Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400023748
CDS Infomation

pacid=37459017 polypeptide=PGSC0003DMP400016200 locus=PGSC0003DMG401009187 ID=PGSC0003DMT400023748.v4.03 annot-version=v4.03
Sequence

ATGGCTTCCGTGAAATCCTCTCGTTCAAGAGCTCATGCGGTCACTCAGTCTAAAGGAATC
AACAAGGATACCGGCCCCAAGCTCGAAGAAAATCTCAACGTCTTCAAATCCGACAATTTC
GATGCTGATGCCTTTGTCCAGTCCAAATGTCATTCTCTCAATGAGAAGGAAATAAGGCAG
CTGTGCTCTTATCTATTGGAACTGAAAAGGGCTTCTGCTGAGGAAATGCGCAGAAGTGTC
TATGCCAATTATACAGCTTTCATTCGCACATCAAAAGAGATCTCAGATTTGGAGGGTGAA
CTGTCATCCATGAAAAACTTGCTATCTACTCAGGCAACTTTAATTCATGGTTTAGCTGAG
GGAGTTCATATTGATTCTTTGTCTGATGTTGTTCCCGAGTCCACGTCTGATAGCTCTCCT
ACTGATGACATTAGGGAGCCTTCAGACCTAGAGAAGTGGCTTACGGAGTTTCCTGATCAC
CTAGATGTTCTATTAGCTGAAAGGAGAGTAGATGAAGCCTTGTTGAGTCTTGATGAAGGA
GAACGTGTAGCATCTGAAGCAAAAGAGAAGAAAACGTTAGGTCATGCTGTGCTGTTGTCA
CTACAAACTGCCATTGCTGAACGTAGGCAAAAGCTGGCTGATCAGCTTGCTGAAATTACC
TGTCAACCTTCTACTCGTGGTGCAGAGCTTCGTGCTGCTATTTCAGCTCTTAAAAAGCTC
GGGGATGGCCCCCGTGCTCATAGTTTGCTCCTTAATGCACATTACCAGAAATACCAATTC
AACATGAAAAATCTTCGTCCATCTAGCACCTCTTATGGAGGAGCTTATACTGCCACCCTT
TCACAGCTCGTATTCTCTGGCATTGCTCAAGCAGCCACCGATTCATTGGCTATTTTTGGT
GAAGAGCCAGCTTATACATCCGAACTGGTGATGTGGTCTACTAAGCAGACAGAGGCTTTT
GCACTTTTGGTCAAAAGACATGCATTAACTTCATCAGCAGCTGCTGGTGGCTTACGTGCT
GCTGCAGAATGTGTTCAAATAGCTTTAGGACACTGTTCCTTGTTGGAAGCTCGTGGACTT
GCACTTTGTCCTGTGCTTCTGAAGCTTTTTAGACCAAGTGTTGAGCAAGCGCTAGATGCC
AACTTAAAACGAATTGAAGAAAGCACTGCTGCTTTGGCTGCTGCTGATGATTGGGAACTC
ACATATCCACCGTCTGTTACACGCACATCCAGTAGGTCAGCCGGCGCTGTTCTTGGTTCT
ACAGGGGCATATCAGCATAAACTTTCAAGTAGTGCGCACCGATTCAATTTGATGGTTCAG
GATTTCTTTGAGGACGTGGGACCATTGCTAAGTATGCAGTTGGGAGGGAAAGCTTTGGAA
GGTCTATTTCAAGTGTTTAATACTTATGTGAACACACTTGTAAGAGCATTACCTGGCTCC
ATGGAGGAGGAAGCCAGCTTTGAAGATTCAGGGAATAAAATTGTTAGAATGGCCGAGACT
GAAGCTCAACAAATTGCTTTGCTTGCAAATGCATCTTTATTGGCGGACGAACTATTGCCA
CGTGCAGCTATGAAGCTTGCTCCCTTGGCTAATCAAAAGGATGATCTTCAACGAAGAGCT
TCAGATAGGCAAAGCCGTCACCCTGAGCAAAGGGAATGGAAAAAGCGTCTGGTGAACTCG
GTCGACCGATTAAAGGATAGCTTTTGTCAGCAACATGCCCTGGATCTTATTTTCACTGAG
GAAGGGGACAGCCATCTCACTGCAGAAATGTATATAAACATGGAGGGAAATGCAGATGAG
ATGGAATGGTCCCCTTCTCTAATATTCCAGGAACTTTATGTCAAACTAAACAGAATGGCT
GCCATAGCTGCTGATATGTTTGTAGGAAGGGAAAGATTTGCAATGTTGTTGTTGATGAGG
CTTACAGAAACTGTCATCTTGTGGCTTTCACAAGATCAGAGCTTTTGGGATGACATAGAG
GAAGGACCAAGGCCATTGGGTCATCTTGGTCTTCAGCAGTTCTATTTGGATATGAAGTTT
GTCACATGCTTTGCTTCGCAAGGACGCTACTTATCTAGAAATTTGCTTCGGGTTGTCAAT
GACATAATCTCTAAAGCAATGTCAGCCTTTGCTGCAACAGGGATGGATCCATATAGTGTT
CTCCCTGAGGATGAATGGTTTACTGAAATTGCTCAAGATGCGATGGAGAAGCTGAGTGGA
AAGCCCAAAGTTGCTAATGGGGAAAGGGACCTGAACAGTCCAACTGCCTCTGTCTCAGCC
CAATCTATGTCCTCTGTCAGATCTCACGGGAGTTCTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400016200
PEP Infomation

