Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400024099
CDS Infomation

pacid=37471007 polypeptide=PGSC0003DMP400016444 locus=PGSC0003DMG400009320 ID=PGSC0003DMT400024099.v4.03 annot-version=v4.03
Sequence

ATGGAGAAAAAAGAGGGAGAGCACTGGAGGGAGATGGTGAAAAGAATGCTTCCTCAGGGA
GGGGATGGGGAAAATATTGAATATTCAATAGCAATGGAGTATACTGGTCCTTTGTTGTCA
TATGAGGTTCCTAAAGTAGAGCCTCTTGATGTGAATTCTAGTGCAATTCCAATAGCAGAA
CCTCTTTCAGAATCAAGAAGATCATTGAGTAATGGTGTTGCCCCGGTTATCGAACCTATT
CTGTTGCCGGTATCTCGTATTGCTGGTGTAACAAGTCCCCCTAGTCATAGTCCAAGGGTA
TCTTATAGTTCTGAGTCTCAAGTGTCTGTCTTGCAGAACCCTGATTCTTCTTCAGGTTCT
CCGTCAGCATCACCGGGTTCAGTGCTGAATCACCAGGGGAGAAGAGCCCCAGTAGTCACC
TTTGTTGATAGATCTGAAAGAGTAACGGGGGAAATTGAGAATCAAGTCTTTCCTGAATAT
GTTGGAGTTTCTAAGGAAAGGAAGAAGAATAAGAAGTCAAGAGTCTGTCATAGGTGTGGA
AAAGGGAAGTGGGAAAGTAAAGAGTCTTGCTTGGTTTGTGATGCAAAGTATTGTAGCAAT
TGTGTGCTTAGAGCAATGGGTTCAATGCCTGAAGGGCGCAAATGTGTGAGTTGCATTAAC
CAGCCAATTGATGAGTCAAAAAGGTCCAAACTTGGTAAAAATTCAAGAGTCTTATCGCGT
TTGCTTAGTCCTTTGGAAGTCAAGCAGATAATGAAAGCAGAAAGAGAATGTGCTGCTAAT
CAGCTCCGCCCAGAGCAGCTGATTGTGAACGGATTTCCTTTGAAGCCAGATGAGATGGCA
GAACTCTTTGGGTGCCTTTTACCTCCTAGGAAGTTGAAGCCTGGGAGGTATTGGTATGAT
AAGGAATCTGGATTATGGGGAAAGGAAGGAGAAAAACCAGACAGAGTTGTCAGTTCAAAC
CTAAATTTTACGGGAAAACTTAATGCTCATGCTAGCAATGGAAGTACTCAGGTTTACATT
AATGGCCGAGAGATAACAAGACGTGAACTTCGAGTGCTGAAGTTTGCAAAAGTGCAGTGC
CCTCGTGACACTCACTTTTGGGTATATGATGATGGTCGTTACGAGGAAGAAGGACAAAAC
AACATTCGGGGTAACATATGGGAAAAGGCAACAACACGGTTTGTTTGCTCTCTATTTTCC
TTGCCTGTACCACATGGTCAACCCTATGGACAGAGAGATGAGCCTAGCAATTATACTACT
GTTCCAAATTACTTAGAGCAGAAAAGGGTTCAAAAGCTACTTTTACTTGGTCTTGAAGGT
TCTGGAACTAGCACTATTTTCAAACAGGCGAAATTTTTGTATGGAAACACGTTTACCTCT
GAAGAAATTCAAGACATCAAGTTGATGATTCAAAGCAATATTTACAAGTATCTGAGCATT
CTCCTTGATGGAAGGGAGCGCTTTGAGGAGGAGGCTTTAGCAAAAATAAATGCGGAAGGT
TGTAACACAGAATCTGTGGAAGACAGCCAGTGTGTCTATTCCTTAAATCAAAGGTTGAAG
CATTTCTCTGATTGGCTACTGGATATTATAGCCACCGGAGATTTGGATGCTTTCTTCCCT
GCAGCAACGCGTGAATATGCTCCGTTGGTTGAAGAGGTTTGGAAGGATCCTGCTATACAG
GAAACATACAAGAGAAGAAATGAGCTTCATTTTCTTCCAGATGTGGCGGATTACTTCTTG
AGCAAGGCTGTGGAGGTATCAAGCAATGAGTACGAACCTTCGGAGCAAGACATTCTGTAT
GCAGAAGGAGTCACGCAAGGGAATGGGTTGGCCTTTATGGAGTTCCAATTGGATGATCGT
AGCCCAATGTCTGAAACCTATGGAGACAATCTGGAAGCTCCTCCCCCTCTCACCAGGTAT
CAGCTAATTCGACTAAATGCCAAAGGAATGAATGAAGGATGCAAGTGGATGGAGATGTTT
GAAGATGTCCGTGTCGTAGTATTTTGTGTTTCCCTTAGTGATTATGATCAGATGTGGGTT
GCTCCAGAGGAAAATGGTAGTGGTGCACTACTTCAGAACAAGATGATGCATAACAGGGAG
CTTTTCGAAACAATGATCAGGCATCCTTGTTTCAAAGAGACCCCATTTGTTTTAGTATTG
AACAAGTATGACCTGTTCGAGGAAAAGGTCAACCGTGTGCCATTGGGCGCTTGTGAATGG
TTCACTGATTTCAGTCCACTGAGACCTCACACCAATAGCCAGTCACTAGCTCACCAAGCA
TATTACTATGTTGCAATGAAGTTCAAAGGCCTCTATGCTTCCCTCACAAGTAGAAAGCTA
TTTGTGTGGCAAGCTCGGGCTAGGGAACGAATAACTGTTGATGAGGCATTCAAGTATATA
AGGGAGGTCGCGAAGTGGGACGAGGAAAAAGAAGAAACCTACAATGTTGGAGCAGAAGAT
TCATTTTACAGTACAACCGATATTAGCTCGTCTCCTTTCATCCGACAGGAGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400016444
PEP Infomation

