Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400023881
CDS Infomation

pacid=37467137 polypeptide=PGSC0003DMP400016291 locus=PGSC0003DMG400009234 ID=PGSC0003DMT400023881.v4.03 annot-version=v4.03
Sequence

ATGGATCCTGACGACGGTCTAAGTGAAGATCCTTGGATAAAGTCTTCTTCGTCTGGCAAT
GAATTGCTGAAAATTATGCCCTCAGATAACCATTCATTTACCAATTTAAATCTGCATGCG
CAGAAGTGGGAAGGTTCCTCTTATTTGGATCAACAAAACAGGATTGAGCAACAGTTTTCT
GGATTTGCTAAACCGAAACACACATCTGAGATGGATCAACAGGGGCATCAGAGGAATGAA
AATCATGACACGACCAGAATACATGACTGGGATCCAAGAGCTTTGCTGAACAACCTTTCG
TTTCTCGAACAAAAGATTCATCAGCTCCAGGAGCTGGTGCATTTGATTGTTGGGCGGAGA
GGTCAAGATGGGGTTCAGGGAAATGACCTTATAGTTCAGCAACAACAGTTAATCACAGCT
GATCTTACCTCTATTATAGTCCAATTGATATCAACTGCAGGAAGTCTTCTTCCAACTATG
AAGCACACACTTTCCTCTGCGATCCCTGCTGCCAGCCAGCTTGGGCAGGCTGGTGGTGTC
ACAGTTTCTTCTACAGCAGGTACTAGTGCTGGTGGGCTGACATGTAATGACAGTGTTGCG
AAGGTGGAAGATCAGTCCAACCATGTTGACCAGTTGAGAGATTGTGGGATTGAACACAAT
CATGCTGCCGATGAACATGAATTAAAAGATGAAGATGAAGCTGAGGAAGAAGAGAACCTT
CCTCCCGGTTCCTATGAGATTCTACAATTGGAAAAGGAGGAAATCCTTGCACCACACACT
CACTTTTGCACAATTTGTGGCAAGGGATTTAAGAGGGATGCCAATTTGCGGATGCACATG
AGAGGTCATGGAGATGAGTACAAGACTCCAGCAGCTCTTGCAAAGCCTCATAAAGAACCC
AGTTCTGAGCCAATACTCATCAAAAGGTATTCCTGTCCTTATGTTGGATGCAAGCGCAAT
AAGGAGCATAAAAAATTTCAACCTCTTAAGACGATCTTATGTGTGAAAAACCATTACAAG
AGAACCCACTGTGAGAAAGCCTATACTTGCAGTAGATGTAATATTAAGAAATTTTCAGTA
ATTGCTGATCTTAAAACACATGAAAAGCATTGTGGAAAGGATAAGTGGCTTTGTTCCTGT
GGAACAACATTTTCTAGGAAAGACAAGCTTTTTGGACACATTTCCCTTTTTCAAGGTCAT
ACTCCTGCAGTTTCTCCGGATGAAACTAAAGGATCTGCTGGGACATCTGACCGGGGCCAA
ACCAGTGAAGTCACCATGAAAGCTCGACAAGAAAACTATAAGGTAAATGCTTCACATGGC
AATGAGTTTCAAAAACCCGGGGTTCTAAAAGAGTGTCCATACAATCCAAGCAGTTATTAC
TCACCTTTGAACTTTGATACTAGCAATCTTAATGGTTTTCAAGAGTTCCCTCGACCACCA
TTTGATGAGTCAGATAGCTCATTCTCATTTCTGCTATCTGGATCATGTGAATACCCTCCT
CACAAGGCTGCAAAATTTATGAGTTCTAGTGAAATGGAATAA

Peptide Sequence

PEP ID

PGSC0003DMP400016291
PEP Infomation

pacid=37467137 transcript=PGSC0003DMT400023881 locus=PGSC0003DMG400009234 ID=PGSC0003DMT400023881.v4.03 annot-version=v4.03
Sequence

