Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400023985
CDS Infomation

pacid=37464375 polypeptide=PGSC0003DMP400016360 locus=PGSC0003DMG400009278 ID=PGSC0003DMT400023985.v4.03 annot-version=v4.03
Sequence

ATGCAGAAACTGTTAAGCAGAAACCCATCGTTACCGCCTCCAGTTCTATCCCTTAATCCC
CTTCTTTCTTTACCTCTTTCTCATCCCATAGGGTTTTACAAACACCCACTTGCTCCCAGT
CCTAGAATGACTTCTGCCGCCCTCCACCGGCTTCACCATCCCACTTTCGGTAAACCCTTT
TCGGGTTTCCGGAATTTGTCTACGGATTCTTCTGGAAAGGCAGTTGTTCCTCGTAGTGGT
AATAATTGCCGTATTTGTAGATGCTCTCTTGATACTGCGACAGTGAGGGCTTGGGTTGTT
TTGAAGCAGAGTAGAACTAGTGCTGCCTGGTTCGGCACTCTGGCTTCGGCTTCTGGGTCA
GAGAAGGGTGTTCCAGTGACTTCTGCTGAGGAGGTGGAGGATTTCGAAAGTGGGGTTGAG
GATAAAGAGGAGAATGTGAGTGCCTCGGAGGAGAAGCCCGGGTTGCATAGGAGGCAGAGG
AGTGGTGGTGGTGGTGGGGAAGGAGGGGTTATGGCTAGTCCAGATTTGCTAACAATACCG
GGTGTTGGGCCTAGGAATTTGAGGAAGCTGGTGCAGAAGGGTTTTATGGGTGTTGATCAA
CTCAAACAGCTCTACAGAGATAAGTTTTTTGGAAAATCCAACGAGAAGATGGTTGAGTTC
TTACAAAGCTCAGTTGGAATCATTCACAGAAACCATGCTGAGAGTATCACCTCGTATATC
AGAAAGAGCGTGGATGAAGAGTTGAAGGAGAATAACTCAGATTCCAATGTAAAGTCAGCA
CAAAAGAAACGACTTACTTTCTGTGTTGAGGGAAATATTAGTGTTGGAAAAACAACCTTT
CTGCAGAGAATAGCTAATGAGACACTTGAATTGCAAGATCTTGTTGAAATAGTTCCCGAA
CCCATTGCCAAGTGGCAGGATATTGGGCCAGATCACTTTAACATATTAGATGCATTCTAT
GCGGAACCACAAAGATATGCTTACACATTTCAGAACTATGTTTTTGTAACGAGAGTTATG
CAGGAGAGAGAATCATCTGGTGGTATCAGGCCCCTCAGGTTGATGGAGAGAAGTGTGTTC
AGTGACAGGATGGTCTTTGTGAGAGCTGTTCATGAAGCAAACTGGATGAATGAGATGGAG
ATCAGCATTTATGACTCATGGTTTGACCCGGTTGTTTCAACTTTGCCTGGACTGATTCCC
GATGGTTTTATTTATCTTAGAGCAAGCCCTGATACATGTCACAAGAGAATGATGTTGCGT
AAGAGAACAGAGGAAGGTGGAGTTTCCTTGGAATATCTGCGAGGGTTGCATGAGAAGCAT
GAAAGCTGGCTTTTCCCATTTGAAAGTGGAAATCATGGGGTATTGTCTGTCAGCGAGCTA
CCCCTAAACTTTGACAAATCTGTACCCCCAGAAATAAGGGATCGTGTTTTTTATCTGGAG
GGCAATCACATGCACCCAAGTATTCAAAAGGTTCCTGCGTTGGTTCTTGACTGCGAGCCT
AACATTGACTTTAACAAAGATATTGAAGCAAAGAGGCAGTATGCTCGTCAAGTTGCTGAT
TTTTTTGAATTCGTAAAAAAGAAGAAAGAAGTCACGCCAGGAGCTGGAGAAGAACAGCCT
AAGGGCAATCAAGCACCAGTGTTGCTGCCTCAAAATGGAGGTCTGTGGGTACCTGGTGGC
AAGTTCTCGGAATCGGCACTGAACTTGGATTTCAGACGAAATATGTCATTCATGTCTCAC
TAG

Peptide Sequence

PEP ID

PGSC0003DMP400016360
PEP Infomation

pacid=37464375 transcript=PGSC0003DMT400023985 locus=PGSC0003DMG400009278 ID=PGSC0003DMT400023985.v4.03 annot-version=v4.03
Sequence

