTGCTATAG

Peptide Sequence

PEP ID

PGSC0003DMP400016541
PEP Infomation

pacid=37473925 transcript=PGSC0003DMT400024215 locus=PGSC0003DMG400009356 ID=PGSC0003DMT400024215.v4.03 annot-version=v4.03
Sequence

MANNESIRSVTSCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFTSTVIVDNVRYDS
LPGFYNRKAAEQSAAEVALMSLGNTGSMENLSQPVHETGLCKNLLQEYAQKMNFAIPQYE
CERYDSESKIISFSCTVDVGGMKYIGAAARTKKEAEIKAARTALLAVQSSGFAPNYSSYT
VVPMKKVTDLAISNQESAAALKPKKNRFKKKQTRNVSDASYRVRTKNTGDSEVQMVNQAK
PEMHENAAVMTQGTGSGPAPFAGTMGDLVPSNNLSSDYGTSNLGINSQCGGGVTTEGNAV
IGVEQVTSELAPVAWNDNLHVQDLPLLHENAAVMTQGTGSGPAPFADTMGDLVPSNNCGS
DFGTSNLGINSQCGGGVTTEGNAGIGVEQVTSEVAPVACNDNLHVL*

Transcript Sequence

Transcript ID

PGSC0003DMT400024215
Transcript Infomation

pacid=37473925 locus=PGSC0003DMG400009356 ID=PGSC0003DMT400024215.v4.03 annot-version=v4.03
Sequence

ATGGCGAACAACGAGAGCATCAGAAGTGTGACAAGTTGTTATGTTTTCAAAAGCCGATTG
CAAGAGTATGCGCAGAAAGTTGGACTTCCTACCCCTGTTTATGAGACTATCAAGGAAGGC
CCTTCTCATGAGCCTACATTTACGTCTACAGTGATTGTGGACAATGTTAGATATGATTCT
CTACCTGGATTTTACAATCGCAAGGCGGCGGAGCAATCAGCTGCTGAAGTTGCACTCATG
AGTCTTGGAAACACTGGGTCAATGGAAAACCTTTCTCAGCCAGTGCATGAAACAGGCTTG
TGCAAAAATTTGTTGCAAGAGTATGCTCAGAAGATGAATTTTGCAATCCCACAATATGAA
TGCGAGAGGTATGACTCAGAAAGCAAAATTATATCATTTTCATGTACTGTTGACGTAGGG
GGAATGAAATATATTGGAGCAGCAGCTAGAACAAAGAAGGAAGCAGAGATCAAAGCTGCT
CGAACTGCATTGTTGGCCGTTCAGTCTAGCGGTTTTGCGCCTAACTATTCTTCATACACT
GTTGTTCCAATGAAGAAGGTCACAGATTTGGCAATCAGCAACCAGGAGAGTGCAGCAGCT
CTGAAACCAAAGAAAAACAGATTCAAGAAAAAGCAGACGAGGAATGTTTCAGATGCCAGT
TATCGTGTACGCACAAAGAACACTGGTGACTCGGAAGTTCAGATGGTAAATCAAGCTAAA
CCAGAGATGCATGAAAATGCTGCTGTGATGACTCAAGGTACAGGATCTGGACCTGCACCT
TTTGCAGGCACTATGGGTGATCTAGTTCCATCCAACAATTTGAGTTCTGATTATGGAACT
TCAAATCTTGGAATCAACTCTCAGTGTGGTGGAGGAGTTACGACTGAGGGAAATGCTGTT
ATTGGAGTTGAGCAGGTAACTTCAGAGTTGGCACCAGTTGCTTGGAATGACAACCTTCAT
GTACAGGACCTGCCCCTTTTGCATGAAAATGCTGCTGTGATGACTCAAGGTACAGGATCT
GGACCTGCACCTTTTGCAGACACTATGGGTGATCTAGTTCCATCCAACAATTGTGGTTCT
GATTTTGGAACATCAAACCTTGGAATCAACTCTCAGTGTGGTGGAGGAGTTACAACTGAG
GGAAATGCCGGTATTGGAGTTGAGCAGGTAACTTCAGAGGTGGCACCAGTTGCTTGTAAC
GACAACCTTCATGTGCTATAG