MDPDDGLSEDPWIKSSSSGNELLKIMPSDNHSFTNLNLHAQKWEGSSYLDQQNRIEQQFS
GFAKPKHTSEMDQQGHQRNENHDTTRIHDWDPRALLNNLSFLEQKIHQLQELVHLIVGRR
GQDGVQGNDLIVQQQQLITADLTSIIVQLISTAGSLLPTMKHTLSSAIPAASQLGQAGGV
TVSSTAGTSAGGLTCNDSVAKVEDQSNHVDQLRDCGIEHNHAADEHELKDEDEAEEEENL
PPGSYEILQLEKEEILAPHTHFCTICGKGFKRDANLRMHMRGHGDEYKTPAALAKPHKEP
SSEPILIKRYSCPYVGCKRNKEHKKFQPLKTILCVKNHYKRTHCEKAYTCSRCNIKKFSV
IADLKTHEKHCGKDKWLCSCGTTFSRKDKLFGHISLFQGHTPAVSPDETKGSAGTSDRGQ
TSEVTMKARQENYKVNASHGNEFQKPGVLKECPYNPSSYYSPLNFDTSNLNGFQEFPRPP
FDESDSSFSFLLSGSCEYPPHKAAKFMSSSEME*

Transcript Sequence

Transcript ID

PGSC0003DMT400023881
Transcript Infomation

pacid=37467137 locus=PGSC0003DMG400009234 ID=PGSC0003DMT400023881.v4.03 annot-version=v4.03
Sequence

ATGGATCCTGACGACGGTCTAAGTGAAGATCCTTGGATAAAGTCTTCTTCGTCTGGCAAT
GAATTGCTGAAAATTATGCCCTCAGATAACCATTCATTTACCAATTTAAATCTGCATGCG
CAGAAGTGGGAAGGTTCCTCTTATTTGGATCAACAAAACAGGATTGAGCAACAGTTTTCT
GGATTTGCTAAACCGAAACACACATCTGAGATGGATCAACAGGGGCATCAGAGGAATGAA
AATCATGACACGACCAGAATACATGACTGGGATCCAAGAGCTTTGCTGAACAACCTTTCG
TTTCTCGAACAAAAGATTCATCAGCTCCAGGAGCTGGTGCATTTGATTGTTGGGCGGAGA
GGTCAAGATGGGGTTCAGGGAAATGACCTTATAGTTCAGCAACAACAGTTAATCACAGCT
GATCTTACCTCTATTATAGTCCAATTGATATCAACTGCAGGAAGTCTTCTTCCAACTATG
AAGCACACACTTTCCTCTGCGATCCCTGCTGCCAGCCAGCTTGGGCAGGCTGGTGGTGTC
ACAGTTTCTTCTACAGCAGGTACTAGTGCTGGTGGGCTGACATGTAATGACAGTGTTGCG
AAGGTGGAAGATCAGTCCAACCATGTTGACCAGTTGAGAGATTGTGGGATTGAACACAAT
CATGCTGCCGATGAACATGAATTAAAAGATGAAGATGAAGCTGAGGAAGAAGAGAACCTT
CCTCCCGGTTCCTATGAGATTCTACAATTGGAAAAGGAGGAAATCCTTGCACCACACACT
CACTTTTGCACAATTTGTGGCAAGGGATTTAAGAGGGATGCCAATTTGCGGATGCACATG
AGAGGTCATGGAGATGAGTACAAGACTCCAGCAGCTCTTGCAAAGCCTCATAAAGAACCC
AGTTCTGAGCCAATACTCATCAAAAGGTATTCCTGTCCTTATGTTGGATGCAAGCGCAAT
AAGGAGCATAAAAAATTTCAACCTCTTAAGACGATCTTATGTGTGAAAAACCATTACAAG
AGAACCCACTGTGAGAAAGCCTATACTTGCAGTAGATGTAATATTAAGAAATTTTCAGTA
ATTGCTGATCTTAAAACACATGAAAAGCATTGTGGAAAGGATAAGTGGCTTTGTTCCTGT
GGAACAACATTTTCTAGGAAAGACAAGCTTTTTGGACACATTTCCCTTTTTCAAGGTCAT
ACTCCTGCAGTTTCTCCGGATGAAACTAAAGGATCTGCTGGGACATCTGACCGGGGCCAA
ACCAGTGAAGTCACCATGAAAGCTCGACAAGAAAACTATAAGGTAAATGCTTCACATGGC
AATGAGTTTCAAAAACCCGGGGTTCTAAAAGAGTGTCCATACAATCCAAGCAGTTATTAC
TCACCTTTGAACTTTGATACTAGCAATCTTAATGGTTTTCAAGAGTTCCCTCGACCACCA
TTTGATGAGTCAGATAGCTCATTCTCATTTCTGCTATCTGGATCATGTGAATACCCTCCT
CACAAGGCTGCAAAATTTATGAGTTCTAGTGAAATGGAATAA