Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400024177
CDS Infomation

pacid=37472989 polypeptide=PGSC0003DMP400016509 locus=PGSC0003DMG401009344 ID=PGSC0003DMT400024177.v4.03 annot-version=v4.03
Sequence

ATGGCACTTGCCTACTGTTTATCTAGCTTGATTCAGCAAACACAAAAATTCCTCGTGGAG
ACAAAAGACCCTGCTGATGCAAGAAATATGGGGTTCGAATTTGCAGGGAAAGCTGTATAT
ACTGCAGTATGGGTTGCAGCCGTTTCATTGTTCATGGAATTGCTTGGTTTTTCTACACAG
AAGTGGCTGACAGCTGGGGGTCTTGGGACAGTATTGCTCACTCTTGCTGGTCGTGAGATA
CTTACAAACTTCCTCTCGAGCATAATGATCCATGCAACAAGGCCCTTTGTTCTAAATGAC
TGGATACAGACTAAGATACAGGGATATGATGTCTCTGGTACAGTGGAGCACGTAGGTTGG
TGGTCACCAACAGTCATAAGAGGTGATGATCGTGAAGCAATTCACATACCAAATCACAAA
TTTTCAGTGAATATCGTCAGGAATCTTACTCAGAGGACTCACTGGCGGATCAAGACTCAC
CTTGCCATCAGCCACTTGGATGTGAATAAGATCAATAACATTGTTGCGGATATGCGGAAG
GTTTTGGCGAAACATCCTCTAGTGGAACAGCAACGATTACATAGACGAGTTTTTCTGGAT
AACGTTGATCCAGAGAATCAGGCTCTTAAGATATTGATTTCTTGCTTTGTGAAGACTCCT
CGTTTTGAAGAGTACCTCCGAGTGAAGGAAGTTATATTGCTGGATCTCCTTCGAGTAATC
AGCCATCATCGTGCTCGACTTGCTACACCTATTCGTACTGTGCAGAAAACATCTCGTGAG
ATTGATGTGGATGATGTACCATTTGCTGATTCCATTTTTTCTCGTAACCGGCCTAACCGC
CAAGTCCTCCTTATTGAGCCTTCTTATAAGATCAGTAGTGACGATAAAGCCAAAGCTTCT
GCTCGTTCAGTACAATCTGATGAAGAAAAAGACCAAAAGGTTGAAGCACCAAGTACATCA
CGGGGCGCTGATGACACAAATGACAAGCCATCAACTCTTGTTGAGAAGGAAGTCGTTAAG
GCCTCATCAGCATCAAATGCTAATGGTGATTTAAAAGCAGCAACTTCGCCATCAGATGGA
AAATCACTAAAACAAGGATCTGCCAGTCCAGTTAAAAGCAACTCTGAGAAAAACCAAATT
GCTTCAGTTGCTGGAGACCCACCGGGGTTGACATCAGATACAGCCATTGAGAAGACAGAT
ATGGCATCTTCTGCTTCACAGGCACAACAAGATACTGAAAGACCAATTTCTTCACCACCT
TCAGTTGGAAGGCCCATGTTAGAAGACAACATTGTTCTTGGTGTTGCACTGGAAGGGTCA
AAACTAACACTTCCAATTGAGGAAGAAACGACTCCACCCTCTCCCTCTCCAACATTTTTT
GACTCAGAATCAAAAGAGTTAGCTGCCTGCCGGAATGGAAATAGCTCGACCAACTCAAAC
AAAGATAAGACGGACGATAAAATGCCAGGAGCTCCAAGCACACAAAGTACATCAAATGAC
CAGAAAGAACGCGAAAGGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400016509
PEP Infomation

pacid=37472989 transcript=PGSC0003DMT400024177 locus=PGSC0003DMG401009344 ID=PGSC0003DMT400024177.v4.03 annot-version=v4.03
Sequence

