Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400024171
CDS Infomation

pacid=37475667 polypeptide=PGSC0003DMP400016504 locus=PGSC0003DMG400009343 ID=PGSC0003DMT400024171.v4.03 annot-version=v4.03
Sequence

ATGGAGTCACTGTTAATTTCTTCCTCTTCTTCTTTGACAACATCCCCCATTTTCTCTTCA
TCCAAACACGCCCTTACTCCTAAACCCCAAAACCTCACCTTCAACTCCAATGCTCGCTTA
GTATTGCTCACCTGTGCAGCGCAGCAGATGAATTCACCACCCTCTACGGCGGCGAAGGAA
AAGGAGGTGAAGCTATGGGGTGGCCGTTTCGAAGAGAGCGTCACCGATGCTGTGGAGAAG
TTCACTGAGTCCATTTCGTTTGATAAAGCTCTCTATAAACAGGATATCATGGGTAGTAAA
GCTCATGCCTCAATGCTCGCTAAACAGGGATTGATGAGTGATAGTGATAGAGATACTATC
ATAAAAGGTCTTGACGAGATACAGAGGCAAATTGAGGCAGGTGAATTTGTATGGAGGACA
GATAGAGAGGATGTGCATATGAACATTGAAGCAGCGCTTACTGATTTGGTTGGTGAACCT
GCCAAAAAGCTTCACACTGCGCGGAGTAGAAATGATCAAGTTGCAACTGACTTTCGCTTG
TGGTGTCGTGATGCTATTGACGGAATCATTTCACGCATTAAGAATCTTCAGATTGCAATG
GTTGAACTAGCTCTCCAAAATGAGGGTCTTATTGTTCCTGGATACACTCATCTGCAAAGG
GCCCAACCTGTTCTGTTGCAACACCTTCTCTTAGCATATGTTGAACAGCTTGAGCGTGAT
GCTGGTCGCTTATTAGATTGTAGAGCAAGGGTGAATTTCTGCCCTCTAGGTGCATGTGCA
TTAGCTGGCACTGGTCTTCCCATTGATAGGTTTATGACTTCTGATGCATTGGGATTCACT
GCCCCCATGAGGAACAGCATTGATGCAGTTTCAGATCGAGATTTTGTGCTGGAGTTACTT
TCTGCTAATTCCATCACTGCTGTTCATCTCTCTCGCCTGGGTGAAGAATGGGTATTGTGG
GCATCTGAAGAATTTGGCTTCTTGACCCCTAGTGATAAAGTTTCCACTGGAAGCAGTATA
ATGCCCCAAAAGAAGAATCCAGATCCAATGGAGCTTGTTCGTGGAAAATCTGCTAGAGTC
ATAGGGGACTTAGTTTCACTTCTTGTGTTGTGCAAGGGACTTCCCCATGCTTACAACCGA
GATTTGCAGGAAGATAAGGAGCCTGTATTTGACAGTGTCAAGGCAATAGTTGGGATGCTC
GAAGTCTCAGCAGAGTTTGCGCAGAATGTTTCCTTTAACCGAGAAAGGATACAAAAGGCT
CTACCAGCTGGTCATCTTGATGCCACTACACTCGCTGATTACCTTGTGAAAAAGGGAATA
CCTTTCAGAACTTCTCATGACATAGTTGGGAGGTCTGTCGCTTTGTGTGTTTCCAGAAAC
TGCGAGCTTCAAGACCTTAGCCTTGACGAGTTGAACAGTCTAAATCCGATATTTGACAAG
GATGTCTACGAATATCTAGGGGTTGAAAATTCAATTAAAAAATTCAGGTCATATGGCTCC
ACAGGTTCAGAATGTGTTGCTGGTCAGCTTGATTACTGGATGGATAAGCTAAGTATCAGC
AGAGAGAGGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400016504
PEP Infomation

pacid=37475667 transcript=PGSC0003DMT400024171 locus=PGSC0003DMG400009343 ID=PGSC0003DMT400024171.v4.03 annot-version=v4.03
Sequence

