Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400024123
CDS Infomation

pacid=37470464 polypeptide=PGSC0003DMP400016465 locus=PGSC0003DMG400009324 ID=PGSC0003DMT400024123.v4.03 annot-version=v4.03
Sequence

ATGGCGGAAGCTTTTCTTCAAGTTCTGCTAGAAAATCTCAATTCTTTCATAAGAGGGAAA
CTTGTATTGCTTTTCGGTTTCGAAAAGGAATTTGAAAAGCTGTCCAGTGTGTTTTCCACA
ATTCAAGCTGTACTTCAAGATGCTCAAGAGAAGCAATTGAAGGACAAGGCAATTGAGAAT
TGGTTGCAGAAACTAAATTCTGCTGCGTATGAAGTTGATGACATATTGGGCGAATGTAAA
AATGAGGCAATAAGATTCGAGCAGTCTCTATTAGGGTTTTATCATCCAGGGATTATCAGT
TTCCGTCACAAAATTGGGAAAAGGATGAAAGAGATAATGGAGAAACTAGATGCAATTGCT
GAGGAAAGAAGGAAGTTTCATTTCCTTGAAAAAATTACAGAGAGACAAGCTGCCGCTGCT
ACGCGTGAAACAGGTTTTGTGTTAACTGAACCAAAAGTCTACGGAAGGGACAAAGAGGAG
GATGAGATAGTGAAAATCTTGATAAACAATGTTAATGTTGCCGAAGAACTTCCAGTCTTC
CCTATAATTGGTATGGGGGGACTAGGAAAGACGACACTTGCCCAAATGATCTTCAATGAT
GAGAGAGTGACTAAGCATTTCAATCCCAAAATATGGGTTTGTGTCTCAGATGATTTTGAT
GAGAAGAGGTTAATTAAGACAATTATAGGAAATATTGAAAGAAGTTCTCCTCGTGTCGAG
GACTTGGCTTCATTTCAGAAGAAGCTCCAAGAGTTATTGAATGGAAAACGATACTTGCTT
GTCTTAGATGATGTTTGGAATGATGATCTAGAAAAGTGGGCCAAGTTAAGAGCAGTCTTA
AATGTTGGAGCAAGAGGTGCTTCTATTCTAGCTACTACTCGTCTTGAAAAGGTTGGATCA
ATTATGGGAACGTCGCAGCCATATCATTTGTCAAATTTGTCTCCACATGATAGTTTACTG
TTATTTATGCAACGCGCATTTGGGCAACAAAGAGAAGCAAATCCTAATCTAGTGGCCATT
GGAAAGGAGATTGTGAAGAAATGCGGTGGTGTGCCTTTAGCGGCCAAGACTCTTGGTGGT
CTTTTACGCTTCAAGAGAGAAGAGAGTGAATGGGAACATGTGAGAGATAATGAGATTTGG
AGTCTGCCTCAAGATGAAAGTTCTATTTTGCCTGCTCTAAGACTGAGTTATCATCACCTT
CCAGTTGATTTGAGACAATGCTTTGCGTATTGTGCAGTATTCCCAAAGGACACCAAAATG
ATAAAGGAAAATCTCATCACTCTCTGGATGGCCCATGGTTTTCTTTTATCAAAGGGAAAC
TTGGAGCTAGAGTATGTGGGTAATGAAGTATGGAATGAATTATACTTGAGGTCTTTCTTC
