Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400023776
CDS Infomation

pacid=37460263 polypeptide=PGSC0003DMP400016225 locus=PGSC0003DMG400009196 ID=PGSC0003DMT400023776.v4.03 annot-version=v4.03
Sequence

ATGCCTCAAATTGATGGTGGTTTGATGTGGTTAGGCAAAGGAAGGATGATGACGGAGGTG
GAGGATACCGGCCGGTCACCAGTTACGTTTGCATGTTCTTCATCATCATCATCATCATCA
AGAAGAAGATCATACAATGCATTGTGTCTCATTTTCCTTGTTGTTGTTGTATCCTTGATC
ACATTTGTATCGGCTCAACCGGACGATGACGACACCGGCCCAGATGATCATCATTATCTT
CCCGATGCAAAGAGCTCTTCGGAGGCCCTCTTCAACTTTAAAAGCTCACTATCTACATCT
TCAGGTAAAGGAAAAGATGTTCTCGGGTCTTGGGTTCCATCGACAAGTCCCTGTACCGGG
AACAATGCCAATTGGTTGGGAGTAATTTGCTTCGAAGGGGATGTATGGGGTTTGCAACTA
GAAAACTTGGACCTCTCAGGTGCAATTGATATAGATTCATTGCTTCCTTTGCATTTCCTC
CGGACCCTAAGCTTTATGAACAACAACTTCAAGGGGGGAATGCCTGATTGGAACAAACTT
GGTGCCCTCAAGTCATTGTACTTGTCCAATAATAACTTCTCTGGTCAGATCCCCGATGAT
GCCTTCAAGGGTATGACTTATCTCAAGAAACTTTATTTGGCCAACAACCAATTCACTGGT
AACATTCCCACCTCCCTCGCTACCTCCTGCCCCAGGCTCTTCGAGTTGACCCTCGAAAAC
AACAAATTCACTGGCTCTATACCTGATTTCCGCCGTGGCCTTCTCAAACTCCTCAATGTA
TCCAACAACCAACTCGAGGGTCCAATCCCTCCTTCTCTTTCTTTAATGGATCCAACAACA
TTCGCAGGGAACAAAGGCATGTGTGGGAAGCCTTTGGAATCAGTTTGCAACTCCCCAATT
CCAGAAGCAAATACTACTACTCCGCCTAACAGTCTCAACTCTACCATCAGCACCCAATTA
TCTGGTGATATAAATAAGAAGTCTCCCTCTCTCCTGAGTAGAGTGATGTTGATCGTTGCA
GTTTGTTTGGTGGTCTTATGTCTCGTGATTGTGTTAATTCTTATCATTCGCCGCCGCAGC
AGCAGCCAAAATAATTCACAACTCACCAGCCGGGCTGTTGAGTCAAATAATATTGATGGG
GATCAAAACATGACCTTTTCATCATCAGCTCTTCCTGATATGACGATGAGCGGCAATCCA
ACTTATGCAAGACACGATAACAATAACAAGGCAGTAGAGGCACCACCAGCAGCAGCAGCA
CCAGGCGCAACGGTGGTGGGTAAGTTGTCCTTCGTTAGAGATGACAGGACAAGATTTGAT
CTACAGGACTTGCTAAGAGCATCCGCGGAGGTGCTTGGCAGTGGGAACCTGGGGTCCTCT
TACAAGGCACTACTTATGGATGGCCAAGCCGTTGTGGTGAAGAGGTTTAAGCAAATGAAC
CATGTCGCTAAAGAAGACTTCCACGAGCACATGAGGAGGTTGGGCAGACTAAGCCACCCG
AACCTACTCCCCCTTGTCGCCTATTATTATAGGAAAGAAGAGAAGCTGCTTGTTTATGAC
TATGCCTCCAATGGTAGCTTGGCCAGTCACCTCCATGGCAATCACTCTAGGCTGGACTGG
TCAAGCCGCTTGAAAATCATAAAAGGAGTTGCAAAGGCGTTGGCCTACCTTCACAATGAG
CTGCCAAGCCTAGCACTTCCGCATGGTCACCTCAAGTCATCAAATGTACTTCTGGACAAA
TATTCTAATCCGTTGTTGATGGATTACACATTGGTGCCCCTGGTGAATCTTTCCCAAGTC
CAACATCTTCTAGTGGCTTACAAAGCTCCCGAGTATGCACAACAAGGCCGCATCACAAGG
AAGACTGATGTTTGGAGCCTTGGGATTCTAATACTAGAGACCCTCACCGGTAAACTCCCA
ACAAACTACCTTGCTCTCAGCACTGGCTATGGCACCGAATTGGCTACCTGGGTCGACACC
ATCATTAAAGATAATGAATCGGCTTTTGACAAAGAGATGGACCAGCTCACTCATCAAGGA
CAGATCCAAAAGCTCTTCAACATTGGAGTGGCTTGCTGTCAAGAAGATTTGGATACAAGG
TGGGATCTCAAGGAAGCTATTGAAAGTATACAAGCCTTAAATGACAAGGTCGACGATCAA
GTTGATGTTGGATTTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400016225
PEP Infomation