MESLLISSSSSLTTSPIFSSSKHALTPKPQNLTFNSNARLVLLTCAAQQMNSPPSTAAKE
KEVKLWGGRFEESVTDAVEKFTESISFDKALYKQDIMGSKAHASMLAKQGLMSDSDRDTI
IKGLDEIQRQIEAGEFVWRTDREDVHMNIEAALTDLVGEPAKKLHTARSRNDQVATDFRL
WCRDAIDGIISRIKNLQIAMVELALQNEGLIVPGYTHLQRAQPVLLQHLLLAYVEQLERD
AGRLLDCRARVNFCPLGACALAGTGLPIDRFMTSDALGFTAPMRNSIDAVSDRDFVLELL
SANSITAVHLSRLGEEWVLWASEEFGFLTPSDKVSTGSSIMPQKKNPDPMELVRGKSARV
IGDLVSLLVLCKGLPHAYNRDLQEDKEPVFDSVKAIVGMLEVSAEFAQNVSFNRERIQKA
LPAGHLDATTLADYLVKKGIPFRTSHDIVGRSVALCVSRNCELQDLSLDELNSLNPIFDK
DVYEYLGVENSIKKFRSYGSTGSECVAGQLDYWMDKLSISRER*

Transcript Sequence

Transcript ID

PGSC0003DMT400024171
Transcript Infomation

pacid=37475667 locus=PGSC0003DMG400009343 ID=PGSC0003DMT400024171.v4.03 annot-version=v4.03
Sequence

ATGGAGTCACTGTTAATTTCTTCCTCTTCTTCTTTGACAACATCCCCCATTTTCTCTTCA
TCCAAACACGCCCTTACTCCTAAACCCCAAAACCTCACCTTCAACTCCAATGCTCGCTTA
GTATTGCTCACCTGTGCAGCGCAGCAGATGAATTCACCACCCTCTACGGCGGCGAAGGAA
AAGGAGGTGAAGCTATGGGGTGGCCGTTTCGAAGAGAGCGTCACCGATGCTGTGGAGAAG
TTCACTGAGTCCATTTCGTTTGATAAAGCTCTCTATAAACAGGATATCATGGGTAGTAAA
GCTCATGCCTCAATGCTCGCTAAACAGGGATTGATGAGTGATAGTGATAGAGATACTATC
ATAAAAGGTCTTGACGAGATACAGAGGCAAATTGAGGCAGGTGAATTTGTATGGAGGACA
GATAGAGAGGATGTGCATATGAACATTGAAGCAGCGCTTACTGATTTGGTTGGTGAACCT
GCCAAAAAGCTTCACACTGCGCGGAGTAGAAATGATCAAGTTGCAACTGACTTTCGCTTG
TGGTGTCGTGATGCTATTGACGGAATCATTTCACGCATTAAGAATCTTCAGATTGCAATG
GTTGAACTAGCTCTCCAAAATGAGGGTCTTATTGTTCCTGGATACACTCATCTGCAAAGG
GCCCAACCTGTTCTGTTGCAACACCTTCTCTTAGCATATGTTGAACAGCTTGAGCGTGAT
GCTGGTCGCTTATTAGATTGTAGAGCAAGGGTGAATTTCTGCCCTCTAGGTGCATGTGCA
TTAGCTGGCACTGGTCTTCCCATTGATAGGTTTATGACTTCTGATGCATTGGGATTCACT
GCCCCCATGAGGAACAGCATTGATGCAGTTTCAGATCGAGATTTTGTGCTGGAGTTACTT
TCTGCTAATTCCATCACTGCTGTTCATCTCTCTCGCCTGGGTGAAGAATGGGTATTGTGG
GCATCTGAAGAATTTGGCTTCTTGACCCCTAGTGATAAAGTTTCCACTGGAAGCAGTATA
ATGCCCCAAAAGAAGAATCCAGATCCAATGGAGCTTGTTCGTGGAAAATCTGCTAGAGTC
ATAGGGGACTTAGTTTCACTTCTTGTGTTGTGCAAGGGACTTCCCCATGCTTACAACCGA
GATTTGCAGGAAGATAAGGAGCCTGTATTTGACAGTGTCAAGGCAATAGTTGGGATGCTC
GAAGTCTCAGCAGAGTTTGCGCAGAATGTTTCCTTTAACCGAGAAAGGATACAAAAGGCT
CTACCAGCTGGTCATCTTGATGCCACTACACTCGCTGATTACCTTGTGAAAAAGGGAATA
CCTTTCAGAACTTCTCATGACATAGTTGGGAGGTCTGTCGCTTTGTGTGTTTCCAGAAAC
TGCGAGCTTCAAGACCTTAGCCTTGACGAGTTGAACAGTCTAAATCCGATATTTGACAAG
GATGTCTACGAATATCTAGGGGTTGAAAATTCAATTAAAAAATTCAGGTCATATGGCTCC
ACAGGTTCAGAATGTGTTGCTGGTCAGCTTGATTACTGGATGGATAAGCTAAGTATCAGC
AGAGAGAGGTAA