Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400024213
CDS Infomation

pacid=37476021 polypeptide=PGSC0003DMP400016539 locus=PGSC0003DMG400009355 ID=PGSC0003DMT400024213.v4.03 annot-version=v4.03
Sequence

ATGCACGGAAGACCACGCAAAGCTCCAACTCCAGAAGAGCAAGAAGCTTTTAGTGTCAAA
GCTTCCAAATTACGGTCTCTACAATCACAATTTCTCCAATTTCATCACGCCAAAATATAT
ACAAAGGAAGCTTTAGATGTAAGTGCAAAGTTGTTAGAGTCAAATCCTGAGTATTATACT
GCTTGGAATTATAGAAAACTTGCTGTCCAGCATAATTTGAATCTACCTGAGGTGGAGAAC
AATGAGGAGTCTGTTAAGTCAATTCTCGATGAAGAACTCAGACTGGTAGAGAATGCATTA
AAGAGGAATTTCAAGTCTTACGGAGCATGGCATCACCGTAAGTGGGTGTTGAGCAAAGGG
CATTCTTCCACAGACAGGGAATTGTTGCTTCTGGGTAAGTTCCAGAAGGCAGACGCCCGC
AACTTTCATGCATGGAATTATAGAAGGTTTGTCACAACATTAAAGAACATACCAAATGAG
AAGGAACTAGAATACACTACCGACATGATATATGATAATTTCAGCAACTATTCTGCTTGG
CACAACCGCAGTGTTCTTCTTTCTCATCTGCTGAAGGAAAAAGCAAAAGGATATTGTCCC
AAGGACAATGTATTTACAGAAGAGTATGAGTTTGTGCGCCATGCTCTTTTCACAGATCCA
GATGATCAAAGTGGTTGGTTTTATCATCTGTGGCTTCTTGATCAGACAGTTAAACTAGAG
ACATTGTTGGTTTCTTCATGGCCACCACATGGCAGTAATCTTTCCTTATCCGTGGATGGA
TCGTTTGGAGATTGCTCTTTATCACCCTTTACCAGTCTTCAGACTAATACTAGAATACTT
CCACTTGTTCTCTATTTCAGCGAAGCTGTTGAGAATGTATGTTCATCTACAGTAGTAATC
GAATGTGAAAATATTGCGAGTAATGAGCTCGTTTGGAGATCACTTTCAGGAGATGGAACT
GGGTCTGCTCAAGCTTGGTTGACATATCTTAATTTTCCAGAGGAACATGCACATTCTGAA
AAGGCTTACCAAGTAAAGGTCAGCCTTGCTCGTTCTCAAGGCATTTTCTCTTCAACTGGC
GTTCATCATGGAGATTCTTCTCATATTGAATTTTCAGTGTCTGTACCACCTTATCGTTCA
GAACATGTTGATTTGAAAAATGAAGGGAAGATCTCTTGGAGTGATGAAAGTTTCTGCACT
CATGACGCCCAGTTTCTTGAGTCAGTTCTGGTTAACTTGTTCCATCTAGAAAGAACCAAG
ATAGATGAAACAGTGGTGGACTATCAGTGGAATATAACGACCATCAATAATGAGATATCA
CACTGTAGGGAGTTGTTATCAACAATGAACTGTAAAATCGGGAAGTTAACACTTGCCAGA
CTGCTGATGGCCCATGACACCTTAATGTCATATGCTGGCACTAGTCATAGAAATGTTAGC
CCCCATGCAGAAATTCTTCAACTATATGACGATTTAAAGAATATGGACCCAGCACATCTC
CACTACTACCAGGATGAATACAGCATAGTACTTCTGAAACAGATAATCTCCAATCAAGAA
TTGTTGCTGAAGCACTGCCGTGAATATAGGGATCCATATTTTCCAAGAATCAATAATTTC
TGTCTGCGATTTAATAATCTTTCACTTTCACGTATTGGGTCTATGGAGCAACTTTTGTGG
GTCCAAGTCTTAGATCTCAGCTACAACCAACTTAAGACACTTGAAGGCTTGGAGGTGATG
CAACTTCTCTCCTGCTTGAATGTCAGCTACAATAAACTCTGCAGTTTTACTGCATTGGAA
CCTTTGAAACTGCTAAGGTCACTGAAAGTCTTAGATATCTCTTACAACGAGATTGGAGCA
CATTCTATTGACACGAGGAGGTATTTGTGCTCTTCCCCTCTTAACCATAGAAGTGGAGGT
GACTGGAAAACTGAAGAATCTGAGATCCATTGCGCTGAGGTGGCTGATTATTGGGAAGCC
TATGCTATTTTTAAAGACTTGAACTTGATACAATTAGATCTTAAAGGAAATGCAGTTTCC
AATGAAAAGATAAAATCACTTCTAATTAAGCTATTACCGTCACTAAAGTGGCTTGATGGT
GAAAGTTGCCGATAA