CAAGAGATTGAAGTTAAATCCGGTAATACTTATTTCAAGATACATGATCTCATCCATGAT
TTGGCTACATCTCTGTATTTGGCAAGCACATCAAGCAGCAATATCCGCGAAATAAATGTC
AAAGATTATAAGCATATAATGTCCATTGGTTTCGCTGAAGTGGTGTCTTCTTACTCTCCT
TCGCTCTTGAAAAAGTTTGTCTCGTTAAGGGTGCTTAATCTAAGTTACTCAAAACTTGAG
CAATTACCCTCTTCCATTGGAGATCTATTACATTTAAGATACCTGGACCTGTCTCGCAAT
AACTTCCGTAGTCTTCCAGAGAGGTTATGCAAGCTTCAAAATCTTCAGACTCTTGATGTG
CATAATTGCTACTCACTTAATTGTTTGCCAAAACAAACAAGTAAACTTAGTAGTCTGCGA
AATCTTGTTCTTGATGGCTGTCCATTGACTTCTACTCCACCAAGGATAGGGTTGTTGACA
TGCCTTAAGACTCTAGGTTTCTTTATTGTGGGAAGCAAGAAAGGTTATCAACTTGGTGAA
CTGAAAAACCTAAATCTCTGCGGCTCAATTTCAATCACACACCTTGAGAGAGTGAAGAAC
GATACGGATGCAGAAGCCAATTTATCTGCAAAAGCAAATCTGCAATCTTTAAGCATGAGT
TGGGATAACGATGGACCAAACAGATATGAATCCGAAGAAGTTAAAGTGCTTGAAGCCCTC
AAACCACACCCCAATCTGAAATATTTAGAGATCATTGCCTTCGGAGGATTCCGTTTTCCA
AGCTGGATAAATCACTCAGTTTTGGAGAAGGTCATCTCTATTAGAATTAAAAGTTGCAAA
AACTGCTTGTGCTTACCACCCTTTGGGGAGCTGCCTTGTCTAGAAAGTCTAGAGTTACAA
AACGGGTCTGCGGAGGTGGAGTATGTTGAAGAGGATGATGTCCATTCTAGATTCTCCACA
AGAAGAAGGTTTCCATCCCTGAAAAAACTTCGTATATGGTTCTTTCGTAATTTGAAAGGG
TTGGTGAAACAGGAAGGAGAAAACAAATTCCCCATGCTCGAAGAGATGGCGATTTTACAT
TGCCCTCTGTTTGTTTTTCCAATCCTTTCTTCTGTCAAGAAATTAGAAGTTCACGGCAAC
ACAAAAGCAAGAGGTTTGAGCTCCATATCTAATCTTAGCACTCTTACTTCCCTCCGCATT
GGTGCTAACTACAGAGCGACTTCACTCCCAGAAGAGATGTTCACAAGTCTTACAAATCTC
GAATACTTGAGTTTCTTTGACTTCAAGAATCTCAAAGAGCTGCCTACCAGCCTGACTAGT
CTCAATGCTTTGAAGCGTCTCCAAATTGAAAGTTGTGACTCACTAGAGAGTCTCCCTGAA
CAAGGGCTGGAAGGTTTAACTTCACTCACACAGTTATTCGTTAAATACTGTAAGATGCTA
GAATGTTTACCCGAGGGATTGCAGCACCTAACAGCCCTCACAAATTTTGGAGTAACCGGT
TGTCCAGAAGTGGAAAAGCGCTGTGATAAGGAAATAGGAGAAGACTGGCACAAAATTGCT
CACATTCCTAATTTGAGTATATATTAG

