Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400024026
CDS Infomation

pacid=37470694 polypeptide=PGSC0003DMP400016392 locus=PGSC0003DMG400009295 ID=PGSC0003DMT400024026.v4.03 annot-version=v4.03
Sequence

ATGGTAGCAAAGCAGTTAGATGACGAACCTCAAACCCTCACAAATTCAGCAAACTATGAA
TCCAAATCTCACAAGAAACAGAAGAGAAAGCTCGAAGACCCTGAGGTTGAAGAAGTTGTT
GTAGAATCCAAAAAAGAGAAAAAGAAGAAGAAGAAGCAGAAACAGAAGCAAGAAGAAGAA
GGATCTAATGGGAACACTGAAACTCTTGATGGGTCGAATGGAAATACTGAAATATTTGAT
GGGTCAGCTGAGTTATCTGAAAAGAAGAAGTCGAAGAAGGAGAAGAAGAGTAAGGTAAAT
GAAGGGAATTTGGATGATGGGTCTGATGTTAGTGTTGTTAATGGGGAGGTTAAAGAAAGT
AGTACAAATGTGGTGGTTACTGGTAAGGGTGCTAATGAGTCAAAGTACAAAGCTTTAGAA
AAGTTTGTGGATGCAGGGCTTCCAAGTGAGGTGTTGGAATGTTGTAAGAATTTTGAGAAA
CCATCACCAATTCAATCTCATTCCTGGCCTTTTCTTTTAGATGGACGTGATTTCATTGGG
ATAGCTAGAACTGGATCAGGTAAGACGTTGGCTTTTGGTATTCCGGCTATAATGCACATC
ACGAGTAAGCGGAAGAGTAAAAAGTCTAAGAATCCTGTTTGCCTTGTACTTTCGCCTACA
AGGGAGTTAGCTCAACAAATATCAGATGTTCTTTGTGAGGCTGGGAAGCCTACTGGTGTG
CAGTCAGTTTGTCTATATGGCGGAGTTGATAAGCACCATCAAAAGGCTTCTCTTAGATCT
GGCGTGGATATTGTTATTGGAACCCCTGGTCGTTTGCAAGATCTGATGGAAATGGGAGCT
TGCAATTTAAAAGAGGTTTCTTTTGTGGTGCTAGATGAAGCTGATCGCATGCTTGATTTA
GGTTTTGAACCAGCGGTCCGTGCCATATTGAGCCAAACATGCTCTGTTCGGCAGATGGTT
ATGTTCAGTGCTACATGGCCTCTGGAAGTTCATCAATTAGCTCAAGAGTTCATGGATCCC
AATCCAATCAAGGTAGTTGTAGGTTCAGAAGATTTGGCTGCCAACCACGATGTCATGCAA
ATTGTTGAGGTCTTGGAAGATCGAGCACGGGATGAGCGTTTACAATGTTTGCTGGAAAAA
TACCACAAGTCTAGAAGGAATAGAGTATTGGTTTTTGTTTTATACAAGAAGGAAGCATCT
CGTGTTGAAATGATGCTACAGAAAAGGGGTTGGAAAGTTGTCTCCATTAGTGGTGACAAG
CAACAACATGCTCGTACTAAGGCCCTGTCACTCTTCAAGGATGGAAGCTGTCCTCTACTG
ATAGCTACTGATGTAGCTGCTCGAGGGCTTGATATACCTGATGTTGAAGTTGTGATAAAT
TATAGTTTCCCTTTGACAACAGAGGATTATGTTCATAGAATTGGAAGAACTGGAAGGGCT
GGTAAAAAAGGTGTAGCTCATACATTTTTCACCAAGGATAACAAGGGACTTTCTGGGGAG
TTGATAAATGTCCTCAGAGAAGCTGGACAGACTGTTCCAGCTGCCCTTCTTAACTTTGGA
ACCCATGTAAAGAAAAAGGAGTCCAAGCTCTATGGTGCTCATTTTAGAGAAATTGATGCA
AATGCTCCAAAGGCCACCAAAATAAAATTTGGCGATTCTGATAATGAAGATTGA

Peptide Sequence

PEP ID

PGSC0003DMP400016392
PEP Infomation

pacid=37470694 transcript=PGSC0003DMT400024026 locus=PGSC0003DMG400009295 ID=PGSC0003DMT400024026.v4.03 annot-version=v4.03
Sequence