Peptide Sequence

PEP ID

PGSC0003DMP400016539
PEP Infomation

pacid=37476021 transcript=PGSC0003DMT400024213 locus=PGSC0003DMG400009355 ID=PGSC0003DMT400024213.v4.03 annot-version=v4.03
Sequence

MHGRPRKAPTPEEQEAFSVKASKLRSLQSQFLQFHHAKIYTKEALDVSAKLLESNPEYYT
AWNYRKLAVQHNLNLPEVENNEESVKSILDEELRLVENALKRNFKSYGAWHHRKWVLSKG
HSSTDRELLLLGKFQKADARNFHAWNYRRFVTTLKNIPNEKELEYTTDMIYDNFSNYSAW
HNRSVLLSHLLKEKAKGYCPKDNVFTEEYEFVRHALFTDPDDQSGWFYHLWLLDQTVKLE
TLLVSSWPPHGSNLSLSVDGSFGDCSLSPFTSLQTNTRILPLVLYFSEAVENVCSSTVVI
ECENIASNELVWRSLSGDGTGSAQAWLTYLNFPEEHAHSEKAYQVKVSLARSQGIFSSTG
VHHGDSSHIEFSVSVPPYRSEHVDLKNEGKISWSDESFCTHDAQFLESVLVNLFHLERTK
IDETVVDYQWNITTINNEISHCRELLSTMNCKIGKLTLARLLMAHDTLMSYAGTSHRNVS
PHAEILQLYDDLKNMDPAHLHYYQDEYSIVLLKQIISNQELLLKHCREYRDPYFPRINNF
CLRFNNLSLSRIGSMEQLLWVQVLDLSYNQLKTLEGLEVMQLLSCLNVSYNKLCSFTALE
PLKLLRSLKVLDISYNEIGAHSIDTRRYLCSSPLNHRSGGDWKTEESEIHCAEVADYWEA
YAIFKDLNLIQLDLKGNAVSNEKIKSLLIKLLPSLKWLDGESCR*

Transcript Sequence

Transcript ID

PGSC0003DMT400024213
Transcript Infomation

pacid=37476021 locus=PGSC0003DMG400009355 ID=PGSC0003DMT400024213.v4.03 annot-version=v4.03
Sequence