pacid=37460263 transcript=PGSC0003DMT400023776 locus=PGSC0003DMG400009196 ID=PGSC0003DMT400023776.v4.03 annot-version=v4.03
Sequence

MPQIDGGLMWLGKGRMMTEVEDTGRSPVTFACSSSSSSSSRRRSYNALCLIFLVVVVSLI
TFVSAQPDDDDTGPDDHHYLPDAKSSSEALFNFKSSLSTSSGKGKDVLGSWVPSTSPCTG
NNANWLGVICFEGDVWGLQLENLDLSGAIDIDSLLPLHFLRTLSFMNNNFKGGMPDWNKL
GALKSLYLSNNNFSGQIPDDAFKGMTYLKKLYLANNQFTGNIPTSLATSCPRLFELTLEN
NKFTGSIPDFRRGLLKLLNVSNNQLEGPIPPSLSLMDPTTFAGNKGMCGKPLESVCNSPI
PEANTTTPPNSLNSTISTQLSGDINKKSPSLLSRVMLIVAVCLVVLCLVIVLILIIRRRS
SSQNNSQLTSRAVESNNIDGDQNMTFSSSALPDMTMSGNPTYARHDNNNKAVEAPPAAAA
PGATVVGKLSFVRDDRTRFDLQDLLRASAEVLGSGNLGSSYKALLMDGQAVVVKRFKQMN
HVAKEDFHEHMRRLGRLSHPNLLPLVAYYYRKEEKLLVYDYASNGSLASHLHGNHSRLDW
SSRLKIIKGVAKALAYLHNELPSLALPHGHLKSSNVLLDKYSNPLLMDYTLVPLVNLSQV
QHLLVAYKAPEYAQQGRITRKTDVWSLGILILETLTGKLPTNYLALSTGYGTELATWVDT
IIKDNESAFDKEMDQLTHQGQIQKLFNIGVACCQEDLDTRWDLKEAIESIQALNDKVDDQ
VDVGF*

Transcript Sequence

Transcript ID

PGSC0003DMT400023776
Transcript Infomation

pacid=37460263 locus=PGSC0003DMG400009196 ID=PGSC0003DMT400023776.v4.03 annot-version=v4.03
Sequence