pacid=37459017 transcript=PGSC0003DMT400023748 locus=PGSC0003DMG401009187 ID=PGSC0003DMT400023748.v4.03 annot-version=v4.03
Sequence

MASVKSSRSRAHAVTQSKGINKDTGPKLEENLNVFKSDNFDADAFVQSKCHSLNEKEIRQ
LCSYLLELKRASAEEMRRSVYANYTAFIRTSKEISDLEGELSSMKNLLSTQATLIHGLAE
GVHIDSLSDVVPESTSDSSPTDDIREPSDLEKWLTEFPDHLDVLLAERRVDEALLSLDEG
ERVASEAKEKKTLGHAVLLSLQTAIAERRQKLADQLAEITCQPSTRGAELRAAISALKKL
GDGPRAHSLLLNAHYQKYQFNMKNLRPSSTSYGGAYTATLSQLVFSGIAQAATDSLAIFG
EEPAYTSELVMWSTKQTEAFALLVKRHALTSSAAAGGLRAAAECVQIALGHCSLLEARGL
ALCPVLLKLFRPSVEQALDANLKRIEESTAALAAADDWELTYPPSVTRTSSRSAGAVLGS
TGAYQHKLSSSAHRFNLMVQDFFEDVGPLLSMQLGGKALEGLFQVFNTYVNTLVRALPGS
MEEEASFEDSGNKIVRMAETEAQQIALLANASLLADELLPRAAMKLAPLANQKDDLQRRA
SDRQSRHPEQREWKKRLVNSVDRLKDSFCQQHALDLIFTEEGDSHLTAEMYINMEGNADE
MEWSPSLIFQELYVKLNRMAAIAADMFVGRERFAMLLLMRLTETVILWLSQDQSFWDDIE
EGPRPLGHLGLQQFYLDMKFVTCFASQGRYLSRNLLRVVNDIISKAMSAFAATGMDPYSV
LPEDEWFTEIAQDAMEKLSGKPKVANGERDLNSPTASVSAQSMSSVRSHGSS*

Transcript Sequence

Transcript ID

PGSC0003DMT400023748
Transcript Infomation

pacid=37459017 locus=PGSC0003DMG401009187 ID=PGSC0003DMT400023748.v4.03 annot-version=v4.03
Sequence