ATGCACGGAAGACCACGCAAAGCTCCAACTCCAGAAGAGCAAGAAGCTTTTAGTGTCAAA
GCTTCCAAATTACGGTCTCTACAATCACAATTTCTCCAATTTCATCACGCCAAAATATAT
ACAAAGGAAGCTTTAGATGTAAGTGCAAAGTTGTTAGAGTCAAATCCTGAGTATTATACT
GCTTGGAATTATAGAAAACTTGCTGTCCAGCATAATTTGAATCTACCTGAGGTGGAGAAC
AATGAGGAGTCTGTTAAGTCAATTCTCGATGAAGAACTCAGACTGGTAGAGAATGCATTA
AAGAGGAATTTCAAGTCTTACGGAGCATGGCATCACCGTAAGTGGGTGTTGAGCAAAGGG
CATTCTTCCACAGACAGGGAATTGTTGCTTCTGGGTAAGTTCCAGAAGGCAGACGCCCGC
AACTTTCATGCATGGAATTATAGAAGGTTTGTCACAACATTAAAGAACATACCAAATGAG
AAGGAACTAGAATACACTACCGACATGATATATGATAATTTCAGCAACTATTCTGCTTGG
CACAACCGCAGTGTTCTTCTTTCTCATCTGCTGAAGGAAAAAGCAAAAGGATATTGTCCC
AAGGACAATGTATTTACAGAAGAGTATGAGTTTGTGCGCCATGCTCTTTTCACAGATCCA
GATGATCAAAGTGGTTGGTTTTATCATCTGTGGCTTCTTGATCAGACAGTTAAACTAGAG
ACATTGTTGGTTTCTTCATGGCCACCACATGGCAGTAATCTTTCCTTATCCGTGGATGGA
TCGTTTGGAGATTGCTCTTTATCACCCTTTACCAGTCTTCAGACTAATACTAGAATACTT
CCACTTGTTCTCTATTTCAGCGAAGCTGTTGAGAATGTATGTTCATCTACAGTAGTAATC
GAATGTGAAAATATTGCGAGTAATGAGCTCGTTTGGAGATCACTTTCAGGAGATGGAACT
GGGTCTGCTCAAGCTTGGTTGACATATCTTAATTTTCCAGAGGAACATGCACATTCTGAA
AAGGCTTACCAAGTAAAGGTCAGCCTTGCTCGTTCTCAAGGCATTTTCTCTTCAACTGGC
GTTCATCATGGAGATTCTTCTCATATTGAATTTTCAGTGTCTGTACCACCTTATCGTTCA
GAACATGTTGATTTGAAAAATGAAGGGAAGATCTCTTGGAGTGATGAAAGTTTCTGCACT
CATGACGCCCAGTTTCTTGAGTCAGTTCTGGTTAACTTGTTCCATCTAGAAAGAACCAAG
ATAGATGAAACAGTGGTGGACTATCAGTGGAATATAACGACCATCAATAATGAGATATCA
CACTGTAGGGAGTTGTTATCAACAATGAACTGTAAAATCGGGAAGTTAACACTTGCCAGA
CTGCTGATGGCCCATGACACCTTAATGTCATATGCTGGCACTAGTCATAGAAATGTTAGC
CCCCATGCAGAAATTCTTCAACTATATGACGATTTAAAGAATATGGACCCAGCACATCTC
CACTACTACCAGGATGAATACAGCATAGTACTTCTGAAACAGATAATCTCCAATCAAGAA
TTGTTGCTGAAGCACTGCCGTGAATATAGGGATCCATATTTTCCAAGAATCAATAATTTC
TGTCTGCGATTTAATAATCTTTCACTTTCACGTATTGGGTCTATGGAGCAACTTTTGTGG
GTCCAAGTCTTAGATCTCAGCTACAACCAACTTAAGACACTTGAAGGCTTGGAGGTGATG
CAACTTCTCTCCTGCTTGAATGTCAGCTACAATAAACTCTGCAGTTTTACTGCATTGGAA
CCTTTGAAACTGCTAAGGTCACTGAAAGTCTTAGATATCTCTTACAACGAGATTGGAGCA
CATTCTATTGACACGAGGAGGTATTTGTGCTCTTCCCCTCTTAACCATAGAAGTGGAGGT
GACTGGAAAACTGAAGAATCTGAGATCCATTGCGCTGAGGTGGCTGATTATTGGGAAGCC
TATGCTATTTTTAAAGACTTGAACTTGATACAATTAGATCTTAAAGGAAATGCAGTTTCC
AATGAAAAGATAAAATCACTTCTAATTAAGCTATTACCGTCACTAAAGTGGCTTGATGGT
GAAAGTTGCCGATAA