Peptide Sequence

PEP ID

PGSC0003DMP400016465
PEP Infomation

pacid=37470464 transcript=PGSC0003DMT400024123 locus=PGSC0003DMG400009324 ID=PGSC0003DMT400024123.v4.03 annot-version=v4.03
Sequence

MAEAFLQVLLENLNSFIRGKLVLLFGFEKEFEKLSSVFSTIQAVLQDAQEKQLKDKAIEN
WLQKLNSAAYEVDDILGECKNEAIRFEQSLLGFYHPGIISFRHKIGKRMKEIMEKLDAIA
EERRKFHFLEKITERQAAAATRETGFVLTEPKVYGRDKEEDEIVKILINNVNVAEELPVF
PIIGMGGLGKTTLAQMIFNDERVTKHFNPKIWVCVSDDFDEKRLIKTIIGNIERSSPRVE
DLASFQKKLQELLNGKRYLLVLDDVWNDDLEKWAKLRAVLNVGARGASILATTRLEKVGS
IMGTSQPYHLSNLSPHDSLLLFMQRAFGQQREANPNLVAIGKEIVKKCGGVPLAAKTLGG
LLRFKREESEWEHVRDNEIWSLPQDESSILPALRLSYHHLPVDLRQCFAYCAVFPKDTKM
IKENLITLWMAHGFLLSKGNLELEYVGNEVWNELYLRSFFQEIEVKSGNTYFKIHDLIHD
LATSLYLASTSSSNIREINVKDYKHIMSIGFAEVVSSYSPSLLKKFVSLRVLNLSYSKLE
QLPSSIGDLLHLRYLDLSRNNFRSLPERLCKLQNLQTLDVHNCYSLNCLPKQTSKLSSLR
NLVLDGCPLTSTPPRIGLLTCLKTLGFFIVGSKKGYQLGELKNLNLCGSISITHLERVKN
DTDAEANLSAKANLQSLSMSWDNDGPNRYESEEVKVLEALKPHPNLKYLEIIAFGGFRFP
SWINHSVLEKVISIRIKSCKNCLCLPPFGELPCLESLELQNGSAEVEYVEEDDVHSRFST
RRRFPSLKKLRIWFFRNLKGLVKQEGENKFPMLEEMAILHCPLFVFPILSSVKKLEVHGN
TKARGLSSISNLSTLTSLRIGANYRATSLPEEMFTSLTNLEYLSFFDFKNLKELPTSLTS
LNALKRLQIESCDSLESLPEQGLEGLTSLTQLFVKYCKMLECLPEGLQHLTALTNFGVTG
CPEVEKRCDKEIGEDWHKIAHIPNLSIY*

Transcript Sequence

Transcript ID

PGSC0003DMT400024123
Transcript Infomation

pacid=37470464 locus=PGSC0003DMG400009324 ID=PGSC0003DMT400024123.v4.03 annot-version=v4.03
Sequence