MVAKQLDDEPQTLTNSANYESKSHKKQKRKLEDPEVEEVVVESKKEKKKKKKQKQKQEEE
GSNGNTETLDGSNGNTEIFDGSAELSEKKKSKKEKKSKVNEGNLDDGSDVSVVNGEVKES
STNVVVTGKGANESKYKALEKFVDAGLPSEVLECCKNFEKPSPIQSHSWPFLLDGRDFIG
IARTGSGKTLAFGIPAIMHITSKRKSKKSKNPVCLVLSPTRELAQQISDVLCEAGKPTGV
QSVCLYGGVDKHHQKASLRSGVDIVIGTPGRLQDLMEMGACNLKEVSFVVLDEADRMLDL
GFEPAVRAILSQTCSVRQMVMFSATWPLEVHQLAQEFMDPNPIKVVVGSEDLAANHDVMQ
IVEVLEDRARDERLQCLLEKYHKSRRNRVLVFVLYKKEASRVEMMLQKRGWKVVSISGDK
QQHARTKALSLFKDGSCPLLIATDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGRA
GKKGVAHTFFTKDNKGLSGELINVLREAGQTVPAALLNFGTHVKKKESKLYGAHFREIDA
NAPKATKIKFGDSDNED*

Transcript Sequence

Transcript ID

PGSC0003DMT400024026
Transcript Infomation

pacid=37470694 locus=PGSC0003DMG400009295 ID=PGSC0003DMT400024026.v4.03 annot-version=v4.03
Sequence

ATGGTAGCAAAGCAGTTAGATGACGAACCTCAAACCCTCACAAATTCAGCAAACTATGAA
TCCAAATCTCACAAGAAACAGAAGAGAAAGCTCGAAGACCCTGAGGTTGAAGAAGTTGTT
GTAGAATCCAAAAAAGAGAAAAAGAAGAAGAAGAAGCAGAAACAGAAGCAAGAAGAAGAA
GGATCTAATGGGAACACTGAAACTCTTGATGGGTCGAATGGAAATACTGAAATATTTGAT
GGGTCAGCTGAGTTATCTGAAAAGAAGAAGTCGAAGAAGGAGAAGAAGAGTAAGGTAAAT
GAAGGGAATTTGGATGATGGGTCTGATGTTAGTGTTGTTAATGGGGAGGTTAAAGAAAGT
AGTACAAATGTGGTGGTTACTGGTAAGGGTGCTAATGAGTCAAAGTACAAAGCTTTAGAA
AAGTTTGTGGATGCAGGGCTTCCAAGTGAGGTGTTGGAATGTTGTAAGAATTTTGAGAAA
CCATCACCAATTCAATCTCATTCCTGGCCTTTTCTTTTAGATGGACGTGATTTCATTGGG
ATAGCTAGAACTGGATCAGGTAAGACGTTGGCTTTTGGTATTCCGGCTATAATGCACATC
ACGAGTAAGCGGAAGAGTAAAAAGTCTAAGAATCCTGTTTGCCTTGTACTTTCGCCTACA
AGGGAGTTAGCTCAACAAATATCAGATGTTCTTTGTGAGGCTGGGAAGCCTACTGGTGTG
CAGTCAGTTTGTCTATATGGCGGAGTTGATAAGCACCATCAAAAGGCTTCTCTTAGATCT
GGCGTGGATATTGTTATTGGAACCCCTGGTCGTTTGCAAGATCTGATGGAAATGGGAGCT
TGCAATTTAAAAGAGGTTTCTTTTGTGGTGCTAGATGAAGCTGATCGCATGCTTGATTTA
GGTTTTGAACCAGCGGTCCGTGCCATATTGAGCCAAACATGCTCTGTTCGGCAGATGGTT
ATGTTCAGTGCTACATGGCCTCTGGAAGTTCATCAATTAGCTCAAGAGTTCATGGATCCC
AATCCAATCAAGGTAGTTGTAGGTTCAGAAGATTTGGCTGCCAACCACGATGTCATGCAA
ATTGTTGAGGTCTTGGAAGATCGAGCACGGGATGAGCGTTTACAATGTTTGCTGGAAAAA
TACCACAAGTCTAGAAGGAATAGAGTATTGGTTTTTGTTTTATACAAGAAGGAAGCATCT
CGTGTTGAAATGATGCTACAGAAAAGGGGTTGGAAAGTTGTCTCCATTAGTGGTGACAAG
CAACAACATGCTCGTACTAAGGCCCTGTCACTCTTCAAGGATGGAAGCTGTCCTCTACTG
ATAGCTACTGATGTAGCTGCTCGAGGGCTTGATATACCTGATGTTGAAGTTGTGATAAAT
TATAGTTTCCCTTTGACAACAGAGGATTATGTTCATAGAATTGGAAGAACTGGAAGGGCT
GGTAAAAAAGGTGTAGCTCATACATTTTTCACCAAGGATAACAAGGGACTTTCTGGGGAG
TTGATAAATGTCCTCAGAGAAGCTGGACAGACTGTTCCAGCTGCCCTTCTTAACTTTGGA
ACCCATGTAAAGAAAAAGGAGTCCAAGCTCTATGGTGCTCATTTTAGAGAAATTGATGCA
AATGCTCCAAAGGCCACCAAAATAAAATTTGGCGATTCTGATAATGAAGATTGA