pacid=37471007 transcript=PGSC0003DMT400024099 locus=PGSC0003DMG400009320 ID=PGSC0003DMT400024099.v4.03 annot-version=v4.03
Sequence

MEKKEGEHWREMVKRMLPQGGDGENIEYSIAMEYTGPLLSYEVPKVEPLDVNSSAIPIAE
PLSESRRSLSNGVAPVIEPILLPVSRIAGVTSPPSHSPRVSYSSESQVSVLQNPDSSSGS
PSASPGSVLNHQGRRAPVVTFVDRSERVTGEIENQVFPEYVGVSKERKKNKKSRVCHRCG
KGKWESKESCLVCDAKYCSNCVLRAMGSMPEGRKCVSCINQPIDESKRSKLGKNSRVLSR
LLSPLEVKQIMKAERECAANQLRPEQLIVNGFPLKPDEMAELFGCLLPPRKLKPGRYWYD
KESGLWGKEGEKPDRVVSSNLNFTGKLNAHASNGSTQVYINGREITRRELRVLKFAKVQC
PRDTHFWVYDDGRYEEEGQNNIRGNIWEKATTRFVCSLFSLPVPHGQPYGQRDEPSNYTT
VPNYLEQKRVQKLLLLGLEGSGTSTIFKQAKFLYGNTFTSEEIQDIKLMIQSNIYKYLSI
LLDGRERFEEEALAKINAEGCNTESVEDSQCVYSLNQRLKHFSDWLLDIIATGDLDAFFP
AATREYAPLVEEVWKDPAIQETYKRRNELHFLPDVADYFLSKAVEVSSNEYEPSEQDILY
AEGVTQGNGLAFMEFQLDDRSPMSETYGDNLEAPPPLTRYQLIRLNAKGMNEGCKWMEMF
EDVRVVVFCVSLSDYDQMWVAPEENGSGALLQNKMMHNRELFETMIRHPCFKETPFVLVL
NKYDLFEEKVNRVPLGACEWFTDFSPLRPHTNSQSLAHQAYYYVAMKFKGLYASLTSRKL
FVWQARARERITVDEAFKYIREVAKWDEEKEETYNVGAEDSFYSTTDISSSPFIRQE*

Transcript Sequence

Transcript ID

PGSC0003DMT400024099
Transcript Infomation

pacid=37471007 locus=PGSC0003DMG400009320 ID=PGSC0003DMT400024099.v4.03 annot-version=v4.03
Sequence