ATGGCGGAAGCTTTTCTTCAAGTTCTGCTAGAAAATCTCAATTCTTTCATAAGAGGGAAA
CTTGTATTGCTTTTCGGTTTCGAAAAGGAATTTGAAAAGCTGTCCAGTGTGTTTTCCACA
ATTCAAGCTGTACTTCAAGATGCTCAAGAGAAGCAATTGAAGGACAAGGCAATTGAGAAT
TGGTTGCAGAAACTAAATTCTGCTGCGTATGAAGTTGATGACATATTGGGCGAATGTAAA
AATGAGGCAATAAGATTCGAGCAGTCTCTATTAGGGTTTTATCATCCAGGGATTATCAGT
TTCCGTCACAAAATTGGGAAAAGGATGAAAGAGATAATGGAGAAACTAGATGCAATTGCT
GAGGAAAGAAGGAAGTTTCATTTCCTTGAAAAAATTACAGAGAGACAAGCTGCCGCTGCT
ACGCGTGAAACAGGTTTTGTGTTAACTGAACCAAAAGTCTACGGAAGGGACAAAGAGGAG
GATGAGATAGTGAAAATCTTGATAAACAATGTTAATGTTGCCGAAGAACTTCCAGTCTTC
CCTATAATTGGTATGGGGGGACTAGGAAAGACGACACTTGCCCAAATGATCTTCAATGAT
GAGAGAGTGACTAAGCATTTCAATCCCAAAATATGGGTTTGTGTCTCAGATGATTTTGAT
GAGAAGAGGTTAATTAAGACAATTATAGGAAATATTGAAAGAAGTTCTCCTCGTGTCGAG
GACTTGGCTTCATTTCAGAAGAAGCTCCAAGAGTTATTGAATGGAAAACGATACTTGCTT
GTCTTAGATGATGTTTGGAATGATGATCTAGAAAAGTGGGCCAAGTTAAGAGCAGTCTTA
AATGTTGGAGCAAGAGGTGCTTCTATTCTAGCTACTACTCGTCTTGAAAAGGTTGGATCA
ATTATGGGAACGTCGCAGCCATATCATTTGTCAAATTTGTCTCCACATGATAGTTTACTG
TTATTTATGCAACGCGCATTTGGGCAACAAAGAGAAGCAAATCCTAATCTAGTGGCCATT
GGAAAGGAGATTGTGAAGAAATGCGGTGGTGTGCCTTTAGCGGCCAAGACTCTTGGTGGT
CTTTTACGCTTCAAGAGAGAAGAGAGTGAATGGGAACATGTGAGAGATAATGAGATTTGG
AGTCTGCCTCAAGATGAAAGTTCTATTTTGCCTGCTCTAAGACTGAGTTATCATCACCTT
CCAGTTGATTTGAGACAATGCTTTGCGTATTGTGCAGTATTCCCAAAGGACACCAAAATG
ATAAAGGAAAATCTCATCACTCTCTGGATGGCCCATGGTTTTCTTTTATCAAAGGGAAAC
TTGGAGCTAGAGTATGTGGGTAATGAAGTATGGAATGAATTATACTTGAGGTCTTTCTTC
CAAGAGATTGAAGTTAAATCCGGTAATACTTATTTCAAGATACATGATCTCATCCATGAT
TTGGCTACATCTCTGTATTTGGCAAGCACATCAAGCAGCAATATCCGCGAAATAAATGTC
AAAGATTATAAGCATATAATGTCCATTGGTTTCGCTGAAGTGGTGTCTTCTTACTCTCCT
TCGCTCTTGAAAAAGTTTGTCTCGTTAAGGGTGCTTAATCTAAGTTACTCAAAACTTGAG
CAATTACCCTCTTCCATTGGAGATCTATTACATTTAAGATACCTGGACCTGTCTCGCAAT
AACTTCCGTAGTCTTCCAGAGAGGTTATGCAAGCTTCAAAATCTTCAGACTCTTGATGTG
CATAATTGCTACTCACTTAATTGTTTGCCAAAACAAACAAGTAAACTTAGTAGTCTGCGA
AATCTTGTTCTTGATGGCTGTCCATTGACTTCTACTCCACCAAGGATAGGGTTGTTGACA
TGCCTTAAGACTCTAGGTTTCTTTATTGTGGGAAGCAAGAAAGGTTATCAACTTGGTGAA
CTGAAAAACCTAAATCTCTGCGGCTCAATTTCAATCACACACCTTGAGAGAGTGAAGAAC
GATACGGATGCAGAAGCCAATTTATCTGCAAAAGCAAATCTGCAATCTTTAAGCATGAGT
TGGGATAACGATGGACCAAACAGATATGAATCCGAAGAAGTTAAAGTGCTTGAAGCCCTC
AAACCACACCCCAATCTGAAATATTTAGAGATCATTGCCTTCGGAGGATTCCGTTTTCCA
AGCTGGATAAATCACTCAGTTTTGGAGAAGGTCATCTCTATTAGAATTAAAAGTTGCAAA
AACTGCTTGTGCTTACCACCCTTTGGGGAGCTGCCTTGTCTAGAAAGTCTAGAGTTACAA
AACGGGTCTGCGGAGGTGGAGTATGTTGAAGAGGATGATGTCCATTCTAGATTCTCCACA
AGAAGAAGGTTTCCATCCCTGAAAAAACTTCGTATATGGTTCTTTCGTAATTTGAAAGGG
TTGGTGAAACAGGAAGGAGAAAACAAATTCCCCATGCTCGAAGAGATGGCGATTTTACAT
TGCCCTCTGTTTGTTTTTCCAATCCTTTCTTCTGTCAAGAAATTAGAAGTTCACGGCAAC
ACAAAAGCAAGAGGTTTGAGCTCCATATCTAATCTTAGCACTCTTACTTCCCTCCGCATT
GGTGCTAACTACAGAGCGACTTCACTCCCAGAAGAGATGTTCACAAGTCTTACAAATCTC
GAATACTTGAGTTTCTTTGACTTCAAGAATCTCAAAGAGCTGCCTACCAGCCTGACTAGT
CTCAATGCTTTGAAGCGTCTCCAAATTGAAAGTTGTGACTCACTAGAGAGTCTCCCTGAA
CAAGGGCTGGAAGGTTTAACTTCACTCACACAGTTATTCGTTAAATACTGTAAGATGCTA
GAATGTTTACCCGAGGGATTGCAGCACCTAACAGCCCTCACAAATTTTGGAGTAACCGGT
TGTCCAGAAGTGGAAAAGCGCTGTGATAAGGAAATAGGAGAAGACTGGCACAAAATTGCT
CACATTCCTAATTTGAGTATATATTAG