Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400024189
CDS Infomation

pacid=37471748 polypeptide=PGSC0003DMP400016521 locus=PGSC0003DMG400009348 ID=PGSC0003DMT400024189.v4.03 annot-version=v4.03
Sequence

ATGATTTCTCAGTTCTTTGTGCTTTCTCAGAGAGGCGATAGCATCGTCTTCCGCGACTAT
CGGGGTGATGTACTGAAAGGAAGTGCAGAGATCTTCTTCCGGAAAGTAAAGTTTTGGAAA
GAAGATGGCGGAGAGGAAGCACCTCCTGTATTTAATGTGGATGGTGTGAACTACTTTCAT
GTGAAGGTAGTTGGTCTGCTTTTTGTAGCAACATCTAGGACAAATTTGTCGCCTTCTCTA
GTGTTGGAGCTTCTCCAGAGGATTGCACGTGTAATCAAAGATTACCTCGGTGTTCTAAAT
GAAGACTCATTGCGGAAAAATTTTGTGCTCGTGTATGAGCTTCTTGATGAAGTTGTTGAT
TTTGGTTATGTGCAAACGACGTCGACAGAAATCTTAAAGTCTTACATATTTAATGAGCCA
ATTATGATTGATGCTGGCCGCTTGCCACCCCTTGGTCCTGCAGCCATGTTCATGCAAGGA
TCCAAAAGAATGCCAGGGACAGCAATTACTAAATCTGTTGTGGCAAATGAACCTGGGGGG
AGAAAGAGGGAGGAGATTTTCGTGGATATAATTGAAAAAATAAGCATTACTTTCAGCTCA
AGTGGATATATATTGACTTCTGAAATTGATGGGACCATTCAAATGAAGAGCTATCTTACT
GGTAATCCAGAAATCAAATTAGCTCTGAATGAGGATCTGGGAATTGGAAGGGCCGGTGGG
AGATCAGATTATGGAGGTTCGGCTGGGTCTGGAGCAGTAGTACTGGATGATTGCAATTTC
CATGAATCTGTGCAACTTGATAGTTTTGATGTGGACAGGACCTTGACTCTGGTTCCACCG
GATGGTGAATTTCCTGTCATGAATTACCGGATAACCCAGGAATTCAAGCCTCCCTTTCGT
ATTAATACTTTGATTGAAGAAGCTGGATCACTTAAGGCAGAAGTTATCTTGAAGATCCGT
GCTGAATTTCCTTCGGACATTACTGCAAATACAATCTTGGTACAAATGCCGCTGCCTACA
TATACAAGCAGAGTAAGCTTTGAGTTGGAACCTGGAACAGTTGGTCAAACAACTGATTTT
AAGGAATCCAATAAGAGGCTTGAGTGGAGTTTGAAGAAGGTTGTCGGTGGATCAGACCAT
ACATTACGTGCCAAGCTAACATTTTCGCAAGAGTCACATGGAAATATCACCAAGGAAGCT
GGACCAGTGAGCATGACCTTCACAATCCCAATGTATAATCCTTCAAGGCTGCAGGTGAAA
TATCTACAAATCGCAAAGAAGTCAAAGACATATAATCCTTATCGGTGGGTGAGATATGTG
ACTCAGGCCAATTCGTATGTTGCTCGTATATGA

Peptide Sequence

PEP ID

PGSC0003DMP400016521
PEP Infomation

pacid=37471748 transcript=PGSC0003DMT400024189 locus=PGSC0003DMG400009348 ID=PGSC0003DMT400024189.v4.03 annot-version=v4.03
Sequence

