Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400023883
CDS Infomation

pacid=37465761 polypeptide=PGSC0003DMP400016293 locus=PGSC0003DMG400009235 ID=PGSC0003DMT400023883.v4.03 annot-version=v4.03
Sequence

ATGCTAATGATACAGTCCACCATTTCACCTCCCCTGCAAAAATCTGTTCTTGTTCCAGCT
AAAACTGCAACAAGTTGGAGTAAACATGGCTGTTTTCTTGATTTAAATGGTGGGTGTGGT
TCAAAATCAGCTTCTTATCACTTTCCAAGAAGACCCATTAAGGGAAATTCAATTCAGCTG
AAGATTTATGCAAGGAAATCAGAATCATTCCCAATTTTGCTTTCAGAGAAAGTTGATGAA
TTGCCAGAGAAGTTGCTGAATGGCGGAGATATTACTATTAGTAGTGGACAGGTTCTTTCT
CTATCTGCTATCTCATGTGGGTCTATCTTCTGGTTGACATCTGGGCAAGTGGCATCAGCA
AGTGAAGGTGTCAGAGTAAATATGGTTTATGAGGTCGGAGAGTTATTTGAACTGGGAATC
CAGCTTACTTACCTGCTTTTACTACTAGCATTGCTTGGGGTTGGGAGTTTCTTTGTGATT
CGGCAAGTCCTTGTTCGCAGAGAGCTTGATCTTTCTGCCAAAGAATTGCAAGAGCAAGTT
AGAAGTGGTGATGCCAGTGCGACAGAGCTTTTTGAACTTGGAGCTGTGATGTTGAGGAGA
AAATTCTACCCAGCTGCTACCAAGTTCCTTCTTCAGGCAGTAGAAAAGTGGGATGGAGAT
GATCAGGATCTTGCCCAAGTTTACAATGCCCTTGGTGTCAGTTATGTACTTGATGGGAAA
ATTGACAAAGGAATTGCTCAGTTTGAGAATGCTGTAAAAGTTCAACCTGGTTATGTCACG
GCATGGAACAACCTTGGTGATGCGTATGAGAAAACCAAAGACTTAACATCTGCTCTAAAT
GCATTTGAAGAGGTACTTCTTTTTGATCCTAACAACAAAATAGCTCGTCCTAGGCGCGAT
GCATTGAAGGACAAAGTAACAATGTACAAAGGAGTATCGGTGAAATCTAAGAAGAGTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400016293
PEP Infomation

pacid=37465761 transcript=PGSC0003DMT400023883 locus=PGSC0003DMG400009235 ID=PGSC0003DMT400023883.v4.03 annot-version=v4.03
Sequence

MLMIQSTISPPLQKSVLVPAKTATSWSKHGCFLDLNGGCGSKSASYHFPRRPIKGNSIQL
KIYARKSESFPILLSEKVDELPEKLLNGGDITISSGQVLSLSAISCGSIFWLTSGQVASA
SEGVRVNMVYEVGELFELGIQLTYLLLLLALLGVGSFFVIRQVLVRRELDLSAKELQEQV
RSGDASATELFELGAVMLRRKFYPAATKFLLQAVEKWDGDDQDLAQVYNALGVSYVLDGK
IDKGIAQFENAVKVQPGYVTAWNNLGDAYEKTKDLTSALNAFEEVLLFDPNNKIARPRRD
ALKDKVTMYKGVSVKSKKS*

Transcript Sequence

Transcript ID

PGSC0003DMT400023883
Transcript Infomation

pacid=37465761 locus=PGSC0003DMG400009235 ID=PGSC0003DMT400023883.v4.03 annot-version=v4.03
Sequence

ATGCTAATGATACAGTCCACCATTTCACCTCCCCTGCAAAAATCTGTTCTTGTTCCAGCT
AAAACTGCAACAAGTTGGAGTAAACATGGCTGTTTTCTTGATTTAAATGGTGGGTGTGGT
TCAAAATCAGCTTCTTATCACTTTCCAAGAAGACCCATTAAGGGAAATTCAATTCAGCTG
AAGATTTATGCAAGGAAATCAGAATCATTCCCAATTTTGCTTTCAGAGAAAGTTGATGAA
TTGCCAGAGAAGTTGCTGAATGGCGGAGATATTACTATTAGTAGTGGACAGGTTCTTTCT
CTATCTGCTATCTCATGTGGGTCTATCTTCTGGTTGACATCTGGGCAAGTGGCATCAGCA
AGTGAAGGTGTCAGAGTAAATATGGTTTATGAGGTCGGAGAGTTATTTGAACTGGGAATC
CAGCTTACTTACCTGCTTTTACTACTAGCATTGCTTGGGGTTGGGAGTTTCTTTGTGATT
CGGCAAGTCCTTGTTCGCAGAGAGCTTGATCTTTCTGCCAAAGAATTGCAAGAGCAAGTT
AGAAGTGGTGATGCCAGTGCGACAGAGCTTTTTGAACTTGGAGCTGTGATGTTGAGGAGA
AAATTCTACCCAGCTGCTACCAAGTTCCTTCTTCAGGCAGTAGAAAAGTGGGATGGAGAT
GATCAGGATCTTGCCCAAGTTTACAATGCCCTTGGTGTCAGTTATGTACTTGATGGGAAA
ATTGACAAAGGAATTGCTCAGTTTGAGAATGCTGTAAAAGTTCAACCTGGTTATGTCACG
GCATGGAACAACCTTGGTGATGCGTATGAGAAAACCAAAGACTTAACATCTGCTCTAAAT
GCATTTGAAGAGGTACTTCTTTTTGATCCTAACAACAAAATAGCTCGTCCTAGGCGCGAT
GCATTGAAGGACAAAGTAACAATGTACAAAGGAGTATCGGTGAAATCTAAGAAGAGTTGA