ATGCCTCAAATTGATGGTGGTTTGATGTGGTTAGGCAAAGGAAGGATGATGACGGAGGTG
GAGGATACCGGCCGGTCACCAGTTACGTTTGCATGTTCTTCATCATCATCATCATCATCA
AGAAGAAGATCATACAATGCATTGTGTCTCATTTTCCTTGTTGTTGTTGTATCCTTGATC
ACATTTGTATCGGCTCAACCGGACGATGACGACACCGGCCCAGATGATCATCATTATCTT
CCCGATGCAAAGAGCTCTTCGGAGGCCCTCTTCAACTTTAAAAGCTCACTATCTACATCT
TCAGGTAAAGGAAAAGATGTTCTCGGGTCTTGGGTTCCATCGACAAGTCCCTGTACCGGG
AACAATGCCAATTGGTTGGGAGTAATTTGCTTCGAAGGGGATGTATGGGGTTTGCAACTA
GAAAACTTGGACCTCTCAGGTGCAATTGATATAGATTCATTGCTTCCTTTGCATTTCCTC
CGGACCCTAAGCTTTATGAACAACAACTTCAAGGGGGGAATGCCTGATTGGAACAAACTT
GGTGCCCTCAAGTCATTGTACTTGTCCAATAATAACTTCTCTGGTCAGATCCCCGATGAT
GCCTTCAAGGGTATGACTTATCTCAAGAAACTTTATTTGGCCAACAACCAATTCACTGGT
AACATTCCCACCTCCCTCGCTACCTCCTGCCCCAGGCTCTTCGAGTTGACCCTCGAAAAC
AACAAATTCACTGGCTCTATACCTGATTTCCGCCGTGGCCTTCTCAAACTCCTCAATGTA
TCCAACAACCAACTCGAGGGTCCAATCCCTCCTTCTCTTTCTTTAATGGATCCAACAACA
TTCGCAGGGAACAAAGGCATGTGTGGGAAGCCTTTGGAATCAGTTTGCAACTCCCCAATT
CCAGAAGCAAATACTACTACTCCGCCTAACAGTCTCAACTCTACCATCAGCACCCAATTA
TCTGGTGATATAAATAAGAAGTCTCCCTCTCTCCTGAGTAGAGTGATGTTGATCGTTGCA
GTTTGTTTGGTGGTCTTATGTCTCGTGATTGTGTTAATTCTTATCATTCGCCGCCGCAGC
AGCAGCCAAAATAATTCACAACTCACCAGCCGGGCTGTTGAGTCAAATAATATTGATGGG
GATCAAAACATGACCTTTTCATCATCAGCTCTTCCTGATATGACGATGAGCGGCAATCCA
ACTTATGCAAGACACGATAACAATAACAAGGCAGTAGAGGCACCACCAGCAGCAGCAGCA
CCAGGCGCAACGGTGGTGGGTAAGTTGTCCTTCGTTAGAGATGACAGGACAAGATTTGAT
CTACAGGACTTGCTAAGAGCATCCGCGGAGGTGCTTGGCAGTGGGAACCTGGGGTCCTCT
TACAAGGCACTACTTATGGATGGCCAAGCCGTTGTGGTGAAGAGGTTTAAGCAAATGAAC
CATGTCGCTAAAGAAGACTTCCACGAGCACATGAGGAGGTTGGGCAGACTAAGCCACCCG
AACCTACTCCCCCTTGTCGCCTATTATTATAGGAAAGAAGAGAAGCTGCTTGTTTATGAC
TATGCCTCCAATGGTAGCTTGGCCAGTCACCTCCATGGCAATCACTCTAGGCTGGACTGG
TCAAGCCGCTTGAAAATCATAAAAGGAGTTGCAAAGGCGTTGGCCTACCTTCACAATGAG
CTGCCAAGCCTAGCACTTCCGCATGGTCACCTCAAGTCATCAAATGTACTTCTGGACAAA
TATTCTAATCCGTTGTTGATGGATTACACATTGGTGCCCCTGGTGAATCTTTCCCAAGTC
CAACATCTTCTAGTGGCTTACAAAGCTCCCGAGTATGCACAACAAGGCCGCATCACAAGG
AAGACTGATGTTTGGAGCCTTGGGATTCTAATACTAGAGACCCTCACCGGTAAACTCCCA
ACAAACTACCTTGCTCTCAGCACTGGCTATGGCACCGAATTGGCTACCTGGGTCGACACC
ATCATTAAAGATAATGAATCGGCTTTTGACAAAGAGATGGACCAGCTCACTCATCAAGGA
CAGATCCAAAAGCTCTTCAACATTGGAGTGGCTTGCTGTCAAGAAGATTTGGATACAAGG
TGGGATCTCAAGGAAGCTATTGAAAGTATACAAGCCTTAAATGACAAGGTCGACGATCAA
GTTGATGTTGGATTTTAA