ATGGCTTCCGTGAAATCCTCTCGTTCAAGAGCTCATGCGGTCACTCAGTCTAAAGGAATC
AACAAGGATACCGGCCCCAAGCTCGAAGAAAATCTCAACGTCTTCAAATCCGACAATTTC
GATGCTGATGCCTTTGTCCAGTCCAAATGTCATTCTCTCAATGAGAAGGAAATAAGGCAG
CTGTGCTCTTATCTATTGGAACTGAAAAGGGCTTCTGCTGAGGAAATGCGCAGAAGTGTC
TATGCCAATTATACAGCTTTCATTCGCACATCAAAAGAGATCTCAGATTTGGAGGGTGAA
CTGTCATCCATGAAAAACTTGCTATCTACTCAGGCAACTTTAATTCATGGTTTAGCTGAG
GGAGTTCATATTGATTCTTTGTCTGATGTTGTTCCCGAGTCCACGTCTGATAGCTCTCCT
ACTGATGACATTAGGGAGCCTTCAGACCTAGAGAAGTGGCTTACGGAGTTTCCTGATCAC
CTAGATGTTCTATTAGCTGAAAGGAGAGTAGATGAAGCCTTGTTGAGTCTTGATGAAGGA
GAACGTGTAGCATCTGAAGCAAAAGAGAAGAAAACGTTAGGTCATGCTGTGCTGTTGTCA
CTACAAACTGCCATTGCTGAACGTAGGCAAAAGCTGGCTGATCAGCTTGCTGAAATTACC
TGTCAACCTTCTACTCGTGGTGCAGAGCTTCGTGCTGCTATTTCAGCTCTTAAAAAGCTC
GGGGATGGCCCCCGTGCTCATAGTTTGCTCCTTAATGCACATTACCAGAAATACCAATTC
AACATGAAAAATCTTCGTCCATCTAGCACCTCTTATGGAGGAGCTTATACTGCCACCCTT
TCACAGCTCGTATTCTCTGGCATTGCTCAAGCAGCCACCGATTCATTGGCTATTTTTGGT
GAAGAGCCAGCTTATACATCCGAACTGGTGATGTGGTCTACTAAGCAGACAGAGGCTTTT
GCACTTTTGGTCAAAAGACATGCATTAACTTCATCAGCAGCTGCTGGTGGCTTACGTGCT
GCTGCAGAATGTGTTCAAATAGCTTTAGGACACTGTTCCTTGTTGGAAGCTCGTGGACTT
GCACTTTGTCCTGTGCTTCTGAAGCTTTTTAGACCAAGTGTTGAGCAAGCGCTAGATGCC
AACTTAAAACGAATTGAAGAAAGCACTGCTGCTTTGGCTGCTGCTGATGATTGGGAACTC
ACATATCCACCGTCTGTTACACGCACATCCAGTAGGTCAGCCGGCGCTGTTCTTGGTTCT
ACAGGGGCATATCAGCATAAACTTTCAAGTAGTGCGCACCGATTCAATTTGATGGTTCAG
GATTTCTTTGAGGACGTGGGACCATTGCTAAGTATGCAGTTGGGAGGGAAAGCTTTGGAA
GGTCTATTTCAAGTGTTTAATACTTATGTGAACACACTTGTAAGAGCATTACCTGGCTCC
ATGGAGGAGGAAGCCAGCTTTGAAGATTCAGGGAATAAAATTGTTAGAATGGCCGAGACT
GAAGCTCAACAAATTGCTTTGCTTGCAAATGCATCTTTATTGGCGGACGAACTATTGCCA
CGTGCAGCTATGAAGCTTGCTCCCTTGGCTAATCAAAAGGATGATCTTCAACGAAGAGCT
TCAGATAGGCAAAGCCGTCACCCTGAGCAAAGGGAATGGAAAAAGCGTCTGGTGAACTCG
GTCGACCGATTAAAGGATAGCTTTTGTCAGCAACATGCCCTGGATCTTATTTTCACTGAG
GAAGGGGACAGCCATCTCACTGCAGAAATGTATATAAACATGGAGGGAAATGCAGATGAG
ATGGAATGGTCCCCTTCTCTAATATTCCAGGAACTTTATGTCAAACTAAACAGAATGGCT
GCCATAGCTGCTGATATGTTTGTAGGAAGGGAAAGATTTGCAATGTTGTTGTTGATGAGG
CTTACAGAAACTGTCATCTTGTGGCTTTCACAAGATCAGAGCTTTTGGGATGACATAGAG
GAAGGACCAAGGCCATTGGGTCATCTTGGTCTTCAGCAGTTCTATTTGGATATGAAGTTT
GTCACATGCTTTGCTTCGCAAGGACGCTACTTATCTAGAAATTTGCTTCGGGTTGTCAAT
GACATAATCTCTAAAGCAATGTCAGCCTTTGCTGCAACAGGGATGGATCCATATAGTGTT
CTCCCTGAGGATGAATGGTTTACTGAAATTGCTCAAGATGCGATGGAGAAGCTGAGTGGA
AAGCCCAAAGTTGCTAATGGGGAAAGGGACCTGAACAGTCCAACTGCCTCTGTCTCAGCC
CAATCTATGTCCTCTGTCAGATCTCACGGGAGTTCTTGA