MQKLLSRNPSLPPPVLSLNPLLSLPLSHPIGFYKHPLAPSPRMTSAALHRLHHPTFGKPF
SGFRNLSTDSSGKAVVPRSGNNCRICRCSLDTATVRAWVVLKQSRTSAAWFGTLASASGS
EKGVPVTSAEEVEDFESGVEDKEENVSASEEKPGLHRRQRSGGGGGEGGVMASPDLLTIP
GVGPRNLRKLVQKGFMGVDQLKQLYRDKFFGKSNEKMVEFLQSSVGIIHRNHAESITSYI
RKSVDEELKENNSDSNVKSAQKKRLTFCVEGNISVGKTTFLQRIANETLELQDLVEIVPE
PIAKWQDIGPDHFNILDAFYAEPQRYAYTFQNYVFVTRVMQERESSGGIRPLRLMERSVF
SDRMVFVRAVHEANWMNEMEISIYDSWFDPVVSTLPGLIPDGFIYLRASPDTCHKRMMLR
KRTEEGGVSLEYLRGLHEKHESWLFPFESGNHGVLSVSELPLNFDKSVPPEIRDRVFYLE
GNHMHPSIQKVPALVLDCEPNIDFNKDIEAKRQYARQVADFFEFVKKKKEVTPGAGEEQP
KGNQAPVLLPQNGGLWVPGGKFSESALNLDFRRNMSFMSH*

Transcript Sequence

Transcript ID

PGSC0003DMT400023985
Transcript Infomation

pacid=37464375 locus=PGSC0003DMG400009278 ID=PGSC0003DMT400023985.v4.03 annot-version=v4.03
Sequence

ATGCAGAAACTGTTAAGCAGAAACCCATCGTTACCGCCTCCAGTTCTATCCCTTAATCCC
CTTCTTTCTTTACCTCTTTCTCATCCCATAGGGTTTTACAAACACCCACTTGCTCCCAGT
CCTAGAATGACTTCTGCCGCCCTCCACCGGCTTCACCATCCCACTTTCGGTAAACCCTTT
TCGGGTTTCCGGAATTTGTCTACGGATTCTTCTGGAAAGGCAGTTGTTCCTCGTAGTGGT
AATAATTGCCGTATTTGTAGATGCTCTCTTGATACTGCGACAGTGAGGGCTTGGGTTGTT
TTGAAGCAGAGTAGAACTAGTGCTGCCTGGTTCGGCACTCTGGCTTCGGCTTCTGGGTCA
GAGAAGGGTGTTCCAGTGACTTCTGCTGAGGAGGTGGAGGATTTCGAAAGTGGGGTTGAG
GATAAAGAGGAGAATGTGAGTGCCTCGGAGGAGAAGCCCGGGTTGCATAGGAGGCAGAGG
AGTGGTGGTGGTGGTGGGGAAGGAGGGGTTATGGCTAGTCCAGATTTGCTAACAATACCG
GGTGTTGGGCCTAGGAATTTGAGGAAGCTGGTGCAGAAGGGTTTTATGGGTGTTGATCAA
CTCAAACAGCTCTACAGAGATAAGTTTTTTGGAAAATCCAACGAGAAGATGGTTGAGTTC
TTACAAAGCTCAGTTGGAATCATTCACAGAAACCATGCTGAGAGTATCACCTCGTATATC
AGAAAGAGCGTGGATGAAGAGTTGAAGGAGAATAACTCAGATTCCAATGTAAAGTCAGCA
CAAAAGAAACGACTTACTTTCTGTGTTGAGGGAAATATTAGTGTTGGAAAAACAACCTTT
CTGCAGAGAATAGCTAATGAGACACTTGAATTGCAAGATCTTGTTGAAATAGTTCCCGAA
CCCATTGCCAAGTGGCAGGATATTGGGCCAGATCACTTTAACATATTAGATGCATTCTAT
GCGGAACCACAAAGATATGCTTACACATTTCAGAACTATGTTTTTGTAACGAGAGTTATG
CAGGAGAGAGAATCATCTGGTGGTATCAGGCCCCTCAGGTTGATGGAGAGAAGTGTGTTC
AGTGACAGGATGGTCTTTGTGAGAGCTGTTCATGAAGCAAACTGGATGAATGAGATGGAG
ATCAGCATTTATGACTCATGGTTTGACCCGGTTGTTTCAACTTTGCCTGGACTGATTCCC
GATGGTTTTATTTATCTTAGAGCAAGCCCTGATACATGTCACAAGAGAATGATGTTGCGT
AAGAGAACAGAGGAAGGTGGAGTTTCCTTGGAATATCTGCGAGGGTTGCATGAGAAGCAT
GAAAGCTGGCTTTTCCCATTTGAAAGTGGAAATCATGGGGTATTGTCTGTCAGCGAGCTA
CCCCTAAACTTTGACAAATCTGTACCCCCAGAAATAAGGGATCGTGTTTTTTATCTGGAG
GGCAATCACATGCACCCAAGTATTCAAAAGGTTCCTGCGTTGGTTCTTGACTGCGAGCCT
AACATTGACTTTAACAAAGATATTGAAGCAAAGAGGCAGTATGCTCGTCAAGTTGCTGAT
TTTTTTGAATTCGTAAAAAAGAAGAAAGAAGTCACGCCAGGAGCTGGAGAAGAACAGCCT
AAGGGCAATCAAGCACCAGTGTTGCTGCCTCAAAATGGAGGTCTGTGGGTACCTGGTGGC
AAGTTCTCGGAATCGGCACTGAACTTGGATTTCAGACGAAATATGTCATTCATGTCTCAC
TAG