ATGGAGAAAAAAGAGGGAGAGCACTGGAGGGAGATGGTGAAAAGAATGCTTCCTCAGGGA
GGGGATGGGGAAAATATTGAATATTCAATAGCAATGGAGTATACTGGTCCTTTGTTGTCA
TATGAGGTTCCTAAAGTAGAGCCTCTTGATGTGAATTCTAGTGCAATTCCAATAGCAGAA
CCTCTTTCAGAATCAAGAAGATCATTGAGTAATGGTGTTGCCCCGGTTATCGAACCTATT
CTGTTGCCGGTATCTCGTATTGCTGGTGTAACAAGTCCCCCTAGTCATAGTCCAAGGGTA
TCTTATAGTTCTGAGTCTCAAGTGTCTGTCTTGCAGAACCCTGATTCTTCTTCAGGTTCT
CCGTCAGCATCACCGGGTTCAGTGCTGAATCACCAGGGGAGAAGAGCCCCAGTAGTCACC
TTTGTTGATAGATCTGAAAGAGTAACGGGGGAAATTGAGAATCAAGTCTTTCCTGAATAT
GTTGGAGTTTCTAAGGAAAGGAAGAAGAATAAGAAGTCAAGAGTCTGTCATAGGTGTGGA
AAAGGGAAGTGGGAAAGTAAAGAGTCTTGCTTGGTTTGTGATGCAAAGTATTGTAGCAAT
TGTGTGCTTAGAGCAATGGGTTCAATGCCTGAAGGGCGCAAATGTGTGAGTTGCATTAAC
CAGCCAATTGATGAGTCAAAAAGGTCCAAACTTGGTAAAAATTCAAGAGTCTTATCGCGT
TTGCTTAGTCCTTTGGAAGTCAAGCAGATAATGAAAGCAGAAAGAGAATGTGCTGCTAAT
CAGCTCCGCCCAGAGCAGCTGATTGTGAACGGATTTCCTTTGAAGCCAGATGAGATGGCA
GAACTCTTTGGGTGCCTTTTACCTCCTAGGAAGTTGAAGCCTGGGAGGTATTGGTATGAT
AAGGAATCTGGATTATGGGGAAAGGAAGGAGAAAAACCAGACAGAGTTGTCAGTTCAAAC
CTAAATTTTACGGGAAAACTTAATGCTCATGCTAGCAATGGAAGTACTCAGGTTTACATT
AATGGCCGAGAGATAACAAGACGTGAACTTCGAGTGCTGAAGTTTGCAAAAGTGCAGTGC
CCTCGTGACACTCACTTTTGGGTATATGATGATGGTCGTTACGAGGAAGAAGGACAAAAC
AACATTCGGGGTAACATATGGGAAAAGGCAACAACACGGTTTGTTTGCTCTCTATTTTCC
TTGCCTGTACCACATGGTCAACCCTATGGACAGAGAGATGAGCCTAGCAATTATACTACT
GTTCCAAATTACTTAGAGCAGAAAAGGGTTCAAAAGCTACTTTTACTTGGTCTTGAAGGT
TCTGGAACTAGCACTATTTTCAAACAGGCGAAATTTTTGTATGGAAACACGTTTACCTCT
GAAGAAATTCAAGACATCAAGTTGATGATTCAAAGCAATATTTACAAGTATCTGAGCATT
CTCCTTGATGGAAGGGAGCGCTTTGAGGAGGAGGCTTTAGCAAAAATAAATGCGGAAGGT
TGTAACACAGAATCTGTGGAAGACAGCCAGTGTGTCTATTCCTTAAATCAAAGGTTGAAG
CATTTCTCTGATTGGCTACTGGATATTATAGCCACCGGAGATTTGGATGCTTTCTTCCCT
GCAGCAACGCGTGAATATGCTCCGTTGGTTGAAGAGGTTTGGAAGGATCCTGCTATACAG
GAAACATACAAGAGAAGAAATGAGCTTCATTTTCTTCCAGATGTGGCGGATTACTTCTTG
AGCAAGGCTGTGGAGGTATCAAGCAATGAGTACGAACCTTCGGAGCAAGACATTCTGTAT
GCAGAAGGAGTCACGCAAGGGAATGGGTTGGCCTTTATGGAGTTCCAATTGGATGATCGT
AGCCCAATGTCTGAAACCTATGGAGACAATCTGGAAGCTCCTCCCCCTCTCACCAGGTAT
CAGCTAATTCGACTAAATGCCAAAGGAATGAATGAAGGATGCAAGTGGATGGAGATGTTT
GAAGATGTCCGTGTCGTAGTATTTTGTGTTTCCCTTAGTGATTATGATCAGATGTGGGTT
GCTCCAGAGGAAAATGGTAGTGGTGCACTACTTCAGAACAAGATGATGCATAACAGGGAG
CTTTTCGAAACAATGATCAGGCATCCTTGTTTCAAAGAGACCCCATTTGTTTTAGTATTG
AACAAGTATGACCTGTTCGAGGAAAAGGTCAACCGTGTGCCATTGGGCGCTTGTGAATGG
TTCACTGATTTCAGTCCACTGAGACCTCACACCAATAGCCAGTCACTAGCTCACCAAGCA
TATTACTATGTTGCAATGAAGTTCAAAGGCCTCTATGCTTCCCTCACAAGTAGAAAGCTA
TTTGTGTGGCAAGCTCGGGCTAGGGAACGAATAACTGTTGATGAGGCATTCAAGTATATA
AGGGAGGTCGCGAAGTGGGACGAGGAAAAAGAAGAAACCTACAATGTTGGAGCAGAAGAT
TCATTTTACAGTACAACCGATATTAGCTCGTCTCCTTTCATCCGACAGGAGTGA