MALAYCLSSLIQQTQKFLVETKDPADARNMGFEFAGKAVYTAVWVAAVSLFMELLGFSTQ
KWLTAGGLGTVLLTLAGREILTNFLSSIMIHATRPFVLNDWIQTKIQGYDVSGTVEHVGW
WSPTVIRGDDREAIHIPNHKFSVNIVRNLTQRTHWRIKTHLAISHLDVNKINNIVADMRK
VLAKHPLVEQQRLHRRVFLDNVDPENQALKILISCFVKTPRFEEYLRVKEVILLDLLRVI
SHHRARLATPIRTVQKTSREIDVDDVPFADSIFSRNRPNRQVLLIEPSYKISSDDKAKAS
ARSVQSDEEKDQKVEAPSTSRGADDTNDKPSTLVEKEVVKASSASNANGDLKAATSPSDG
KSLKQGSASPVKSNSEKNQIASVAGDPPGLTSDTAIEKTDMASSASQAQQDTERPISSPP
SVGRPMLEDNIVLGVALEGSKLTLPIEEETTPPSPSPTFFDSESKELAACRNGNSSTNSN
KDKTDDKMPGAPSTQSTSNDQKERER*

Transcript Sequence

Transcript ID

PGSC0003DMT400024177
Transcript Infomation

pacid=37472989 locus=PGSC0003DMG401009344 ID=PGSC0003DMT400024177.v4.03 annot-version=v4.03
Sequence

ATGGCACTTGCCTACTGTTTATCTAGCTTGATTCAGCAAACACAAAAATTCCTCGTGGAG
ACAAAAGACCCTGCTGATGCAAGAAATATGGGGTTCGAATTTGCAGGGAAAGCTGTATAT
ACTGCAGTATGGGTTGCAGCCGTTTCATTGTTCATGGAATTGCTTGGTTTTTCTACACAG
AAGTGGCTGACAGCTGGGGGTCTTGGGACAGTATTGCTCACTCTTGCTGGTCGTGAGATA
CTTACAAACTTCCTCTCGAGCATAATGATCCATGCAACAAGGCCCTTTGTTCTAAATGAC
TGGATACAGACTAAGATACAGGGATATGATGTCTCTGGTACAGTGGAGCACGTAGGTTGG
TGGTCACCAACAGTCATAAGAGGTGATGATCGTGAAGCAATTCACATACCAAATCACAAA
TTTTCAGTGAATATCGTCAGGAATCTTACTCAGAGGACTCACTGGCGGATCAAGACTCAC
CTTGCCATCAGCCACTTGGATGTGAATAAGATCAATAACATTGTTGCGGATATGCGGAAG
GTTTTGGCGAAACATCCTCTAGTGGAACAGCAACGATTACATAGACGAGTTTTTCTGGAT
AACGTTGATCCAGAGAATCAGGCTCTTAAGATATTGATTTCTTGCTTTGTGAAGACTCCT
CGTTTTGAAGAGTACCTCCGAGTGAAGGAAGTTATATTGCTGGATCTCCTTCGAGTAATC
AGCCATCATCGTGCTCGACTTGCTACACCTATTCGTACTGTGCAGAAAACATCTCGTGAG
ATTGATGTGGATGATGTACCATTTGCTGATTCCATTTTTTCTCGTAACCGGCCTAACCGC
CAAGTCCTCCTTATTGAGCCTTCTTATAAGATCAGTAGTGACGATAAAGCCAAAGCTTCT
GCTCGTTCAGTACAATCTGATGAAGAAAAAGACCAAAAGGTTGAAGCACCAAGTACATCA
CGGGGCGCTGATGACACAAATGACAAGCCATCAACTCTTGTTGAGAAGGAAGTCGTTAAG
GCCTCATCAGCATCAAATGCTAATGGTGATTTAAAAGCAGCAACTTCGCCATCAGATGGA
AAATCACTAAAACAAGGATCTGCCAGTCCAGTTAAAAGCAACTCTGAGAAAAACCAAATT
GCTTCAGTTGCTGGAGACCCACCGGGGTTGACATCAGATACAGCCATTGAGAAGACAGAT
ATGGCATCTTCTGCTTCACAGGCACAACAAGATACTGAAAGACCAATTTCTTCACCACCT
TCAGTTGGAAGGCCCATGTTAGAAGACAACATTGTTCTTGGTGTTGCACTGGAAGGGTCA
AAACTAACACTTCCAATTGAGGAAGAAACGACTCCACCCTCTCCCTCTCCAACATTTTTT
GACTCAGAATCAAAAGAGTTAGCTGCCTGCCGGAATGGAAATAGCTCGACCAACTCAAAC
AAAGATAAGACGGACGATAAAATGCCAGGAGCTCCAAGCACACAAAGTACATCAAATGAC
CAGAAAGAACGCGAAAGGTGA