MISQFFVLSQRGDSIVFRDYRGDVLKGSAEIFFRKVKFWKEDGGEEAPPVFNVDGVNYFH
VKVVGLLFVATSRTNLSPSLVLELLQRIARVIKDYLGVLNEDSLRKNFVLVYELLDEVVD
FGYVQTTSTEILKSYIFNEPIMIDAGRLPPLGPAAMFMQGSKRMPGTAITKSVVANEPGG
RKREEIFVDIIEKISITFSSSGYILTSEIDGTIQMKSYLTGNPEIKLALNEDLGIGRAGG
RSDYGGSAGSGAVVLDDCNFHESVQLDSFDVDRTLTLVPPDGEFPVMNYRITQEFKPPFR
INTLIEEAGSLKAEVILKIRAEFPSDITANTILVQMPLPTYTSRVSFELEPGTVGQTTDF
KESNKRLEWSLKKVVGGSDHTLRAKLTFSQESHGNITKEAGPVSMTFTIPMYNPSRLQVK
YLQIAKKSKTYNPYRWVRYVTQANSYVARI*

Transcript Sequence

Transcript ID

PGSC0003DMT400024189
Transcript Infomation

pacid=37471748 locus=PGSC0003DMG400009348 ID=PGSC0003DMT400024189.v4.03 annot-version=v4.03
Sequence

ATGATTTCTCAGTTCTTTGTGCTTTCTCAGAGAGGCGATAGCATCGTCTTCCGCGACTAT
CGGGGTGATGTACTGAAAGGAAGTGCAGAGATCTTCTTCCGGAAAGTAAAGTTTTGGAAA
GAAGATGGCGGAGAGGAAGCACCTCCTGTATTTAATGTGGATGGTGTGAACTACTTTCAT
GTGAAGGTAGTTGGTCTGCTTTTTGTAGCAACATCTAGGACAAATTTGTCGCCTTCTCTA
GTGTTGGAGCTTCTCCAGAGGATTGCACGTGTAATCAAAGATTACCTCGGTGTTCTAAAT
GAAGACTCATTGCGGAAAAATTTTGTGCTCGTGTATGAGCTTCTTGATGAAGTTGTTGAT
TTTGGTTATGTGCAAACGACGTCGACAGAAATCTTAAAGTCTTACATATTTAATGAGCCA
ATTATGATTGATGCTGGCCGCTTGCCACCCCTTGGTCCTGCAGCCATGTTCATGCAAGGA
TCCAAAAGAATGCCAGGGACAGCAATTACTAAATCTGTTGTGGCAAATGAACCTGGGGGG
AGAAAGAGGGAGGAGATTTTCGTGGATATAATTGAAAAAATAAGCATTACTTTCAGCTCA
AGTGGATATATATTGACTTCTGAAATTGATGGGACCATTCAAATGAAGAGCTATCTTACT
GGTAATCCAGAAATCAAATTAGCTCTGAATGAGGATCTGGGAATTGGAAGGGCCGGTGGG
AGATCAGATTATGGAGGTTCGGCTGGGTCTGGAGCAGTAGTACTGGATGATTGCAATTTC
CATGAATCTGTGCAACTTGATAGTTTTGATGTGGACAGGACCTTGACTCTGGTTCCACCG
GATGGTGAATTTCCTGTCATGAATTACCGGATAACCCAGGAATTCAAGCCTCCCTTTCGT
ATTAATACTTTGATTGAAGAAGCTGGATCACTTAAGGCAGAAGTTATCTTGAAGATCCGT
GCTGAATTTCCTTCGGACATTACTGCAAATACAATCTTGGTACAAATGCCGCTGCCTACA
TATACAAGCAGAGTAAGCTTTGAGTTGGAACCTGGAACAGTTGGTCAAACAACTGATTTT
AAGGAATCCAATAAGAGGCTTGAGTGGAGTTTGAAGAAGGTTGTCGGTGGATCAGACCAT
ACATTACGTGCCAAGCTAACATTTTCGCAAGAGTCACATGGAAATATCACCAAGGAAGCT
GGACCAGTGAGCATGACCTTCACAATCCCAATGTATAATCCTTCAAGGCTGCAGGTGAAA
TATCTACAAATCGCAAAGAAGTCAAAGACATATAATCCTTATCGGTGGGTGAGATATGTG
ACTCAGGCCAATTCGTATGTTGCTCGTATATGA